Dboq016731.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila bocqueti
Gene Symbol
RREB1
Assembly
GCA_018151655.1
Location
JAECXF010000129.1:5396255-5402531[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.033 2.5 8.7 0.8 1 21 268 288 268 290 0.93
2 12 0.00031 0.023 15.1 0.2 1 23 300 322 300 322 0.98
3 12 7.4e-05 0.0056 17.0 7.3 1 23 328 350 328 350 0.98
4 12 1.9 1.4e+02 3.1 3.7 2 19 586 603 586 605 0.97
5 12 0.0081 0.61 10.6 0.1 1 23 761 783 761 783 0.97
6 12 1.1e-05 0.00085 19.6 0.7 1 23 793 815 793 815 0.99
7 12 0.00076 0.058 13.8 2.0 1 23 821 844 821 844 0.97
8 12 0.0027 0.21 12.1 2.0 1 23 1139 1162 1139 1162 0.95
9 12 7.9e-05 0.006 16.9 0.3 2 23 1548 1569 1547 1569 0.97
10 12 0.13 10 6.8 6.3 1 23 1575 1598 1575 1598 0.97
11 12 0.0077 0.58 10.7 0.5 3 23 1815 1835 1813 1835 0.96
12 12 0.0013 0.097 13.1 4.8 1 23 1841 1863 1841 1863 0.99

Sequence Information

Coding Sequence
ATGCTCGCCACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGACCTGGTAGAGATGGAGCGTAAGCGAAGAGAGTCCACAACATCAGAATCCTCTCTCGAGCATCTCGACCTGGGACGAACGCCAAAGAAGCTCAGCGGCAGCGCCGGTGCTGCGCAGTCGACATCGACGCCGCACGAGGCGGCGGCAGCGACGTCGCGCAAGCGCAAGCTGCGCCAGCTGCAGCAGCAGCACCACCACCACCAGCAGAGTCGTTCGGATCTCCTTAGCGATGAGGATGAGGACGAGGAGGAGGAGGCACGTCCCCTCAATCGACACAAACAGCGACGAGGCGCCCAGGGGGGTTCCTCCTCCTCCGCCTCCGCCTCCATTGTGGTGGACTACTCCGCCGGTGATGCCAGTTCGCTGCGCAAAAAGTTCCGTCTCAATCGCTCGGCGACGACGGCGGCCAGTCTCTCGGAATCGGGATTCGTTGATGCCAGCAGCACTGCCCACAGTGGCTATCTGGGCAACAATAGCAGCAGCAGCGCCAGCACAAGCCTGGCAGTGCCTTCAACCGGTGGTGCCGCCGGTGGAGCAGCTCCCACCGCCTCCGCGTCCGCCTCGAGTAGCAGCACCAGCACAAGCAGCAGCCACAGCAGCTCCGGTGGCTCCTCACCGCAGGGCGGCCTGTGCCTGTCCAGCGGCGAGTCGGGCATTGGGGCCGGTGATGAGCACATGAAATACCTGTGCCCCATCTGCGAGGTGGTGTCCGCCACGCCGCACGAGTTCACCAATCACATTCGATGCCACAACTATGCCAATGGGGATACGGAGAACTTTACCTGCCGCATCTGCTCCAAGGTGTTATCTTCGGCCTCATCCCTGGACAGGCACGTGCTGGTTCATACGGGCGAGCGGCCGTTCAACTGCCGCTACTGCCACCTGACCTTCACCACCAATGGCAATATGCATCGCCATATGCGCACTCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCCTGAAGACGACCATCAACAACAATGTGATCGAGAACCATGCGGATGCGGATGAGGATCATCATCATCATCATCATCTGCATAACGAGGAAATGGAGGATGCCGATGCGGATGTGGCCATGCTGACAAGCACTCCGGATGTGGCCACACTGCTGGCCGGAGCCAGTGCCTCCGGTGCTGCCTCGCGTTCGCCCTCGCCCTCGCCACCGGGCTCGCCCGGCCTGCTACTGAGCTGCCCCGCCTGCGGAGCCCCCGATTTCGACAACCTGCCGGCTCTGTGCGCCCATCTGGATGCCCGGCACTCGGATATACCGGCCAAGTGCCGCGACTGTGAGGTGATATTTGCCAGCCATCGCCAGCTGCAGGCCCACTGCTGCCGCGGAGCCTCTGCCTTGGGCGTCGTGGGTCTGCCGCCCATGCTGGGTGCCAGCAGTTCGCCGCTGCATGCCGCCGACGAGGATGCCGAGGACGAGGAGGATCGGGATCGGGATCGGGAGGATCATGAGGACGACGACGATGAGGAGATGGAGCAAAAGCGTGATGACTTCTTCCACAAGCTGTACCTGAAGGGTACCGCGGGTGGAGCAGCGGGTGCGGCGGGCAACATCTCCCATCCGCCATCGCCCATCAAGCACGAGCCGGCGGACAGCAAGGATCTGGCCGATATACAGAGCATCCTGAACATGACCAGCTCCAGCTGCACCAGCAGCTTCCTGCGCAACTTCGAGCAGTCGGTGAACACGCCCAGCTCCAGCCAATACAGCCTGGATGGCCGTGACCAGGAGGAGGAGGCCCAGGACGCCTTCACCTCGGAGTTCCGGCGGATGAAGCTGCGCGGCGAGTTCCCCTGCAAACTCTGCTCGGCCGTCTTTCCGAATCTGCGCGCCCTCAAGGGTCACAATCGGGTGCATCTCGGGGCGGTCGGCCCTGCCGGACCCTTCCGCTGCAACATGTGTCCCTACGCCGTCTGCGACAAGGCGGCCCTCGTGCGGCACATGCGCACCCACAACGGCGACCGGCCGTACGAGTGCGCCGTCTGCAACTACGCCTTCACCACCAAGGCCAACTGTGAGCGCCACCTGAGGAATCGCCATGGCAAGACCAGTCGCGAGGAGGTGAAGCGTGCCATTGTCTACCACCCTGCCGAGGATGCCGGCTGCGAGGATGGCAAGTCCAGGCTGGGCGAGGATCTGGCCGATATGAGTTTCCGCTCAATAAGTCCCACGCCGCCGCCGCCACCGCCACCACCACTGCCGGCTCCAGTGGGTGAGGGCAGCAGCAGCAGCAGCTCCCAGCTGAAGCACATGCTCCTGGGCGAGCAGCAGCATCATCACCATTCCCATTCGCATCACCATCACCATCCGGTAGCCCCAGCTCAGCCGCCGTTAAAGATCCAGGTGAAGAGCCTGGACCAGCTGGTGGACAAGAAATCAGCGGCAGTTCCACAGCCGGAGAAGAGCTCCTCCTCCTCCTCCGCTTTGGACTTCAGCATGGATGTGTTGGATCTCAGCAAGAAGCCAACGGGTACAGCCGGCGCCACCACGCCCACACACACGCCCTCGCTGACGCCGGCGCCAGCCCTCGTCGGTGGTCCTGCTGCTGTGGTTCCTCCGGCTGCCGCCGATCTGGCCGCCGCTTTGGAGCAACAACAATCGCTCCTCCTGGCACAGCAGCAACTCTTTGGCGGTGCCGGTGACGCTGCCTCCCAGTACATGCAGCAGCTGTTCCGCAGCCTGGTGTTCCAGTCGCAGACGCCGGGCTTCTCCTTCTTCCCCTTCATGGCCCCACCGCCGCCGGAGGTTAGCCAGGAGAAGCCGCCAATGGTGAGTCCACCATCGCGTATGAATCCACTGCCCGTGGGCGTGGGCGTCGGAGTGGGTGTGCCCGTGCCGCCCGGCGGACCCGTCAAAATGGTCATCAAGAACGGCGTGCTGATGCCCAAGCAGAAGCAGCGGCGCTACCGCACCGAGCGTCCCTTCGCCTGCGAGCACTGCTCCGCCCGGTTCACGCTGCGCTCCAACATGGAGCGGCATGTGAAGCAGCAGCATCCGCAGTTCTATGCCCAGCGACAGCGCAGTGGTCACCATGTGATGAGGGGCAGGGGCGCATCGAATGCCGCCGCCGCTGCAGCAGCAGCAGCCGCAGCAGCAGCGGCTGCCATGGGACATGGCCATGGCCATGGGCATGGGCATGGGCATGCTCCCATCTCCGAGCAGGTGAAGTACGCCATTTTGGCGCAGCAGCTGAAGGCGCACAAGAACACCGATCTCCTGCAGCAGGCTTTGGCCCATGGCTCCAGCAGTGTGGCCGGTAATCCCCTCCTGCACTTCGGCTATCCGCTGGGCCCCGCTCCCGGGGCTCCGCATGTAAGCGGTCAGCTGGGAAACGGTCAGACGCCCATGGCCATGGACGATGATGAGCCCAAGCTGATCATCGATGAGGATGAGAATGAGCACGACCACGAAGTGGAGCCGGAGGATGTGGATGACTACGAGGATGAGGAAGATGAGGAGGAGGACGAGCCCGAGGATGAGCCGGAGGTGATTCTAGACGAATCTCCTCATCATGTTGTTGTTGTGGAAAAGGAGGAAGCACCGGAGGAGGATGAGGAGGGGGACGAGGAGGAGGAGGAGCCACCCAAGCCCCTGGAGCAGCTCGGCGCCATGTCCAAGTCCAGCCCCAGTCACAATGAGGCTGCCCAGAAGATGGCCGAGACCATCTTGGAGCAGGCCATCAAGGCAGGCATCAAGCAGCCGCCATCCTCGACTGCAACGACTCCTCCAGCAGCCTCCATCCAACAAGAGGAGAATCATCCTCCAGCAGCTGCTGCTGCTGTGACCCCACCGGCTGCCATGCAGGAGCCCAGCAGTAATCCCAGCAGCCTGAAGGCCATGATAGCCCAGGCCGAGTCTGTGGGCAAGTCGCTGAAGGAGGTGGCCAGTTCGCCGTTCAAGGACGAGTCGCAGGATTTGGTGCCGGTGGCCAAGCTGGTGGACAATGCCACCAGCCAGAACATGAGCTTCAACAGCTACTTCCGCCCCAGCGACGTGGCCAATCACATGGAGCAGAGCGACGAGGAGGGCCTGGTGGCCTCCGGCAGTGCCAGCGAGAGCAACAACAGCGGCACCGAGGACGTCACCAGCTCCAGCTCCAGCAGCGAGCCCAAGAAGAAGTCCGCCTACAGCCTGGCCCCCAACCGCGTCTCCTGCCCCTACTGCCAGCGCATGTTCCCCTGGAGCAGCTCCCTGCGCCGCCACATTCTCACCCACACCGGCCAGAAGCCCTTCAAGTGCTCCCACTGCCCGCTGCTCTTCACCACCAAGAGCAACTGCGACCGCCATCTGCTGCGCAAGCACGGCAACGTCGAGTCCGCCATGTCGGTCTATGTGCCCACCGAGGACGTCAGCGAGCCGATACCGGTGCCCAAGTCCGTGGAGGAGATCGAGCTGGAGGAGCAGCGTCGCCGCCAGGAGGCGGAGCGCGAGAGGGAGCGCGAACTGGAGCGTGAGCGGGAGTTGGAGCGCGAGCGGGAGCTGGAGCGGGAGCGTGAGCTGGAGAAGGAGAAGGAGCGGGAGCGTCAGCAGCTCATCCACAAGCTGGCCGCCCAGATGAGTGCCGCTGCGGCAGCTGCTGCAGCGGCCGCTGCTGCCTCCTGTGCCTCGCCAGGCAATGGATCCTCTGCCGGAGTTGGAGCAGGATCGGGATCGGGATCGGGAGGTGATCTCTCCGCCGGCGGTGATCTGCCCTACAAGTGCCACCTGTGCGAGGGCTCCTTTGCCGAGCGTTTGCAGTGCCTGGAGCACATCAAGCAGACGCATGCCCACGAGTTCGCCCTGCTCCTGGCCAAGGGGGCCATCGAGAATGAGTCGCTGCACGCCAACGAATCCTCATCGAATCCCCAGCAACAGCAGCTGCAGCAGCCACAACACCAGCACTCGGACGATGAGACCACCAATGGCTTGGGCCGTGGCAAATATCCGGATTATAGCAACCGCAAGGTGATCTGCGCCTTCTGTGTGCGCCGCTTCTGGTCCACCGAGGATCTGCGGCGTCACATGCGCACCCATTCCGGCGAGCGGCCCTTCCAGTGCGACATCTGCCTGCGCAAGTTCACCCTCAAGCACAGCATGCTGCGCCACATGAAGAAGCACAGTGGACGGGCCCACAATGGGGATACGCCCGGCTCCGATTGCTCCGACGATGAGCAGGCGATGGGCAGCAGTCCGCCGGGAACGCCGGCTCCCTCCCCCATGCCGCTACCCTCCAGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGCTGCACGAGCTGCTGGACAAGGCAAATGAGTGGCGAGCGAGTCGGCTGGTTGGCGAGCACAAGGAGAACCTGGGCGAGGCAACGCCCTCGGGAGCAGCGGCCGCCGGTTCGGATTTGATTGGCAACCTGCTGGGGATCAGCGATCAGGGGATACTCAACAAGCTGCTGTCCTCCGCCGATGAGGCGGCCAAGCTTCTGGGCGTGGACAACAAGTGA
Protein Sequence
MLATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVEMERKRRESTTSESSLEHLDLGRTPKKLSGSAGAAQSTSTPHEAAAATSRKRKLRQLQQQHHHHQQSRSDLLSDEDEDEEEEARPLNRHKQRRGAQGGSSSSASASIVVDYSAGDASSLRKKFRLNRSATTAASLSESGFVDASSTAHSGYLGNNSSSSASTSLAVPSTGGAAGGAAPTASASASSSSTSTSSSHSSSGGSSPQGGLCLSSGESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLKTTINNNVIENHADADEDHHHHHHLHNEEMEDADADVAMLTSTPDVATLLAGASASGAASRSPSPSPPGSPGLLLSCPACGAPDFDNLPALCAHLDARHSDIPAKCRDCEVIFASHRQLQAHCCRGASALGVVGLPPMLGASSSPLHAADEDAEDEEDRDRDREDHEDDDDEEMEQKRDDFFHKLYLKGTAGGAAGAAGNISHPPSPIKHEPADSKDLADIQSILNMTSSSCTSSFLRNFEQSVNTPSSSQYSLDGRDQEEEAQDAFTSEFRRMKLRGEFPCKLCSAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVYHPAEDAGCEDGKSRLGEDLADMSFRSISPTPPPPPPPPLPAPVGEGSSSSSSQLKHMLLGEQQHHHHSHSHHHHHPVAPAQPPLKIQVKSLDQLVDKKSAAVPQPEKSSSSSSALDFSMDVLDLSKKPTGTAGATTPTHTPSLTPAPALVGGPAAVVPPAAADLAAALEQQQSLLLAQQQLFGGAGDAASQYMQQLFRSLVFQSQTPGFSFFPFMAPPPPEVSQEKPPMVSPPSRMNPLPVGVGVGVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASNAAAAAAAAAAAAAAAMGHGHGHGHGHGHAPISEQVKYAILAQQLKAHKNTDLLQQALAHGSSSVAGNPLLHFGYPLGPAPGAPHVSGQLGNGQTPMAMDDDEPKLIIDEDENEHDHEVEPEDVDDYEDEEDEEEDEPEDEPEVILDESPHHVVVVEKEEAPEEDEEGDEEEEEPPKPLEQLGAMSKSSPSHNEAAQKMAETILEQAIKAGIKQPPSSTATTPPAASIQQEENHPPAAAAAVTPPAAMQEPSSNPSSLKAMIAQAESVGKSLKEVASSPFKDESQDLVPVAKLVDNATSQNMSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQEAERERERELERERELERERELERERELEKEKERERQQLIHKLAAQMSAAAAAAAAAAAASCASPGNGSSAGVGAGSGSGSGGDLSAGGDLPYKCHLCEGSFAERLQCLEHIKQTHAHEFALLLAKGAIENESLHANESSSNPQQQQLQQPQHQHSDDETTNGLGRGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGRAHNGDTPGSDCSDDEQAMGSSPPGTPAPSPMPLPSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLHELLDKANEWRASRLVGEHKENLGEATPSGAAAAGSDLIGNLLGISDQGILNKLLSSADEAAKLLGVDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00491706;
90% Identity
-
80% Identity
-