Dcol002024.1
Basic Information
- Insect
- Drosophila colorata
- Gene Symbol
- dsx
- Assembly
- GCA_035041545.1
- Location
- JAWNLD010000077.1:547705-551655[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-24 5.2e-21 74.2 10.4 2 47 30 75 29 75 0.97 2 2 5 1.7e+04 -14.9 12.0 12 20 132 140 126 146 0.55
Sequence Information
- Coding Sequence
- ATGTCCGACTCGGACATGCTCGACTCGAAGAACGATGTGTGCGGCGGCGCGTCCAGCTCCAGCGGCAGCTCAATCTCGCCGCGCACTCCGCCCAACTGTGCGCGTTGCCGCAACCACGGCCTCAAGATCACGCTGAAGGGCCACAAGCGGTACTGCAAGTACCGCTATTGCACCTGCGAGAAGTGCCGCCTCACCGCCGACCGACAGCGCGTGATGGCGCTGCAGACGGCGCTGCGCCGCGCCCAGGCGCAGGACGAGCAGCGCTCGCTGCACATGCACGAGGTGCCGCCGCCGGCGGGCTCCACCTCGGCGCTGCTCAGCCACCATGGCGGCCATCACCATCACGTGCACGGCcacggccacgcccatgcccacgcccacagtcacggccacgcccatgcGCATCACACCCACGGCCACGGACATGGCCATCATGGCCACGTGCTGCACCACCAGCAGGCAGCGGCCTCGGCAGCGGCACCTCCGCCGCAGCCGCCGTCACATCTGGGAGCCGCACAcaacggccacgcccacacgcaCCCCCACGTGCATCACGCCCACTTggcagccgccgctgccgcttcGGTGgtgcagcatcagcagcagcagcagcaccaccagcaacagccgcaCCACCAGACATCTCTTCGATCTCCCTCGCACAGCGATCACGGCGCTGCCACCAGCAGCTCTGGAGGCGGTGGCGCCACATCCAGCAATGTGGCAGCTGCCTCAAgcagcgccgccagcagcagtggcagcactGCAGGAGGAGTAGGAGGAGGAGGCAGCGGTAGCGGCGGCATCAGCGTCATAACCAGCGCCGACCATCACATGTCTACGGTGCCAACGCCCGCACAGTCGCTGGAAGGCTCCTGCGACTCATCCTCGCCGTCGCCATCGTCCACCTCGGGCAACGCCCATCTGCCCATCTCCGTGTCCACCACACGCAAAAATGCGTCGTTAGTGGTTCGGCAGGAGCAAGAGCAAGAGCAGGAGCAGGTTGAGGGCTCCACGGCCAATCGATAG
- Protein Sequence
- MSDSDMLDSKNDVCGGASSSSGSSISPRTPPNCARCRNHGLKITLKGHKRYCKYRYCTCEKCRLTADRQRVMALQTALRRAQAQDEQRSLHMHEVPPPAGSTSALLSHHGGHHHHVHGHGHAHAHAHSHGHAHAHHTHGHGHGHHGHVLHHQQAAASAAAPPPQPPSHLGAAHNGHAHTHPHVHHAHLAAAAAASVVQHQQQQQHHQQQPHHQTSLRSPSHSDHGAATSSSGGGGATSSNVAAASSSAASSSGSTAGGVGGGGSGSGGISVITSADHHMSTVPTPAQSLEGSCDSSSPSPSSTSGNAHLPISVSTTRKNASLVVRQEQEQEQEQVEGSTANR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00598172; iTF_00561054; iTF_00567555; iTF_00547374;
- 90% Identity
- -
- 80% Identity
- -