Basic Information

Insect: Drosophila burlai
Gene Symbol: -
Assembly: GCA_008042655.1
Location: VNJT01008425.1:108322-110768[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2 1.5e+02 3.2 0.1 1 9 189 197 189 202 0.86

2 7 0.012 0.96 10.1 4.4 1 23 481 503 481 503 0.96

3 7 5.8e-06 0.00045 20.6 2.5 1 23 509 531 509 531 0.98

4 7 6.1e-06 0.00046 20.5 1.4 1 23 537 560 537 560 0.97

5 7 2.1e-06 0.00016 22.0 2.9 1 23 566 588 566 588 0.97

6 7 6e-06 0.00046 20.6 0.7 1 23 594 616 594 616 0.98

7 7 5.7e-06 0.00044 20.6 0.6 1 23 622 644 622 644 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2	1.5e+02	3.2	0.1	1	9	189	197	189	202	0.86
2	7	0.012	0.96	10.1	4.4	1	23	481	503	481	503	0.96
3	7	5.8e-06	0.00045	20.6	2.5	1	23	509	531	509	531	0.98
4	7	6.1e-06	0.00046	20.5	1.4	1	23	537	560	537	560	0.97
5	7	2.1e-06	0.00016	22.0	2.9	1	23	566	588	566	588	0.97
6	7	6e-06	0.00046	20.6	0.7	1	23	594	616	594	616	0.98
7	7	5.7e-06	0.00044	20.6	0.6	1	23	622	644	622	644	0.98

Sequence Information

Coding Sequence: ATGGAGCGCAAGGAAGTGGACCAACAGTTCATGGATCACTCTCTCCTCGCCACGGAGCTGATGCGCGATCCGAATCAAATCATAATGGATCTCATAGATCACACCTACAAGTCGGAAGAAGCCACCAATCTCTGCACGAATGCCGTGCACGGGAGCCACCATCCCGCTGGCTCCGCCTACGCGGATGTGGAAATCAAGGACACGCTGACGCCGGAATCCCTCAACACAATTTTCCAGTTTGTAAACAAATCCTCGTCTTCGCCGGAAAGTgtagagcagcagcagcagcagcagcagcaagagctTAACCAGCCTGCATTTCCTTCTCTGGCTAACATTGAGCCCACCATACCCGTGCCCAtcatggaggaggagctgctgtaTGCCTCCTCCGCCTGCATGAATGCCCGCAAAGTGCTGCCCCACAAGAAGCGCATCTCGCGGAAGCTCAAGGGCAACATGGACAACGAGTTGATGgtggtggagcagcagcagcagcagcggcagcacaaGGAGCTCGTGCAGGAGGAGCTCGTGCCAGATGTGCCGGGCTCTGCGGCGCTCTACAGCTGTGAGATCTGCGGCTATGCGCTCCAACAGGAACAAGCCAAGCTGGACCAAGTCTTTCACGATGTCCAACTGAACTTTGAGAACTTCCACAACATCAGccaccatcatcaccatcaccatgtgcacgacgacgacgatgacgccAACGATGTGGGCGTCAACATGGTGTTGCCTGGCCAAGCCGCGGATAAACTCAGTCCCGTTGTGGTGAATGCCACGCCCAATCCCATACCCTCCGTGGCGGTGGTGGACGATGACGTGGAGTTCAGCGACACGGAGGACATGCTGGAAGGCATACGGAATGTGGTGGACAAGGTGTCCATAGAGGACACCTGCGATGAGCTTGTAGATCTGGAGTTAACCTCCAGTGGCATGACGGCTCCCTggtttaataataactttagGGACATCACCTTTCCCGCGCTGCTGTTGCCTGGagaaccaccaccaccaccgtcGTCGACGGGTTCAGCTTCACTGCCAGCTCCTGCCCTGCTCAAGGAGATGGATTTCCTCAGTGCCGAAGACGGAGTCCCCAAGGCGGACACCAAAATGGAGAGACCTCTGCCCAAGGCTAGCAGCGAGGATATGGAACAGACTTTGCTGGTGGCGCCGCCATCACCTCAGGTCCCTGCTCCTCCCCATCATCATCCCAACTCAAACTCCTCCATTGAGCAACTGCGTCGGTCTCCCTTGATGCTCAGCGAAGGCTTCAAATTGGAGGAAGACGACAGCAGGCCACCGTCTCCCTTCGACGAAGAAGAAGATGGTGGAGACCACCAAGAGACTGATGACCACCCAGAGAGCTTCTCGTTGGCAGGACTAGAAACCAGTGTGTCCGAGGAAGCGCAAGGAAAGGCAAGGAGAAAGCACTTTTGTGACAAGTGCAGTCGCGACTTTAACTCGTACAACGCCCTGAAGTACCACCAATATACACACAATCAGCAGAGATCCCACAAATGCGAGAGCTGCGAGAGATCCTTCTACACGCAGAGTGCTCTCAAGGCGCATGAAAGAACACATTCCGGCGTGAAGCCATTTAAATGCGAAAAATGTGACTTTAAATTCCGGCAATGGGGCGATCTCAAGTACCACATCATCTCCCGGCACAGCGACATCAAGGCCCACATGTGCGAGTTCTGCGGCAAGAGCTTCTCGCGGCGCTATTCCCTCGTCCTGCATCGCCGGATTCACACCAGCGAGCGGAACTATGCCTGCCAGTATTGCGAGAAGACCTTTCGCGCCAGCTCCTATCTGTTGAGTCACATCAAAGTGCACACGGGGGAGCGCCCGTACGAGTGTTTGATTTGCGAGAAGAAGTTCCGGGTTTCGGGGGACCTCAAGCGGCATTCCCGCATCCACGATCCCTCGAGAAACGGGCAGGGTGCCCTGGAAAAGGGGAGGAAGAAGGAGAAGGCAGTGGCAGCtggtaataataaaatacaggATCAACAGGACGACAGCCACACACAAAACCACAAGTCTGAGCGGGAAATACTGGGCTCATAG
Protein Sequence: MERKEVDQQFMDHSLLATELMRDPNQIIMDLIDHTYKSEEATNLCTNAVHGSHHPAGSAYADVEIKDTLTPESLNTIFQFVNKSSSSPESVEQQQQQQQQELNQPAFPSLANIEPTIPVPIMEEELLYASSACMNARKVLPHKKRISRKLKGNMDNELMVVEQQQQQRQHKELVQEELVPDVPGSAALYSCEICGYALQQEQAKLDQVFHDVQLNFENFHNISHHHHHHHVHDDDDDANDVGVNMVLPGQAADKLSPVVVNATPNPIPSVAVVDDDVEFSDTEDMLEGIRNVVDKVSIEDTCDELVDLELTSSGMTAPWFNNNFRDITFPALLLPGEPPPPPSSTGSASLPAPALLKEMDFLSAEDGVPKADTKMERPLPKASSEDMEQTLLVAPPSPQVPAPPHHHPNSNSSIEQLRRSPLMLSEGFKLEEDDSRPPSPFDEEEDGGDHQETDDHPESFSLAGLETSVSEEAQGKARRKHFCDKCSRDFNSYNALKYHQYTHNQQRSHKCESCERSFYTQSALKAHERTHSGVKPFKCEKCDFKFRQWGDLKYHIISRHSDIKAHMCEFCGKSFSRRYSLVLHRRIHTSERNYACQYCEKTFRASSYLLSHIKVHTGERPYECLICEKKFRVSGDLKRHSRIHDPSRNGQGALEKGRKKEKAVAAGNNKIQDQQDDSHTQNHKSEREILGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00490302; iTF_00488896;
90% Identity: -
80% Identity: -