Basic Information

Insect: Drosophila bocki
Gene Symbol: -
Assembly: GCA_008042715.1
Location: VNJY01003477.1:2720-9252[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0039 0.28 11.6 0.8 1 23 1317 1340 1317 1340 0.97

2 13 6.8 4.9e+02 1.4 0.2 1 23 1498 1520 1498 1520 0.91

3 13 0.00015 0.011 16.0 2.7 2 23 1523 1544 1523 1544 0.97

4 13 5.8e-05 0.0042 17.3 0.2 3 23 1552 1572 1550 1572 0.98

5 13 4.8e-07 3.5e-05 23.9 4.1 2 23 1579 1600 1578 1600 0.97

6 13 4.6 3.3e+02 1.9 0.4 5 23 1613 1631 1611 1631 0.96

7 13 1.1 82 3.8 5.4 3 23 1638 1659 1636 1659 0.93

8 13 0.12 8.7 6.9 0.2 2 23 1670 1690 1669 1690 0.96

9 13 4.6e-05 0.0033 17.6 0.4 1 19 1696 1714 1696 1718 0.95

10 13 2.9e-05 0.0021 18.3 0.4 1 23 1726 1748 1726 1748 0.98

11 13 8.7e-05 0.0063 16.8 7.6 1 23 1754 1776 1754 1777 0.96

12 13 0.00018 0.013 15.8 6.5 1 23 1782 1804 1782 1804 0.98

13 13 0.0022 0.16 12.3 6.1 1 23 1810 1832 1810 1833 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0039	0.28	11.6	0.8	1	23	1317	1340	1317	1340	0.97
2	13	6.8	4.9e+02	1.4	0.2	1	23	1498	1520	1498	1520	0.91
3	13	0.00015	0.011	16.0	2.7	2	23	1523	1544	1523	1544	0.97
4	13	5.8e-05	0.0042	17.3	0.2	3	23	1552	1572	1550	1572	0.98
5	13	4.8e-07	3.5e-05	23.9	4.1	2	23	1579	1600	1578	1600	0.97
6	13	4.6	3.3e+02	1.9	0.4	5	23	1613	1631	1611	1631	0.96
7	13	1.1	82	3.8	5.4	3	23	1638	1659	1636	1659	0.93
8	13	0.12	8.7	6.9	0.2	2	23	1670	1690	1669	1690	0.96
9	13	4.6e-05	0.0033	17.6	0.4	1	19	1696	1714	1696	1718	0.95
10	13	2.9e-05	0.0021	18.3	0.4	1	23	1726	1748	1726	1748	0.98
11	13	8.7e-05	0.0063	16.8	7.6	1	23	1754	1776	1754	1777	0.96
12	13	0.00018	0.013	15.8	6.5	1	23	1782	1804	1782	1804	0.98
13	13	0.0022	0.16	12.3	6.1	1	23	1810	1832	1810	1833	0.96

Sequence Information

Coding Sequence: ATGGTGGACAACAGCGTTCAGTGCCCCGTGTGCACCCTGTACCTGCATGCGGGTATGAATCTCTCCGATCACTTGGAGACTCATCCCAAGGAGCAGGTGATCAAGGCGCTGGTCCAGATGACGATTgtcggtggcggtggcaacaACAGCATGGGCAGCGCCCTGGCGGCCGCTATGATGtcaggaggaggcggaggaggcggtgggTCTGATGGCGGAGAAGCCAGCCTGGCAGATGATAAGTCTGCCTTCACATTGTCACCACAACAATGTGGCGATGTGAAACCAGTTGTGGCCACCAGCCCGCCAGCGATGTCCAAAACCATATCAGCTGCAATGCCCGTAGTGccgccagcaccaccaccgtTGCCGCCGCTCTCCTCCGCCAATGCTGCACCCTCCTGCACATCCCCTTCTGCAAGTAGCAgcactagcagcagcagcagcagcaatctgAGCAATCCACCGATGAAAGCACTGAAATGCGCACCGCCCACGACTGAGGCGCGAGCCAACACATCCGCACATCCCACCATAAGCAGCGTATCCACACAGTATCAGCCGTCGCTGGTTGCTCCGGATTATCGCTTtaatcaccagcagcagcagcagcagcagcagtcgggCTTTGGGCGTGGTGTTGCTGGCACCAACGCAGCCACGCTGGTAATACCGCAGGTTGCGCAGCAGCACTTCCTTGCCAGccatcagcagcaggcccACTTTacgcatcagcagcagcagcagcaacaacagcagcagcagcagtcgcccCTAAAGTTTACCTATGCCACCGctttgccgccgccaccgccgttGCAGCTGTTtacgcaacagcagcagccgacgGCAGCTTCAACGCAGCCTCACCAGAAACCACCTCCCGCCTATGGAGCCGCCATCAGTCAAATACGATCTCAGCACAACCAaatcaagcagcagcagcagccacatcaacagcagctgcagcagcagcagtcacaGCCACCCCACATGGCCGGGCAGCATAACCTAACCCTGGCACCACCGACACCAACAGCAGAAGTAGCTGGAAAGCAGCCCAGCAAGGCGCATGCGGAAGTATTTCTGAAtcccccaccaccaccaccgccgccgtcaCAGGCACAGGCCACTATATCGATCCACAGCATGGGACAGAATCATCATCAGAGTCATCCTCATATGCAACATCAAattcaccagcagcagcagttggcaACATCACCATCCTCAAGattacagcagcagcagcagcagcagtcactTAGCTTGCAGACCTACGGTCCAGTCTCAGTGAGCAGCAGCTGTAGCTCCAGCTCTGCTTCCAACTCtggatctgctgctgctgcgtctggTAGTAGGAGCAGTCGGCAAACCAATTCACCATTTGGGGCTCTGCTCAATGCAGCGGCGGCTGTGGCCTGCGCCTCGCCAGCCACGACCAATGCCTGCTCGTCGGTTCTGCGCTTTGCGGAATCACCGGTGGCCCACTATCTTGAGCGGGACAATGGTGACTTTATTGTCCAGGAAACGCCCAAGCATATTGTGGAGTGTGTGGAGAAGGAGGACGGTGAGTTCTCTGTGATCGAACGCATTTACCAATCCCCGCCGAGTGTCCTGCACATACACGATGACGATGAAGACgaagaggatgaggaggaggaggaggaggaggtggacgATGACAACGATCGCGAGGCTCAGCCAGAGGAGGAGGTAGACGGGGACGATGAGCGGGATGAGAATAGCCGCAGTCGCAGCCGAAATAAGACAACGAAAAAATCGCGAAAGGCCAAGCCCAAGCGAAGTTCCAAGCGCGTCtcggatgaggaggaggagtttaTGAGCATTAGCAGCGGCTGCGAGAGTGACCCGGAAACGGAGCGCAAACCCGAGTCAATGTCCACGACGTCCACAGCTCCACCTCCGCTTTGCTCAGGTCCCTCGACCAGCTCTGCTGCAGCCGTCGCCTCCACGTCCAGCAATCTGGTGGATATCCATTCCAATTCGGCCTCCAATTCAGCCTCAAACTCCACCTCCACCACGACCAAGTCCAAAAAGAACCGGATCACAGTGCTTAGCGATGTGCCGCTCAATATGAATGAGTATCTCGATTTGATGGGTAACATAGTGGCCTCCAGTCGCATCGGGGCAGGGCGTCCCTTTGCCGCTGTGGTCCCCATTCCCCTCGTTAaggtggagaaggaggagcccCTCGACGAGTACGACGATCCCGAGGCAgcgcagcagctggagcagaagCCAAGCTTGGAGCACGGCACCACCAGTGTCATTCGCATGGCCAGCACAGTAACAGCGACGGCAACGTCGACACCGGTGACTGAAGAAGCCTCCTCCGCCGAGGACCCCAACGAGCCGCCACTCATGAAGGTCGAGGTGGAGCCCAATACGATGCTGCTACCGCAGCGCTTCTCCACTCCTGCCCAGAGTCGCGGGCCCAAGAAATTAGTCATCAAACCAAAGGCAacggcatcagcagcaacgATGGAGACGGAAACAAAAAAGACTGACACCACACcatcttcctcctcctcctcctcctccagcagcagcaacccatCCATATCAAGAGATCTGGGCCAGGTGCAGGTTAAAAGTGAGACTCTAGAGGCTCCGGCGGCAAGCATTCTGGAGAAGCATCTAACCACCAGTCGCAGCCAGAGCCAGCACCACCATTCGGCGGTCAACGATGACGATGCCCGAGTGCTGCTGGAGTTTGCCAACTCCAAGCAGCCGCCTCCGCTGGCAGCGTCCAGTACCACGTTCGTGGTGAATGCCAGCACGGGATTCCCATCGGCAGGGTCTGTTTTTGCCAGCAGTAGCAGCTCCAAGACCCCATCAAAGCCTGGCGAGGAATACATTCTGCCGGACAACACCAATCTGGATGTGGATGAGATTGTGATATCCTCGTCGTCTTCCTACGCCTCCTCAGCGGCGGCCCAGGTGCAAGCAGCGCTGCAGCCTCCGGACTTTAACTTCCTTTACCACCAGACCACAAGCacgactgcgactgcggctACCTATCCTTTTAATGCCTTCGCAcggcaacaccagcagcagccgccacacGGTGTGAGCGATGCCACCAATGCGGCCACATTGGCCTCCTCTTCCAGCAATTCCATGGACCATGACTCTATGAATGCCTCCTTCCGGGTGGCCAAGACACAGTCGCTGCAGTGGTaccagcaggaacaggagaaTGATCCACAGATTCAGGCAGAAGGAGCCGGAGTGTCGGGTGTGTCCTCCAACCATAGCCACACCGATGTGGTGGTCAGCCACCAGCCCACCAACTTCAATGCCGCCCTGGCGGCCGTCGATTGCAGCAGCGTTGCAGCAACGCTGGACGAGGAAGCCAAGTATCTGGATTTGGACACCTGCAAGCGGGAGCAgctaagcagcagcagcaacctgcCCTCGGTCTCCGCCTCGACATCCACCACCTCGTCCTCGTTCGCCGGTGCTGCCACGGAGAGCAGTTTGGTGGGTGGACTCAACATTCGCACCGATGAAAAGATGCCCGCCAAGGGTGAGATCTCCGAGCAGGAGAGCAACTGTGACATTGAAAACTCGTGGAGTGAATCGGTTTATGGGGACATTTCGCAGAGGTTTTTCAGAAACCAGTTCTCTGGAGGCTACAACCCCGATTGGCGACAGGACTACTACCCGGCTCAGGATCTCAGCAGCGCTCAGCAGAGGGAGCATAAGCGCTTCGACTTCAATGCGATTGATGATGAGGCCTCATCCAGCTCTAGGAAGAGCCAGCTGACGGATATCGTCCCCAATGTGGCCACCTCCTCCACTTCCACGTCATCGGCTTTGCTGGCGGGTCCACCAATAGCTTCGACATCTAGGGCTGCCGCTGAGGCGGCAgcggaggcggcggctgctCTTGCCCAGCGAAGGCCACATCGCCGCAAGCTTTACAAGTGCCCCCATTGCGATTCCATCTTCGAGAAGCTCAAGGAGCGGAATGCCCACATGATAAGCGACCATAACTATGTGCGTCAGAATCGAAGGCTCATCTGTACCCAGCCGCCGGTCAGTGAACCGATGCtaccgccgcagcagcagcagcagcatgcccagttgctgctgcaaacCGACGACGCTGTGCAGGAGGACTCAAAAGATGGCATTGTGAAGATCAAGCAGGAGCAGTGTTTGGAGAAACCGGAAGTCGAACAAATGCATCACGCTAATTCGGCTGAGCTGCTGTCGGATGTCAAGGACTCGGAGCTTCTGGGTATCGGCGGCGAGGGCGATGCGGATTTAGATGGCGATATTAAGCCACCTAGTCAGCTATTTGAGAAGTCATCGTCCACACTGCCGCCGCTGGCCATGACCACGCCGGCAGCAAAGCTGGCGGCACTCTATCGCATGCTTATCGCCTACAATGAATCGAAGCTGGGCCAGGAGCGCAACAACCTTAGCGAACTGGAGCAGAAGGCAATGGAGAAGTCCATCTTTCTGTGCTACGTCTGCCGCACCGACTTTCCCTCCGTGAAGCTTTACGATGCCCATCTAACCGAGCACCCGGCCGAGTGTTTCACCTGTGGCAAGAAGTTCTACCGCTGGAAGAACTTCTCTCTGCATTTGAAGCGGCATCTGGGCTGGAAGGAGTTCGGCTGTTATGTGTGCGACAAGAAGTTTGTGGTACGGAGCGCCCTAGTTGAGCACATGCGGATGCACACGGGTCAGACGCCGCTCAAGTGCAAGATATGCGGGAAAAAGTTCAAGCGCTACTCGAATCTGACGCAACACCGCAAGCGACACACCAAGGTGATGGTGCGTAAGAAGGAGTACGTGTGCCACTGTGGCGAGGTTCTGCCCTCAAAGGCGCGCTTCCTCTGGCACAAGGAGACCCACGACCTGAAGCCGAAATGCTGCCCGTATTGCTGTGACCGATTTGTGCACGCCAACTCACTGCGCCGGCACATCCGGCTGGCGCACTCCGACAAGTTTGACTACGCCGAGCCGATGGAGTGTCCCATGTGCAAGCAGATCTTCGCCAAGACCTCGATCAAGGCCCACATGGCCACGCATTCGACGGAGCCGCAGTATGACTGCGCCATTTGCAACAAGAGCTTCTCCACCAAATGGAATCTCAAGATCCACTCGTGGGTCCACGCCAATCGGACGGCCAAGCCCTTCAAGTGCGAGTACTGCCCCAAGGCGTTTGTGCGTGAGCTGGACTTTAAGAATCACATCAATGCCCACAAGCAGATCAAGCCGTACACGTGCGAGTACTGCGGCTGCAAGTTTATCCGCAAGTACAACTACATGCGGCATCGTCGCGAGCACCATGGCACCAAGAAGTTCACCTGCGATCAGTGCGACAAGTCCTTCCATCGGCACTACTATCTGATCGAGCACCGGCGCATGCATACCGGTGAGCGACCCTTCACCTGCACCATTTGCGGCAAGAGCTCCACCACCAAGACCAACCACAACAAGCATCTGAAGATCCATCACTCGCGCGACCCCTTCACGGTGGAGGTCTAA
Protein Sequence: MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGGGGNNSMGSALAAAMMSGGGGGGGGSDGGEASLADDKSAFTLSPQQCGDVKPVVATSPPAMSKTISAAMPVVPPAPPPLPPLSSANAAPSCTSPSASSSTSSSSSSNLSNPPMKALKCAPPTTEARANTSAHPTISSVSTQYQPSLVAPDYRFNHQQQQQQQQSGFGRGVAGTNAATLVIPQVAQQHFLASHQQQAHFTHQQQQQQQQQQQQSPLKFTYATALPPPPPLQLFTQQQQPTAASTQPHQKPPPAYGAAISQIRSQHNQIKQQQQPHQQQLQQQQSQPPHMAGQHNLTLAPPTPTAEVAGKQPSKAHAEVFLNPPPPPPPPSQAQATISIHSMGQNHHQSHPHMQHQIHQQQQLATSPSSRLQQQQQQQSLSLQTYGPVSVSSSCSSSSASNSGSAAAASGSRSSRQTNSPFGALLNAAAAVACASPATTNACSSVLRFAESPVAHYLERDNGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDEEDEEEEEEEVDDDNDREAQPEEEVDGDDERDENSRSRSRNKTTKKSRKAKPKRSSKRVSDEEEEFMSISSGCESDPETERKPESMSTTSTAPPPLCSGPSTSSAAAVASTSSNLVDIHSNSASNSASNSTSTTTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGAGRPFAAVVPIPLVKVEKEEPLDEYDDPEAAQQLEQKPSLEHGTTSVIRMASTVTATATSTPVTEEASSAEDPNEPPLMKVEVEPNTMLLPQRFSTPAQSRGPKKLVIKPKATASAATMETETKKTDTTPSSSSSSSSSSSNPSISRDLGQVQVKSETLEAPAASILEKHLTTSRSQSQHHHSAVNDDDARVLLEFANSKQPPPLAASSTTFVVNASTGFPSAGSVFASSSSSKTPSKPGEEYILPDNTNLDVDEIVISSSSSYASSAAAQVQAALQPPDFNFLYHQTTSTTATAATYPFNAFARQHQQQPPHGVSDATNAATLASSSSNSMDHDSMNASFRVAKTQSLQWYQQEQENDPQIQAEGAGVSGVSSNHSHTDVVVSHQPTNFNAALAAVDCSSVAATLDEEAKYLDLDTCKREQLSSSSNLPSVSASTSTTSSSFAGAATESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSESVYGDISQRFFRNQFSGGYNPDWRQDYYPAQDLSSAQQREHKRFDFNAIDDEASSSSRKSQLTDIVPNVATSSTSTSSALLAGPPIASTSRAAAEAAAEAAAALAQRRPHRRKLYKCPHCDSIFEKLKERNAHMISDHNYVRQNRRLICTQPPVSEPMLPPQQQQQHAQLLLQTDDAVQEDSKDGIVKIKQEQCLEKPEVEQMHHANSAELLSDVKDSELLGIGGEGDADLDGDIKPPSQLFEKSSSTLPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKVMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTEPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKSFHRHYYLIEHRRMHTGERPFTCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00491690;
90% Identity: iTF_00533258;
80% Identity: -