Dbur008070.1
Basic Information
- Insect
- Drosophila burlai
- Gene Symbol
- ttk
- Assembly
- GCA_008042655.1
- Location
- VNJT01008567.1:31540-35752[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-19 6.4e-16 57.9 0.0 2 45 363 407 362 407 0.97
Sequence Information
- Coding Sequence
- ATGTCGGTGCAGCAGTTCTGTCTGCGCTGGAACAACCACCAGCCGAACTTCATCTCGGTGTGCTCCTCCCTGCTGCACAATGGCACCCTGGTGGATGTCACCCTGGCCGCCGAGGGTCGCCAGCTGCAGGCGCACAAGATAGTCCTCTCCGCATGCAGTTCGTACTTTCAGGCTTTGTTCACCACAAATCCGTGCCAACATCCCATTGTTATCCTCAAGGACGTGCAGTACGATGACTTGAAGACCATGGTCGACTTTATGTACTATGGCGAGGTCAACGTGtcgcaggagcagctgccgcaCATCTTGAAAACCGCCGAAATGCTGAAGATCAAGGGTTTGGCGGAGATGCCCACGGATCCGGCCAATCTAACCAAATCCGATAGCAAGTCCTCCAGCGATGGCACCGAACGCAAGCGGCTGCGCAAATCCTCGAATAACGGCTCAGGCGAACGCAATAATGCAGAGGAGCAGCACCACAATAGCTCTCTGGACGCGGGCAGTGGCACCGGCAATGCCGGCCTCAGTCTTGCCCAGATGAGTCAGATGTCGTTCGGCGCTGGCGGTGGCCTCGCCGGTCATTCGTTGCACGCGGCAAAGCTGCTAAAGGAATCGGCGAATGCCGAGTTGGAGCAGCAACCGCAGGACTCTGATCTGGACGACGGCCATGGACACATACATATGCAAATTAAGCCCGAAGTGGATATTGGCGGCGTGAATCAAACGATGCCCCTCGACATCTCTGGCGCCACAACCCCATCCGAGCACGATGCGCCCAACTCGCAGTCGTCGCACTCGGGTCTGCAATGGACAGCGTATTCGTCGCAGATCATCACCGTGAACAACCTAGTCAGCGGATATGCGACGGCAGCCCAGAACCTATCCCCCACCTCGCCCAACGAATCGAACATGGTGCAATCGGTGTACAGCCAAGGACCGACGCCCACCCAATCGCCGGTGCACGCAGGCGGTGGAGCGGGTGGCGGAGGCGGCAACGCGGGTAACGCCAATGCTGGCAACGGCAACGCCACGGGAGCGGGAGCCAATCAAGTGGTGAAGCGCAAGAGATCTGTGAATCCGCAGGGCGATGAGAACTTTATCCGTGCCCTGGAGGCGGTGCGAACGGGAGGCATTGGCTTCTGCAAGGCTGCCCGGCTGTATGGCGTCAACAATCGAACCTTGTGGCTGGAGTACAAGAAGCGGGGCTACCCGGTGTCGAGGCCGAGCATCAAGGCGCGCGTGGTCAAGCAGGAGCCGAATCTGTCGCCGTCGCCCACACCGTCGACGAATCCCGGAGACGACACCACCGAAACGCTCAGCATGCAGATACCACCGCAGGCGGAAACACCGACGCCCTCCTCGCTCATGTGCACACCGCATCACGCGGGCATCGGCGGAGGCGGCAGTGGAGCTGGAAGTCTGCCCGGTGCAGGCAACTCGCATCCGGCCATCGGTGTTATGAGCCTATTCGATCCGCGGTACATGGACTCGCCGGGCAACGTTCACTCGATGTCACGGCAGCGCTACATCGACGCCACCGGCGGCGGGGCGGGCACTGGTGCGGGAGCGGGCGCGGGTGCCGGCACCATTAACGTCAATCCGACCACCGCCATGAATCTACAGAGTATTAACTTCAACTCGATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSSDGTERKRLRKSSNNGSGERNNAEEQHHNSSLDAGSGTGNAGLSLAQMSQMSFGAGGGLAGHSLHAAKLLKESANAELEQQPQDSDLDDGHGHIHMQIKPEVDIGGVNQTMPLDISGATTPSEHDAPNSQSSHSGLQWTAYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHAGGGAGGGGGNAGNANAGNGNATGAGANQVVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTETLSMQIPPQAETPTPSSLMCTPHHAGIGGGGSGAGSLPGAGNSHPAIGVMSLFDPRYMDSPGNVHSMSRQRYIDATGGGAGTGAGAGAGAGTINVNPTTAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00492303; iTF_00590163; iTF_00590307; iTF_00617722; iTF_00617558; iTF_00486491; iTF_00486633; iTF_00531579; iTF_00531727; iTF_00488734; iTF_00488586;
- 90% Identity
- iTF_00492303; iTF_00590163; iTF_00590307; iTF_00486491; iTF_00486633; iTF_00531579; iTF_00531727; iTF_00488734; iTF_00488586;
- 80% Identity
- iTF_00492303;