Dbun005154.1
Basic Information
- Insect
- Drosophila bunnanda
- Gene Symbol
- Ssb-c31a
- Assembly
- GCA_008042815.1
- Location
- VNKE01005519.1:162082-163491[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1 8.7e+03 -3.8 0.0 22 31 125 134 124 137 0.67 2 2 1.1e-20 9.4e-17 60.1 0.7 2 52 148 198 147 198 0.95
Sequence Information
- Coding Sequence
- ATGCCTAAAATTGAATCTATTGAGAAGCGCCAAAAAGTCaaaaaagtagaaaaagcTACCATAAAGACCGAAGTCGACGCAGAGCCTGAGGTGGTACTTAATCCATTAAAAGCTTCTGCTTTTGGTAAAGAAGTTAAAGCAGGCAGCTCTAAGTCGCCGGCTTTAAAGACCAAGAAGACTGACTCGATCCAGAATACCGTAGGTCTAAAGAAGTTAAAATCTGGAACACcgaaaaaagtagaaaaagcTACCACAAAGACCGAGGTCGACTCAGAGCCTCCATTAAAGGCTGCAAAGTTTGGTAAATTTGTTAAAGGAGGTGTGAAATCCCCCAAGTCGCCGGCTGTGAAGACCAAGAAGAAGACTGACTCGATCCGGGATATCTGCAAAAAAGACAAGAAGAAGTCGGCTTCTGGCGGTTCCCGCGGAGGTGGCCCCTGGATTCTGGAGAAGCTGCGTAAGGTGCGCATCTACGATTACAATGGCAAAAAGCTGGTAGACATTCGTAACTACTACGAGAAAGACGGAAAGGTTCTTCCCTGCAAGAGAGGCGTCATGATGCCGATCGACCAATGGAAGAAGCTTCTAGATATTGGCGACGAAGTCATCCGTGCAGCAGAGAATTAG
- Protein Sequence
- MPKIESIEKRQKVKKVEKATIKTEVDAEPEVVLNPLKASAFGKEVKAGSSKSPALKTKKTDSIQNTVGLKKLKSGTPKKVEKATTKTEVDSEPPLKAAKFGKFVKGGVKSPKSPAVKTKKKTDSIRDICKKDKKKSASGGSRGGGPWILEKLRKVRIYDYNGKKLVDIRNYYEKDGKVLPCKRGVMMPIDQWKKLLDIGDEVIRAAEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -