Basic Information

Insect: Drosophila bocki
Gene Symbol: RREB1
Assembly: GCA_008042715.1
Location: VNJY01006900.1:53719-60954[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.031 2.2 8.8 0.8 1 21 250 270 250 272 0.93

2 12 0.00029 0.021 15.2 0.2 1 23 282 304 282 304 0.98

3 12 7e-05 0.005 17.1 7.3 1 23 310 332 310 332 0.98

4 12 1.8 1.3e+02 3.2 3.7 2 19 548 565 548 567 0.97

5 12 0.0072 0.52 10.8 0.1 1 23 714 736 714 736 0.97

6 12 1.1e-05 0.00076 19.7 0.7 1 23 746 768 746 768 0.99

7 12 0.00071 0.051 13.9 2.0 1 23 774 797 774 797 0.97

8 12 0.0026 0.18 12.2 2.0 1 23 1076 1099 1076 1099 0.95

9 12 7.4e-05 0.0054 17.0 0.3 2 23 1482 1503 1481 1503 0.97

10 12 0.12 9 6.9 6.3 1 23 1509 1532 1509 1532 0.97

11 12 0.0073 0.52 10.7 0.5 3 23 1733 1753 1731 1753 0.96

12 12 0.0012 0.087 13.2 4.8 1 23 1759 1781 1759 1781 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.031	2.2	8.8	0.8	1	21	250	270	250	272	0.93
2	12	0.00029	0.021	15.2	0.2	1	23	282	304	282	304	0.98
3	12	7e-05	0.005	17.1	7.3	1	23	310	332	310	332	0.98
4	12	1.8	1.3e+02	3.2	3.7	2	19	548	565	548	567	0.97
5	12	0.0072	0.52	10.8	0.1	1	23	714	736	714	736	0.97
6	12	1.1e-05	0.00076	19.7	0.7	1	23	746	768	746	768	0.99
7	12	0.00071	0.051	13.9	2.0	1	23	774	797	774	797	0.97
8	12	0.0026	0.18	12.2	2.0	1	23	1076	1099	1076	1099	0.95
9	12	7.4e-05	0.0054	17.0	0.3	2	23	1482	1503	1481	1503	0.97
10	12	0.12	9	6.9	6.3	1	23	1509	1532	1509	1532	0.97
11	12	0.0073	0.52	10.7	0.5	3	23	1733	1753	1731	1753	0.96
12	12	0.0012	0.087	13.2	4.8	1	23	1759	1781	1759	1781	0.99

Sequence Information

Coding Sequence: ATGCTCGCgacacagcaacaacaacaaccgcagcccggcagtggcagcagcaccagcaataATAACGTAGCCGCCGCCACCCACACCAACACAGACGTAGTAGAGATGGAGCGGAAGCGGAGAGAATCTACAACGTCAGAATCTTCTCTCGAGCATCTCGACCTCGGGCGAACGCCAAAGAAGCTCAGCGGCAGCGCCGGTGCCGTGCAGTCGACATCGACGCCGCACGAGGTGGCTGCAACGTCGCGCAAGCGCAAGTTGcgccagctccagcagcagcaccatcaccaGCAAAGTCGGGATCTCCTCAGcgatgaggacgaggacgaggaggaagCACGTCCCCTCAATCGGCACAAACAGCGACGCGGCGCCACCACCGCCCAGGgatcctcctccgcctccattGTGGTGGACTACTCCGCCGGCGATGCCAGTTCGCTGCGCAAGAAGTTCCGTCTCAATCGTTCGGCGGCCAGTCTCTCGGAGTCGGGATTCGTGGATGCCAGCAGCACGGCCCACAGCGGCTTTCTGgtcaacaacagcagcagcgccagcacaAGCCTGGCAGTGCCTTCTGCCCCCACATCCGCCGCTAGTGGAGCAGCTGCCTCCGCCTCGAGTAGCAGCACCAGCactagcagcaacagcagcagcatcggcgGCGGTTCCGGCGGCTCCTCGCCACAGGGCCTGTGCCTCTCTAGCGGTGAATCTGGCATCGGTGCAGGCGACGAGCACATGAAATACCTGTGCCCCATCTGCGAGGTGGTCTCCGCCACGCCGCACGAGTTCACCAATCACATCCGATGTCACAACTATGCCAACGGGGACACGGAGAACTTCACCTGCCGCATCTGCTCCAAGGTGTTATCTTCGGCCTCATCCCTGGACAGGCACGTGCTGGTGCATACGGGCGAGCGGCCGTTCAACTGTCGGTACTGCCACCTGACCTTCACCACCAACGGCAATATGCACCGCCACATGCGCACTCATAAGCAGCACCAGACGGcgcagtcccagtcccagtcccagtcccataCGCAAGCCCaatcccagcagcagcgccgtcaacagcagcagcagcaaactcatcccgcccagcagcagcagcaacagcagacgcTGGTCAGCTCCATGCCAGTGCGGGCGGAGAGCTATGAAAGCGACGCTAGCGGTTCCACTGATGTGTCCAGCGGTAAtagtcgcagtcgcagcagtAGCTCCctccacaacaacaacaactcccACAAGGCTcataacaacaacaggaacAGCAAGCTtgagctggaggagatgcaggagcaggagctggaggaggacaagcagcagctgcagcgtcGTTTGAAGACTACCATCAATAACAATGTCATCGGTGAAGAGAACCATGCGGAGGAGGATATGCATGGCGAGGAGGACGCCGACGATGCCGACGATGTGGCCATGCTCACAAGCACACCCGATGTCGCCACCCTGCTGGCAGGAGCCAGTGCCTCCGGTGCTGCATCCCGTTCGCCCTCGCCCTCGCCACCCGGCTCGCCCGGTCTGCTCCTGAGTTGCCCCGCCTGCGGAGCCTCCGATTTCGAGACGCTGCCTGCCCTGTGCGCCCATTTGGATGCTCGGCATTCGGATATACCGGCCAAGTGCCGGGACTGTGAGGTGATATTTGCCAGCCACCGCCAGCTGCAGGCGCACTGCTGCAGGGGACCTTCCTTGGGAGCGGGACTGCCGCCTATGCTTGGCGCCAGCAGTTCGCCTCTGCACGCCGACGAGGATGCCGaagacgaggaggaggcggatcACGAAGACGACGAGGAAATGGAGCACAAGCGTGACGACTTCTTCCACAAGCTATACCTCAAGGGAACATCAGCAGCGGGAGGAAACGGTGGCAGCGGCATCATCTCCCACCCACCGTCACCAATTAAGCACGAGCCGGCGGACAGCAAGGATCTGGCCGATATACAGAGCATCCTGAATATGACCAGTTCCAGCTGCACCAGCAGCTTCCTGCGCAACTTCGAGCAGTCTGTCAACACGCCCAGCTCCAGCCAATACAGCTTAGATGGGCGCgatcaggaggaggaggcccagGATGCCTTCACCTCAGAGTTCCGCCGGATGAAGCTGCGCGGTGAGTTCCCCTGCAAGCTCTGCACCGCCGTTTTCCCGAATCTGCGCGCTCTCAAGGGCCACAACCGCGTCCACCTCGGAGCGGTTGGACCCGCGGGACCCTTCCGCTGCAACATGTGTCCCTACGCCGTCTGCGACAAGGCGGCGTTAGTACGGCACATGCGCACCCACAACGGCGACCGTCCGTACGAGTGCGCCGTCTGCAACTACGCCTTCACCACCAAGGCCAACTGCGAGCGCCACCTGAGGAATCGGCACGGCAAGACCAGTCGCGAGGAGGTAAAGCGCGCCATTGTCTACCATCCCGCGGAGGATGCCGGCTGCGAGGATAGCAAGTCGCGGCTGGGTGAGGATCTGGCCGACATGAGTTTCCGCTCAATAAGTccgacgccgccgccaccgccgccgccagttgGTGAGAACAGCAGCTCCCAGCTAAAGCACATGCTCATGggcgagcagcagcatcactcccagacccagacccatccccatcataatcatcatcatccggtGGCGCCAGCTCAGCCGCCGCTAAAGATTCAGGTGAAGAGCCTGGACCAGCTGGTGGACAAGAAACCAGCGACAGTCCAACAGCCGGAGAAGAGCTCCGCCTTGGACTTTAGCATGGATGTGTTGGATCTCAGTAAGAAGCCAACGGGTGCAGCGACGACCCCCACGCCCACACCCACGCCCTCGCTAACGCCGGCGCCCCTTGGTGCGGCTGCAGTGGCTGCTCCGGCTGCCGATCTGGCCGCCGCTTTGGAGCAACAGCAGTTGCTTctggcacagcagcagctcttcGGCGGTGCCAGCGACGCTGCCTCCCAGTACATGCAGCAGCTGTTCCGCAGCCTGGTGTTCCAGTCACAGACGCCGGGCTTCTCCTTCTTCCCGTTCATggcgccaccgccgccggagGTGAGCCAGGAGAAGGTGCCTCTGGTTAGTCCGCCATCGCGGATGAACCCACTGcccgtgggcgtgggcgttgGTGTGCCAGTGCCGCCCGGCGGACCGGTCAAAATGGTTATCAAAAACGGCGTCCTGATGccgaagcagaagcagcgtCGCTACCGCACCGAACGTCCCTTCGCCTGCGAGCACTGCTCCGCCCGGTTCACGCTGCGCTCCAACATGGAGCGACACGTGAAGCAACAGCATCCGCAGTTCTATGCCCAGCGACAGCGCAGCGGTCACCATGTGATGAGGGGCAGGGGCGCCTCgaatgccgctgctgctgctgctgccgctgccgctgcagcggcTGCCATTGGTCCGGCGGGGGGATCGTCCCATCATCATGCCCACGCCCACAGCCACGGCCACAACCATGGCCATGGACATGGGCATGCTCCGATATCGGAGCAGGTGAAGTACGCCATTTTGGCGCAGCAGCTGAAGGCGCACAAGAACACCGATCTGCTGCAGCAGGCCTTGGCCCACGGCTCCAGCAGTGTGGCAGGGAATCCCCTTCTCCACTTCGGCTACCCACTCGGTCCCGCGCCCGGTGCTCCGCATGTGAGCGGTCAGGGAAACGGCCAGACGCCCATGGCCATGGACGACGATGAGCCCAAGCTGATCATCGATGAGGATGAGAACGAGCACGACCACGAAGTGGAGCCGGAAGATGTGGATGACTACGAGGACGAGgaagatgaggaggaggacgagccCGAGGATGAGCCGGAGGTGATTCTGGACGAGCCCTATGTCGCCGCGGGCGtcgagaaggaggaggcgccggaggaggagcagctacCCAAGCCCCTGGAGCAGCAAAGCTCAATGTCAAAGTCCAGCCCCAGTCAGAACGAGGCTGCCCAAAAGATGGCGGAGACCATCTTGGAGCAGGCCATCAAGGCTGGCAAGCAGCCATCTGCAACGACTCCGCCGTCCGTCGCGGCATCCTCTGTCCAGGAAGAGAATCCCCCAACTGCCGTAACACCTCCGGCTGCCATGCAGGAGCCCAGCAGTAATCCCAGCAGCCTGAAGACCATGATAGCCCAGGCCGAGTCCGTCGGCAAGTCGCTGAAGGAGGTGGCTAGTTCGCCGTTCAAGGACGAATCCCAGGACCTGGTGCCGGTGGCCAAGCTGGTGGACAACGCCACCAGCCAAAACATGAGCTTCAACAGCTACTTCCGACCCAGCGATGTGGCCAATCACATGGAGCAAAGCGACGAGGAGGGCCTGGTGGCCTCCGGCAGTGCCAGCGagagcaacaacagcggcacGGAGGACGtcaccagctccagctcgaGCAGCGAGCCGAAGAAGAAGTCCGCCTACAGCCTGGCCCCGAATCGCGTCTCCTGCCCATACTGCCAGCGCATGTTCCCGTGGAGCAGCTCCCTGCGCCGCCACATTCTCACGCACACCGGTCAGAAGCCCTTCAAGTGCTCCCACTGCCCACTGCTCTTCACCACCAAGAGCAACTGCGACCGCCATCTGCTGCGCAAGCATGGCAACGTCGAGTCCGCCATGTCGGTCTATGTGCCCACCGAGGATGTGAGCGAGCCCATTCCGGTGCCCAAGTCCGTGGAGGAGatcgagctggaggagcagcgtCGCCGCCAGGAGGCGGAGCGGGAAAGGGAGCGCGAACTAGAGCGCGAGCGGGAGCTTGAGCGCGAGCGTGAGCTGGAGCGGGAGCGCGAACtggagaaggaaaaggagcaCGAACGTCAGCAGCTCATTCATAAGCTGGCCGCCCAgatggctgccgctgccgctgctgctgctgtctcgTGTGCCTCGCCGGGCAATGGGTCATCTGCCGGAGCCGGAGGCGATCTTTCGGCCGGCGGTGATCTGCCCTACAAGTGCCACCTGTGTGAGGGCTCCTTTGCCGAGCGCCTGCAATGCCTGGAGCACATCAAGCAGACGCATGCCCACGAGTTCGCCCTACTCCTCGCCAAGGGGGCGATCGAGAATGAGTCATTGCACTCCGCCGACTCATCGAATCCCCAGCAGCAGtcacaacaacatcagcactCGGACGACGAGGCCACCAATGGCCTGGGACGTGGCAAGTATCCGGATTATAGCAACCGAAAGGTGATCTGCGCCTTTTGTGTGCGCCGCTTCTGGTCCACCGAGGATCTTCGGCGCCACATGCGCACCCATTCCGGCGAACGCCCCTTCCAGTGCGACATCTGCCTGCGCAAGTTCACCCTCAAGCACAGCATGCTGCGCCACATGAAGAAGCACAGTGGACGGGCCCACAATGGGGATACGCCCGGCTCCGATTGCTCCGACGATGAGCAGGCGATGAGCAGTCCGCCCGGGACACCAGCCCCCTCTCCCATGCCCCTCCCCTccagcaccaacaacaacaacagctgccagaataataataacaacaacaacaacaacaataataataatagcaataataataacaataacaacaacaagctgGGCCTGAAGCTGCCCAAGCTGCACGAGCTGCTGGACAAGGCGAACGAGTGGCGAGCGAGCCGGCTGGGCGAGCACAAGGAGAACCTGGGCGAGGCAACGCCCTCGGGAGCGGCGGCAGCTGGTTCGGATCTGATTGGGAACCTTCTGGGGATCAGCGATCAGGGCATACTCAACAAGTTGCTGTCCTCCGCCGATGAGGCGGCCAAGCTCCTGGGCGTGGAAAACAAGTGA
Protein Sequence: MLATQQQQQPQPGSGSSTSNNNVAAATHTNTDVVEMERKRRESTTSESSLEHLDLGRTPKKLSGSAGAVQSTSTPHEVAATSRKRKLRQLQQQHHHQQSRDLLSDEDEDEEEARPLNRHKQRRGATTAQGSSSASIVVDYSAGDASSLRKKFRLNRSAASLSESGFVDASSTAHSGFLVNNSSSASTSLAVPSAPTSAASGAAASASSSSTSTSSNSSSIGGGSGGSSPQGLCLSSGESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQTAQSQSQSQSHTQAQSQQQRRQQQQQQTHPAQQQQQQQTLVSSMPVRAESYESDASGSTDVSSGNSRSRSSSSLHNNNNSHKAHNNNRNSKLELEEMQEQELEEDKQQLQRRLKTTINNNVIGEENHAEEDMHGEEDADDADDVAMLTSTPDVATLLAGASASGAASRSPSPSPPGSPGLLLSCPACGASDFETLPALCAHLDARHSDIPAKCRDCEVIFASHRQLQAHCCRGPSLGAGLPPMLGASSSPLHADEDAEDEEEADHEDDEEMEHKRDDFFHKLYLKGTSAAGGNGGSGIISHPPSPIKHEPADSKDLADIQSILNMTSSSCTSSFLRNFEQSVNTPSSSQYSLDGRDQEEEAQDAFTSEFRRMKLRGEFPCKLCTAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVYHPAEDAGCEDSKSRLGEDLADMSFRSISPTPPPPPPPVGENSSSQLKHMLMGEQQHHSQTQTHPHHNHHHPVAPAQPPLKIQVKSLDQLVDKKPATVQQPEKSSALDFSMDVLDLSKKPTGAATTPTPTPTPSLTPAPLGAAAVAAPAADLAAALEQQQLLLAQQQLFGGASDAASQYMQQLFRSLVFQSQTPGFSFFPFMAPPPPEVSQEKVPLVSPPSRMNPLPVGVGVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASNAAAAAAAAAAAAAAIGPAGGSSHHHAHAHSHGHNHGHGHGHAPISEQVKYAILAQQLKAHKNTDLLQQALAHGSSSVAGNPLLHFGYPLGPAPGAPHVSGQGNGQTPMAMDDDEPKLIIDEDENEHDHEVEPEDVDDYEDEEDEEEDEPEDEPEVILDEPYVAAGVEKEEAPEEEQLPKPLEQQSSMSKSSPSQNEAAQKMAETILEQAIKAGKQPSATTPPSVAASSVQEENPPTAVTPPAAMQEPSSNPSSLKTMIAQAESVGKSLKEVASSPFKDESQDLVPVAKLVDNATSQNMSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQEAERERERELERERELERERELERERELEKEKEHERQQLIHKLAAQMAAAAAAAAVSCASPGNGSSAGAGGDLSAGGDLPYKCHLCEGSFAERLQCLEHIKQTHAHEFALLLAKGAIENESLHSADSSNPQQQSQQHQHSDDEATNGLGRGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGRAHNGDTPGSDCSDDEQAMSSPPGTPAPSPMPLPSSTNNNNSCQNNNNNNNNNNNNNSNNNNNNNNKLGLKLPKLHELLDKANEWRASRLGEHKENLGEATPSGAAAAGSDLIGNLLGISDQGILNKLLSSADEAAKLLGVENK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00491706;
90% Identity: iTF_00491706;
80% Identity: -