Basic Information

Insect: Drosophila burlai
Gene Symbol: -
Assembly: GCA_008042655.1
Location: VNJT01018669.1:50818-54444[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.099 7.6 7.3 6.1 2 23 350 372 349 372 0.95

2 17 1 79 4.1 0.1 1 23 379 404 379 404 0.92

3 17 0.034 2.6 8.8 2.2 2 23 415 436 415 436 0.93

4 17 0.042 3.2 8.5 0.1 3 23 477 498 476 498 0.95

5 17 0.0052 0.4 11.3 0.6 3 23 506 526 504 526 0.95

6 17 0.011 0.82 10.3 0.1 1 23 534 557 534 557 0.98

7 17 0.0061 0.47 11.1 0.3 2 23 562 583 561 583 0.97

8 17 0.00026 0.02 15.4 0.7 1 22 631 652 631 655 0.91

9 17 0.35 27 5.6 1.4 3 21 662 680 662 681 0.90

10 17 0.016 1.2 9.8 0.2 1 23 700 725 700 725 0.96

11 17 0.049 3.8 8.2 1.5 2 23 743 765 742 765 0.93

12 17 0.0023 0.17 12.5 0.2 2 23 771 793 770 793 0.92

13 17 0.0027 0.21 12.2 0.2 2 23 797 819 796 819 0.95

14 17 3.3e-05 0.0025 18.2 0.6 1 23 825 847 825 847 0.97

15 17 0.0086 0.66 10.6 0.9 1 23 851 874 851 874 0.93

16 17 9.8e-06 0.00075 19.9 0.9 1 23 880 903 880 903 0.97

17 17 7.1e-05 0.0055 17.2 0.2 2 23 908 935 907 935 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.099	7.6	7.3	6.1	2	23	350	372	349	372	0.95
2	17	1	79	4.1	0.1	1	23	379	404	379	404	0.92
3	17	0.034	2.6	8.8	2.2	2	23	415	436	415	436	0.93
4	17	0.042	3.2	8.5	0.1	3	23	477	498	476	498	0.95
5	17	0.0052	0.4	11.3	0.6	3	23	506	526	504	526	0.95
6	17	0.011	0.82	10.3	0.1	1	23	534	557	534	557	0.98
7	17	0.0061	0.47	11.1	0.3	2	23	562	583	561	583	0.97
8	17	0.00026	0.02	15.4	0.7	1	22	631	652	631	655	0.91
9	17	0.35	27	5.6	1.4	3	21	662	680	662	681	0.90
10	17	0.016	1.2	9.8	0.2	1	23	700	725	700	725	0.96
11	17	0.049	3.8	8.2	1.5	2	23	743	765	742	765	0.93
12	17	0.0023	0.17	12.5	0.2	2	23	771	793	770	793	0.92
13	17	0.0027	0.21	12.2	0.2	2	23	797	819	796	819	0.95
14	17	3.3e-05	0.0025	18.2	0.6	1	23	825	847	825	847	0.97
15	17	0.0086	0.66	10.6	0.9	1	23	851	874	851	874	0.93
16	17	9.8e-06	0.00075	19.9	0.9	1	23	880	903	880	903	0.97
17	17	7.1e-05	0.0055	17.2	0.2	2	23	908	935	907	935	0.85

Sequence Information

Coding Sequence: ATGTCGGAAAACCAGGAAAACAATAGCTGCCTGCATTGTAGTGTTTTCAATACGAAATACCAGTACCAGGAGATCTTCGATGAGTTCGGCAAGGAGCTGGGCCTGCAATCGCTGCTGGCCAAGCACTTCCAGCTGGATGTGGCGCCCGATCCGCGAAAAAGGCAGCTACTTTGCCAAGTCTGCGTCAACATGCTCATCCGGCTGTTCGATATCGATGAATTGCAGCGCCAACAGGATGCGGCGAAGGCCCGAGGAAGGACCGAGGTGCCAAGCCGCCCTGAGGCGTCCCAAGAAACCGTTCATCCGGTCTCCCCTGAATCTAAGCCTGCACCCGCTGAAGTCGCTTGCAAGAAGGACAAGACTACGAAGTCCGTAGcggctgctccttctcctccgcctTCCACCAGGGAACCAAGTGCCCGGATCAGCAAGAGAGTTCCGCCACCTCAGGTATTGCCTGCTCCATGCAAACCTTCTGGGCGCGCCAAGGAGATTGTGAAGCCCAACAAGGAAACAGCGCCCGCCAAGAAACCCAACCAGGACACAGCGCGCGGCAAGAAAACATCGCCCGCCAAGCCAAAGGACACTGAACAGGAGCATATCAGTGTCCTCATACAAAACCTCCTCGACGAAGATGAGGCCATGTGCGAGGCAGTGGCAGACGTAGCTGAGCCCATATGTGAGGAAGTAGAAGCAATCGAGGCTGCTCCCATGCCCGAAGAGCCGCACACCCAAAGGAAAATGGTCCTGTTGAACAAGAGAGCGGCGCGCCAGCCTAGTCTGGATGAAGATATCTATATATACGAGCAAGATGatATTTTGGAGCCAGCTGTGGAGAAGGCAAAGATCGATGCCAAGGGTCGAGCATCAGCTAAGGTAACCGTTCTAGCGGAGGAGAGCCAGAGTGAGGGAGAAACCGAAGAGAGTCACGTGGTTCTCTTTGATTTTGTTATGATCAAAGAAAAGGATGAAATAGCTGACATAGCCGAGTACTTGTCCACGGTGGTGAAGACCAGCTTTGAGAAGCTGACCTTTGAATGGCCCACGGTGTGCAAACATTGTTTCCACAAGTTCACCACCTTTGAGAGTCTTCTGAGTCATACGCTCAAGTCGCACAAATCCCGGGGTAATGCCTACAAGTGTCCCATTGATGGCTGCAGCAAGGAATTGAAGGGCACCAAATTTCTGGCTATGCATCTGGTGGTTTTGCATGCTCCCGTTGCTGAAATCCCCATTTATGGCAGCTGTCCGGAGTGCAAGATGACTTTCTCCAACATTTTGCAGTACAACAAACACTCTTGCGCGCATTTGATCAAAAAGAAGCGCGGTGTCCGCTTATTTTGTGAAATGTGTGCGCAGGAGTTTCCCTCCTGGAAGCGtttcaatttccACAATCAATTCCATCTAGAGAAGCATAGGCCTCGCGCCTGCTTTGTCTGTGATTATGCCAGCACCAACATCGATGAGCTCTTCCAGCACCTAAACTACGCCCATGAGCCGGTGGGGACCTTGTTTTGCGATCTCTGCGATCGAACTTTTCGTGATTCCGCCGTTTTCATGGAGCACAATAAGTCGCATGCCAATGTAAGCAGCACTACGTACACCTGCGGCGAATGCATGGCGGTATTTGAGTCACGAGGTCGCCTAACTGGACACATGcGCTCCATCCATGGCAGCGTTATTAGCTGCGAGCTCTGTTCTCGCGAGTTTGGCAGCGAGGCCACCTACAGTATTCACATGAAGAAGCATCTAATTATCGAGCGGGATCTGTACGTTTGCCAGAATTGCGGCCTGCTGAACGATAGCGAAGAAAAGATGGCTGAACATGCTGAAACCAAGAATTCACCCTGTTTTGGAGCCAAGATATATACGGAGTTGCTGCGGGATGCCTATGTCTGCGAATACTGTTCTTCGTACTTTAAGCAAAAGTCCGATTTGCAAGCCCATCGCACGTCGGGAATCCATAAGAATGGATTGTTTTGGTGCCAGCCGTGTGGCAAGGATTTTCCCCACATGAAACTGTACCGCCATCACCTGCGCAACTTTCAGAAACTGCGAACGGATTCGACGCATCGGAAGCTGGAGATTTGTGTATTCTACATGTGCGATCAGCCGGACTGCCTGGAGGCCTATGTGAACTGGAACTCATTGTACACGCATAAGCGGCGCACCCACGAATCGTCGGACAAGCAGATAGAGAAGGCCTCAAAGTCCGGTCAGGATTGGATTTGCCAGTTCTGTTCGAAGGAGTGCCGTTCGAAGATGTCCTTGTCTGTTCATGTGGCACGAAGCCATAATAATGACAACGTCGTCTGTCCCTTGTGCAATGCCTCGTACAAGAGCCAGGATGCATTGGATAAGCACCATGCCTACTGGCATGAGCCCATCGAGTGCCCGGAGTGCTTTAAGACTGTTAAAAATCGTCGAAATTACGACACGCATGTTAATGTCGTGCATTCAAATAAGAAGCGCTATGCCTGCGGTGTTTGCGAGAAGGGATTCTATCATAAGAGCGAAATGGAGGCTCATCAAAGGCTCCATGGCCAGTTGTACAGCTGCGAACAGTGCAGCTTCACAACGAGGAACAAGAAGTCTCTGTCCGTTCATGTCCTGGGTCAGCACTACAAGCGTTTCGCCTTCGAGTGCAAGGTGTGCAACAAGAGATTCGGACGTCGCCAGGGCCTGACTACGCACATTCAGCGGGCTCACGGTTCCAAGTTCGTGTGCCGTGATTACTTCGAGGGCGGCTGCGGTCGCTCCTTCGTCAGCACTTCCCAGCTGAATGCTCACGTGAGAAAGGTGCACGAAGGCACTATTATtctgcaggaggaggaggaggaggaggaagagtaCAGCGATGGGCCCTCCACATCCAAGAAGCGCTGCTATCGCATTGACGATGATAGCAATATTGAGTTTGTAGAAATTGGAGACGGCGAGGATGAGGAAGAGGTtcaggatgaggaggaggagtatgaggaggaggagggagaggAATTTATTGACGAGACCCTGCCTGTTACTAAGCATTGA
Protein Sequence: MSENQENNSCLHCSVFNTKYQYQEIFDEFGKELGLQSLLAKHFQLDVAPDPRKRQLLCQVCVNMLIRLFDIDELQRQQDAAKARGRTEVPSRPEASQETVHPVSPESKPAPAEVACKKDKTTKSVAAAPSPPPSTREPSARISKRVPPPQVLPAPCKPSGRAKEIVKPNKETAPAKKPNQDTARGKKTSPAKPKDTEQEHISVLIQNLLDEDEAMCEAVADVAEPICEEVEAIEAAPMPEEPHTQRKMVLLNKRAARQPSLDEDIYIYEQDDILEPAVEKAKIDAKGRASAKVTVLAEESQSEGETEESHVVLFDFVMIKEKDEIADIAEYLSTVVKTSFEKLTFEWPTVCKHCFHKFTTFESLLSHTLKSHKSRGNAYKCPIDGCSKELKGTKFLAMHLVVLHAPVAEIPIYGSCPECKMTFSNILQYNKHSCAHLIKKKRGVRLFCEMCAQEFPSWKRFNFHNQFHLEKHRPRACFVCDYASTNIDELFQHLNYAHEPVGTLFCDLCDRTFRDSAVFMEHNKSHANVSSTTYTCGECMAVFESRGRLTGHMRSIHGSVISCELCSREFGSEATYSIHMKKHLIIERDLYVCQNCGLLNDSEEKMAEHAETKNSPCFGAKIYTELLRDAYVCEYCSSYFKQKSDLQAHRTSGIHKNGLFWCQPCGKDFPHMKLYRHHLRNFQKLRTDSTHRKLEICVFYMCDQPDCLEAYVNWNSLYTHKRRTHESSDKQIEKASKSGQDWICQFCSKECRSKMSLSVHVARSHNNDNVVCPLCNASYKSQDALDKHHAYWHEPIECPECFKTVKNRRNYDTHVNVVHSNKKRYACGVCEKGFYHKSEMEAHQRLHGQLYSCEQCSFTTRNKKSLSVHVLGQHYKRFAFECKVCNKRFGRRQGLTTHIQRAHGSKFVCRDYFEGGCGRSFVSTSQLNAHVRKVHEGTIILQEEEEEEEEYSDGPSTSKKRCYRIDDDSNIEFVEIGDGEDEEEVQDEEEEYEEEEGEEFIDETLPVTKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00593985;
90% Identity: iTF_00490222;
80% Identity: -