Basic Information

Insect: Drosophila bocqueti
Gene Symbol: -
Assembly: GCA_018151655.1
Location: JAECXF010000002.1:19312493-19314973[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.23 17 6.0 0.2 2 20 177 195 176 197 0.92

2 7 0.012 0.92 10.1 4.4 1 23 508 530 508 530 0.96

3 7 5.7e-06 0.00043 20.5 2.5 1 23 536 558 536 558 0.98

4 7 5.9e-06 0.00045 20.5 1.4 1 23 564 587 564 587 0.97

5 7 2e-06 0.00015 22.0 2.9 1 23 593 615 593 615 0.97

6 7 5.8e-06 0.00044 20.5 0.7 1 23 621 643 621 643 0.98

7 7 5.5e-06 0.00042 20.6 0.6 1 23 649 671 649 671 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.23	17	6.0	0.2	2	20	177	195	176	197	0.92
2	7	0.012	0.92	10.1	4.4	1	23	508	530	508	530	0.96
3	7	5.7e-06	0.00043	20.5	2.5	1	23	536	558	536	558	0.98
4	7	5.9e-06	0.00045	20.5	1.4	1	23	564	587	564	587	0.97
5	7	2e-06	0.00015	22.0	2.9	1	23	593	615	593	615	0.97
6	7	5.8e-06	0.00044	20.5	0.7	1	23	621	643	621	643	0.98
7	7	5.5e-06	0.00042	20.6	0.6	1	23	649	671	649	671	0.98

Sequence Information

Coding Sequence: ATGGAGCGCAAGGAAGTGGACCAACAGTTCATGGATCACTCTCTCCTTGCCACGGAGCTGATGCGCGATCCGAATCAGATCATAATGGATCTCATAGATCACACCTACAAGTCGGAAGAGGCCACCAACCTCTGCACGAATGCCGTGCACGGGAGCCACCATCCCGCTGGCTCCGCCTACGCGGATGTGGAAATCAAGGACACTCTGACGCCGGAATCCCTCAACACAATTTTCCAGTTTGTAAACAAATCCTCGTCCTCGCCGGAAAGCGTAGAGCAGCAGCAGCATCAGCAGCAGCAAGAGATTAACCAGCAGCCCGCATTTCCCTCTCTGGCTAACATTGAGCCCACCATACCCGTGCCCATCATGGAGGAGGAGCTGCTGTATGCCTCCTCCGCCTGCATGAATGCCCGCAAAGTGCTGCCCCACAAGAAGCGCATCTCGCGGAAGCTCAAGGGCAACATGGACAACGAGTTGCTGGTGGTGGAGCAGCAGCAGCAGCAGCAGCGCAGCAGCAGCACAAGGAGCTCCTGTGAGATCTGCGGCTATGCGGTGCACACGCAGTTGGACTTCTTTGCCCACCTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGTGCGGCTTGTCAGCTCAAGATAAGCTCCAACAGGAACAAGCCAAACTGGACCAAGTCTTTCACGATGTCCAACTGAACTTTGAGAACTTCCACAACATCAGCCACCACCATCATCACCATGTGCACGACGATGACGACGCCAACGATGTGGGCGTCAACATGGTGCTGCCTGGCCAAGCCGCGGATAAACTCAACGATGACGTGGAGTTCAGCGACACGGAGGACATGCTGGAGGGCATACGGAATGTGGTGGACAAGGTGTCCATAGAGGACACCTGCGATGAGCTTGTAGACCTGGAGTTAACCTCCAGTGGCATGACGGCTCCCTGGTTTAATAACAACTTTAGGGACATCACCTTTCCGGCCCTGCTGTTGCCTGGAGAACCACCACCACCACCGTCATCGGCGGGTTCAGCTTCTCTGCCAGCTCCTGCCCTGCTCAAGGAGATGGATTTCCTGAGTTCCGAAGACGGAGTCCCCCCCAAGACAGACCCCAAAATGGAGAGACCTCTGCCCAAGGCTAGCAGCGAGGATATGGAACAGACTTTGCTGGTGGCGCCGCCATCACCTCAGGTTCCTGCTCCTCCCCATCATCATCCCAACTCAAACTCCTCCATTGAGCAACTGCGTCGGTCTCCCTTGATGCTCAGCGAAGGCTTCAAATTGGAGGAAGACGACAGCCGGCCACCGTCTCCCTTCGACGACGAAGAAGATGGTGGAGATCACCAAGAGACTGATGACCACCCAGAGAGCTTCTCGTTGGCAGGGGGACTAGAAACCAGTGTGTCCGAGGAAGCGCAAGGAAAGGCAAGGAGAAAGCACTTTTGTGACAAGTGCAGTCGCGACTTCAACTCGTACAACGCCCTGAAGTACCACCAATACACACACAATCAGCAGAGATCCCACAAGTGCGAGAGCTGCGAGAGATCCTTCTACACGCAGAGTGCTCTCAAGGCGCATGAAAGAACACATTCCGGCGTGAAGCCATTTAAATGCGAAAAATGTGACTTTAAATTCCGGCAATGGGGCGATCTCAAGTACCACATCATCTCCCGGCACAGCGACATCAAGGCCCACATGTGCGAGTTCTGCGGCAAGAGCTTCTCGCGGCGCTACTCCCTCGTCCTGCATCGGCGGATTCACACCAGCGAGCGGAACTATGCCTGCCAGTATTGCGAGAAGACCTTTCGCGCCAGCTCCTATCTGTTGAGTCACATCAAAGTGCACACGGGGGAGCGCCCGTACGAGTGTTTGATTTGCGAGAAGAAGTTCCGGGTTTCGGGGGACCTCAAGCGGCATTCCCGCATCCACGATCCCTCGAGAAACGGGCAGGGTGCCCTGGAAAAGGGGAAGAAGAAGGAGAAGGCAGTGGCAGCTAGTAATAGTAAAATACAGGATCAACAGGACGACAGCCACACACAAAACCACAAGTCTGAGCGGGAAATACTGGGCTCATAG
Protein Sequence: MERKEVDQQFMDHSLLATELMRDPNQIIMDLIDHTYKSEEATNLCTNAVHGSHHPAGSAYADVEIKDTLTPESLNTIFQFVNKSSSSPESVEQQQHQQQQEINQQPAFPSLANIEPTIPVPIMEEELLYASSACMNARKVLPHKKRISRKLKGNMDNELLVVEQQQQQQRSSSTRSSCEICGYAVHTQLDFFAHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMCGLSAQDKLQQEQAKLDQVFHDVQLNFENFHNISHHHHHHVHDDDDANDVGVNMVLPGQAADKLNDDVEFSDTEDMLEGIRNVVDKVSIEDTCDELVDLELTSSGMTAPWFNNNFRDITFPALLLPGEPPPPPSSAGSASLPAPALLKEMDFLSSEDGVPPKTDPKMERPLPKASSEDMEQTLLVAPPSPQVPAPPHHHPNSNSSIEQLRRSPLMLSEGFKLEEDDSRPPSPFDDEEDGGDHQETDDHPESFSLAGGLETSVSEEAQGKARRKHFCDKCSRDFNSYNALKYHQYTHNQQRSHKCESCERSFYTQSALKAHERTHSGVKPFKCEKCDFKFRQWGDLKYHIISRHSDIKAHMCEFCGKSFSRRYSLVLHRRIHTSERNYACQYCEKTFRASSYLLSHIKVHTGERPYECLICEKKFRVSGDLKRHSRIHDPSRNGQGALEKGKKKEKAVAASNSKIQDQQDDSHTQNHKSEREILGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00492479;
90% Identity: -
80% Identity: -