Dbir007935.1
Basic Information
- Insect
- Drosophila birchii
- Gene Symbol
- DMRT2
- Assembly
- GCA_008042755.1
- Location
- VNKA01005350.1:29400-31929[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-24 1.4e-20 73.0 16.3 1 47 63 109 63 109 0.99 2 2 0.89 4.2e+03 -2.2 0.0 38 46 171 179 164 180 0.83
Sequence Information
- Coding Sequence
- ATGCACATTGACGAAATGCAAAGTCCAAACAGAGGAGAGCGAGAAAGAGATCCACAGATGGCAGAACTACAGTCAGGCCTCGAGAGGGAGAACCAGGGATATGGGATGATGAGTAAGGATCAGCAGCAAGGCCAGGCCACGGAGCCCAATGCCAGAATCATCAGTCCCCGAGAGCGACGTCTACTCCGTACGCCCAAGTGTGCCCGGTGCCGCAACCATGGTGTCATCTCCTGTGTCAAGGGCCACAAGCGGCTGTGCCGATGGCGCGAATGCTGCTGCCCCAACTGCCAGCTGGTGGTGGACCGGCAGCGGGTAATGGCCGCCCAGGTGGCCCTCCGTCGCCAGCAGACCATGGAGGCCTTGgaggccaccaccaccaccaccaccatcgcCAACATCACACACAGCAGCGAGGGCGAGGACTCGCTTACCTCCACATCGCCGCCGCCAATGCAGTGCAACACCAGTGCTACCTTcgccacatcatcatcatcatcatcatcctcatccgcCACAAGACAGGCCTTGATGGCCCAGAAGAGGATCTACAAGCAGCGTTTACGGAGCCTGCAGCAGTCCACGCTTCACATCACCGCCGCCATGGAAGAATACAAGCAGCGCTTTCCCACGTTCAGCTCGCCGCTGATGGAGCGCATGCGCAAACGTCGGGCGTTCGCCGATCCGGAACTGAACCATGTCATGGAggccacgctgggcgggaacGCTTTGTACTTTGCCACCGTTGCCGCGGCcgttcagcagcagcatcaccacaACTTGTATCCATCCATGCCGCCGCCCGTGGACACGCCCAGGACACGGCTGACCCCGCACTCCAGCACCGGCAAGAAGCCCAAGCTCAGTTTCTCCATTGAGGCCATCATGGGCATCAGCACGTAG
- Protein Sequence
- MHIDEMQSPNRGERERDPQMAELQSGLERENQGYGMMSKDQQQGQATEPNARIISPRERRLLRTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEATTTTTTIANITHSSEGEDSLTSTSPPPMQCNTSATFATSSSSSSSSSATRQALMAQKRIYKQRLRSLQQSTLHITAAMEEYKQRFPTFSSPLMERMRKRRAFADPELNHVMEATLGGNALYFATVAAAVQQQHHHNLYPSMPPPVDTPRTRLTPHSSTGKKPKLSFSIEAIMGIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00490100;
- 90% Identity
- iTF_00541093;
- 80% Identity
- -