Dboq006187.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila bocqueti
Gene Symbol
chinmo
Assembly
GCA_018151655.1
Location
JAECXF010000002.1:16695657-16702261[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-26 1e-23 83.5 0.1 1 104 22 122 22 128 0.92

Sequence Information

Coding Sequence
ATGGATCCACAGCAGCAGTTCTGCCTCAAGTGGAACAGTTATTCGTCGAACTTGGCAATAACATTCTCCAATCTGTTCAAATCGGATCTGTTGGCCGATGTCACACTATCCTGCGATGGCGCAGTTTTCAAAGCCCACAAACTTATATTGGCGGCCTGCTCAAAGAAGTTCGCCGATCTGTTCGAGAATACGCCCACAAATGGCCAGTGTGTCATCATACTGGAGGCCACCACGCCGGATAACATGGCCGCCCTGCTCGAGTTTATGTACAAGGGTGAGGTCCATGTCTCCCAGGAGGCGCTCAACAGTTTCCTCAAGTCTGCCGAGAGTTTACAGGTCAAAGGCCTGTCCACAGAGACGGGACGCCTGGCGGCCCAGCAGGCGCAACAGCAACAGCACATGGGCGACAGCTCGCCGCTGGACTCGCCCACGGGTAGAAGGAGCATGCGAAACAGCCTGAGCGGAGGCAATGGCGGCAGCAGCATTCTCCCTGGTGGAGCAGCCGGCGTGGGCATTGGCTTAGGCGGTGTGACGGGAGCCAACTCCATACCCGGTGGTCTGGGCAACGGCAATGGCCTGAGCTTGGCTGGCGCACTCAGCGGCATGGCTGCGGCCGGAGGCATGGCAGCGGCTGCCAGTGTGGCGGCCAGCGGCCTGAGTGCCCTGGCGGCCAGTGCGAATGCTTTGGACAGATGCGGCAGTGCTGGTGGCGGCAACATAATTGGTGGCACAGCGGCGGGTATTGGTCCATTGAGTGGTGGCACAGGAACTGGCGGTGGTAATGGTGGCATGGGTGTCGGCGGCGGCGGCAATGGTGTTGGCGGCGGCGGCAACAATGGACCCATCAGCCTGGGCAGCGGTGCTGGCGCCGCTCATCATCTGGGCGGTTCGACAGGCAGCCTGAAGCAGGAATGCGATTCGTTAATGCATCCGGGTGGCAGTAGCTCGTCCTCGGGTGGAGGCATGGGCTACACCCATGTGCCGCCCATCTACCGACCCATCTCCTACGAGCCACTGCGAAAGCGTGCCCTGCGCAGTCCCTATGCCGAGCAGGAGCAGCGCGGCTCAGTGCTGCGCGATGGCTCCAAGAACTCGTCCTCCGAGTGTCCCAGCCCCATAAATAAGCCACCGTACCATCGTCCCTCGTCCAGTGCATCCTCAACGGCGCCCACCGAGGCGGACACTATGCACTCGGAACGCGCTTCGCCACAGTCCAGTCGCTATGAAAACCACAGTCCCAGCACCACAGCGGGCAATGGCAATGTCACCAGTGGCCTGGATCGCATTGTTAAATCTGAGCGCAACAATGGCAGTGCCAACGAGGCTAACGATGATGACCGCGAGCTGATGGACGAGTCAACAGATAACGGAGCCGAGGATCTGCGCGTGAAGCTGGAGAACTCAAACTATTCACCGCCGCCACCGCCAAACTCGAACACCTCATCGACCACCACACCGAATGCCCTGCTGGAGAACCTCAAGAATGCCGATGGATCGCTTTCGGGCAACCTGGCTGCCTCCATAGCGCCGGCGGACATGCTGAACGTTTGGAATGCCACCAAGATGAACAACAAGAACAGCGTCAACACGGCCGATGGCAAGAAACTAAAGTGTTTGTATTGCGATCGCTTGTACGGCTACGAGACGAATCTGCGAGCGCACATAAGGCAGCGGCATCAGGGCATTCGAGTGCCCTGTCCCTTCTGCGAGAGAACCTTTACGCGTAACAACACCGTGCGTCGGCATATCGCACGGGAGCATAAGCAGGAAATTGGCCTGGCGGCGGGTGCCACAATTGCGCCCGCCCATGTGGCAGCAGCGGCAGCGGCGGCGGCGGCCGCCAATCATTCACCATAG
Protein Sequence
MDPQQQFCLKWNSYSSNLAITFSNLFKSDLLADVTLSCDGAVFKAHKLILAACSKKFADLFENTPTNGQCVIILEATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGLSTETGRLAAQQAQQQQHMGDSSPLDSPTGRRSMRNSLSGGNGGSSILPGGAAGVGIGLGGVTGANSIPGGLGNGNGLSLAGALSGMAAAGGMAAAASVAASGLSALAASANALDRCGSAGGGNIIGGTAAGIGPLSGGTGTGGGNGGMGVGGGGNGVGGGGNNGPISLGSGAGAAHHLGGSTGSLKQECDSLMHPGGSSSSSGGGMGYTHVPPIYRPISYEPLRKRALRSPYAEQEQRGSVLRDGSKNSSSECPSPINKPPYHRPSSSASSTAPTEADTMHSERASPQSSRYENHSPSTTAGNGNVTSGLDRIVKSERNNGSANEANDDDRELMDESTDNGAEDLRVKLENSNYSPPPPPNSNTSSTTTPNALLENLKNADGSLSGNLAASIAPADMLNVWNATKMNNKNSVNTADGKKLKCLYCDRLYGYETNLRAHIRQRHQGIRVPCPFCERTFTRNNTVRRHIAREHKQEIGLAAGATIAPAHVAAAAAAAAAANHSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00593956;
90% Identity
iTF_00490419; iTF_00490199; iTF_00536194; iTF_00536404; iTF_00536117; iTF_00517862; iTF_00518086; iTF_00517791; iTF_00580898; iTF_00580818; iTF_00581151; iTF_00477411; iTF_00477668; iTF_00476008; iTF_00476266; iTF_00477457; iTF_00476052; iTF_00580097; iTF_00488099; iTF_00539043; iTF_00566216; iTF_00488142; iTF_00539086; iTF_00580307; iTF_00566425; iTF_00580057; iTF_00566171; iTF_00488349; iTF_00539295; iTF_00550370; iTF_00481867; iTF_00481619; iTF_00550583; iTF_00550329; iTF_00481661; iTF_00504069; iTF_00615686; iTF_00504327; iTF_00614983; iTF_00504110; iTF_00615024; iTF_00615643; iTF_00615835; iTF_00615230; iTF_00546086; iTF_00546291; iTF_00546044; iTF_00603491; iTF_00603431; iTF_00603711; iTF_00484516; iTF_00484560; iTF_00484756; iTF_00593956; iTF_00593915; iTF_00594176; iTF_00541153; iTF_00541414; iTF_00541193; iTF_00606401; iTF_00480514; iTF_00531781; iTF_00480294; iTF_00590316; iTF_00606700; iTF_00480247; iTF_00590359; iTF_00531737; iTF_00606458; iTF_00590588; iTF_00531997; iTF_00594626; iTF_00594884; iTF_00594667; iTF_00613573; iTF_00613830; iTF_00613612; iTF_00488742; iTF_00488784; iTF_00489012; iTF_00491590; iTF_00491631; iTF_00491856; iTF_00571977; iTF_00572236; iTF_00572019; iTF_00489451; iTF_00489711; iTF_00527439; iTF_00527383; iTF_00489496; iTF_00527678; iTF_00478095; iTF_00478352; iTF_00478135; iTF_00474855; iTF_00474638; iTF_00474581; iTF_00564057; iTF_00563999; iTF_00564287; iTF_00515019; iTF_00601135; iTF_00601395; iTF_00514970; iTF_00515230; iTF_00601184; iTF_00487431; iTF_00487379; iTF_00487644; iTF_00507688; iTF_00507958; iTF_00507737; iTF_00611432; iTF_00611697; iTF_00611478; iTF_00565458; iTF_00565502; iTF_00565726; iTF_00472009; iTF_00471699; iTF_00471773; iTF_00473860; iTF_00474152; iTF_00473934; iTF_00480938; iTF_00481195; iTF_00480983; iTF_00562095; iTF_00561840; iTF_00561886; iTF_00515669; iTF_00515717;
80% Identity
iTF_00490419; iTF_00490199;