Dbip004662.1
Basic Information
- Insect
- Drosophila bipectinata
- Gene Symbol
- lov
- Assembly
- GCA_018153845.1
- Location
- JAECYF010000002.1:6276426-6284221[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.14 2.9e+02 1.1 0.0 22 40 278 298 270 301 0.85 2 2 8.1e-19 1.6e-15 56.3 0.0 1 44 789 832 789 833 0.96
Sequence Information
- Coding Sequence
- ATGTTAAAGGACGCCGACCAGGAGCTGATTAAACGCCGCCAACTGACGTCGCTCCCCATGACCGACTTCGCCCGCCAGGTGGCGCCGCCCATCCAGCTGCCACTGCCGCTTCCGTTGCCGCTCAACCTGCCGCTGCCCCTCTTGGCCAAAACCCCAGGCAGTGACCACGCCCCAATGCATTCCACACCGCCTACGACACCGCCCACGCCGCCTCCGCTGCCGCTCAACATGAGCCAGACGAAGACGTCCGAGACCAGCGGTGGCCGACAGAGTCCACCGGCCACGCCACCATCCGCGGGACCGGCCATGGCCCATGCGAGCTCCGGGCCGCAGGACCACTACAGCCTGCGGTGGAACAACCATCAGAATCACATCCTGCGCGCCTTTGACGCACTGCTCCAGACCAAGACCCTGGTGGACGTGACCCTGGTGTGTGCGGAGACCTCCATCCGGGCCCACAAGATGGTGCTCTCCGCCTGCTCCCCCTTCTTCCAGCGGGTGTTTGCCGAGACGCCCTGCAAGCACCCCGTGATCGTGCTCAAGGACTTCCGCGGCTGGGTAGTCCAGGCCATCGTGGACTTCATGTACCGCGGCGAGATCAGCGTGCCCCAGCAGAGGCTACAGACGCTAATCCAGGCCGGGGAGTCACTGCAGGTGCGCGGTCTGGTGGAGAGCTCCGTGCCGGAGCACACCCCAACCCCCGCCGCTTCGCCCGACGACTTCGGCATGCTCGACACATCCATGCTCTCCTCCAGCTTCGAGGACGATGGTCCCCCCTCAATGGTTCGCCCTTCAGCGGCGTCCGCCGGCAAGCAGGTGATGATGCCCTCCGCCGCACGAATGTTCGGCAGCCACCACTCCACCCTGCTGAGCCTGCGACGTAAGAGGGAGCAGGAACAGGAGCTAGAGAGCGACCAAGAGCTGGGGGGCAGCTCTCCGATGCCCCGACGAAAGCAAGCGCGGCCCCGTCGTCGATCCGGAGACGTTCCCCATGACTTCGCCCTCGGACCCAGCAAATCGGAGACCGAATCGCTGCAGACTGTGATCAAGCACGAACTGCTGGAACGAACGGAGAGCAATCAGGAGGAGGCGGACCAGGACACCGCAGCACGAAGGAACGACTCTGCGACGACGGACTCCTCCGAAGAGCAGGTTAAAGACAAGTCTGCAGAACAGCATCGAAATATGAGTGATTGTCGCCGACTTGATCTTGATGACGACGAGGAGGAGGAGGCGATGCAGGACCGGGACGATGCGGAGGAAGAGCAGGAGGAGGAACAGGACATTGAAGAGCTTATTCACACGACCAACGAGCTGAGGCGACAGGCTGCCGCGGCTGCTGCCAATGCGGCGGCTGCCATATCGCCCACCCCCTCGCCCTGTCCCAGCGACGGGCCGGAGGATCTCTGCACCACCAAGAAGGACAAGAAGGACAGGAGCAATCACTCCACGGCCGCTCCCTTGTCCGACTGCGAATCAAACAACAACAACAGCAGCAAGCTGCAGGACAACAACCAGCGCATCATGCTGTCCCTGAAGGATATCCGCCAACTGAACGCCAATCCCAACGCCGGCCAAAATACTCCCAGCAGTGGACCAGGATCGGGCTGCAACAACAACGGTCTGTTGAACTTCCCACCTCCGGGAATGAGGCCACCCGGACTCCCGGACAGTCCACCCTGCCACATGGAAGCTTTGGAGGCGCAGATGCATGCTGCCGCCGCCGCTGCCGCTGCAGCCGCAGCTGGCGACCATCCCTTCCACCACATGGAGCACCAAATGGAGATGTCCCTGGCCGCCGCCGCTGCAGCAGCCGCGATGCACCAGAGAGAGCCACGGGACCCCCGCGATCCACGCGACCACAATGCATTCGCCACCAACTTGCTGGGGCCCATGGGTATGTCTCCCTTCGGAGGACCCAACGGAGGAGGACCTTCGGGCCAGAGCTCTGGCCCGGGAAGTGGCGGATGTCCTGGACAGGCGCCGCACGAGAGACTCGAGGAGAGCATGAATCGGCTGAGCAAAGAGCTGGGCAAGGAGTTCGGCAAGGACTTTGCCCCCACGTCGCCCATGAGTCTGCCGGGACACTTCAATCCACCGGATGGACCTCCTCATCCGCCATCGCCGCTGCCCTTTCCTGGCATGTCCTCGGCGATGACGCTGACGCCGCCTCACATGTTCGGCCTGGACTCCCCACTCGGACTGTTTCCGCCCGGAATCGATCCTGGAAAGCTCTACAACCCGCTGATGGAAATGAGTGACCCGCGGGAAATGCCTGGCGGACCACCGCCATTCCTCAAGAAGAAAATGCCCCGACCCAAGGGACAGCACTCTGCGCCTCGAGGAGGTCCCCCTCGCTCCTGGACGAACACCGAGCTGACGGAAGCGCTCCAGCATGTGTGGAACAAGAAGATGACCACGTCGCAGGCCTCGCGCATCTTCGGGATCCCCTACAACTCGCTTCTGATGTACGTGCGGGGGAAGTACGGCAAGAGCCTAAAGCTGGAGCAACTGCGCAAGGACTGCATCAGCGGGCCGCCCATCGAGATGCTCCAGATGGGCATCAGTGGGGGCGGAGGCAGCGGGAGTGGCGGCAGCAGCTCCAGCAAAAGCGAGAAGAGCAAGGAGCGCAAGGATAAGGACAAGGACAAGAACTCCTCTGGTAGCCACAATAACTCTGGTGGCTCCGGCAACTCATCTTCGGGCGGTCCAAGTTCCGGGAACGGACCCCATCATGGCGAAATGGGACCACTAGGCTCCCTCGACTTGGAGCTGGGCTTGCCACTGGGACCGCCGGGAGGACCCCGAAGCGGCAGCTCGGAGCCGGACCTGCTAGGCGGCCCCAACGCCCTCTTCAACCCCTTTAACCCGCAGGGCTTCTACCCGGACTTTGCCGGCGGTTTCCCCGGGCTGCCCCTTAGCATGCTGAACCTGCTACCGCCATCGGAGCGACACCATGCAGCGGCCGCCATGCACCACCTGGGCGTGACCATGGACGAGGACTGCAAGTCGGTGGGCTCAAAGCAGTCATCCTCGCTGGACGACGACTTCCCGGGCTCGGGGCTGCCCCTGTCGTTGGAACAGAGGCGGGAATTGGGGGCGAACGGACCGCCGCCAGTGGCGCAGTCTAACGGGAGCGCTGGACAGGATTGA
- Protein Sequence
- MLKDADQELIKRRQLTSLPMTDFARQVAPPIQLPLPLPLPLNLPLPLLAKTPGSDHAPMHSTPPTTPPTPPPLPLNMSQTKTSETSGGRQSPPATPPSAGPAMAHASSGPQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGMLDTSMLSSSFEDDGPPSMVRPSAASAGKQVMMPSAARMFGSHHSTLLSLRRKREQEQELESDQELGGSSPMPRRKQARPRRRSGDVPHDFALGPSKSETESLQTVIKHELLERTESNQEEADQDTAARRNDSATTDSSEEQVKDKSAEQHRNMSDCRRLDLDDDEEEEAMQDRDDAEEEQEEEQDIEELIHTTNELRRQAAAAAANAAAAISPTPSPCPSDGPEDLCTTKKDKKDRSNHSTAAPLSDCESNNNNSSKLQDNNQRIMLSLKDIRQLNANPNAGQNTPSSGPGSGCNNNGLLNFPPPGMRPPGLPDSPPCHMEALEAQMHAAAAAAAAAAAGDHPFHHMEHQMEMSLAAAAAAAAMHQREPRDPRDPRDHNAFATNLLGPMGMSPFGGPNGGGPSGQSSGPGSGGCPGQAPHERLEESMNRLSKELGKEFGKDFAPTSPMSLPGHFNPPDGPPHPPSPLPFPGMSSAMTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPREMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGGGSGSGGSSSSKSEKSKERKDKDKDKNSSGSHNNSGGSGNSSSGGPSSGNGPHHGEMGPLGSLDLELGLPLGPPGGPRSGSSEPDLLGGPNALFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPSERHHAAAAMHHLGVTMDEDCKSVGSKQSSSLDDDFPGSGLPLSLEQRRELGANGPPPVAQSNGSAGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00605660;
- 90% Identity
- iTF_00566173;
- 80% Identity
- iTF_00488100;