Dbif003403.1
Basic Information
- Insect
- Drosophila bifasciata
- Gene Symbol
- dsx
- Assembly
- GCA_009664405.1
- Location
- CM019044.1:4863661-4864752[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-24 4.9e-21 74.1 10.4 2 47 41 86 40 86 0.97
Sequence Information
- Coding Sequence
- ATGGTTTCGGAGGAGAACTGGAACAGCGACACCATGTCCGACTCGGACATGATTGACTCGAAGAACGATGTGTGCGGCGgggcctccagctccagcGGGAGCTCGATCTCCCCGCGCACACCGCCGAACTGTGCCCGCTGTCGAAATCATGGCCTGAAGATCACCCTGAAGGGCCACAAGCGCTACTGCAAGTACCGCTACTGCACCTGCGAGAAGTGCCGATTGACGGCGGATCGCCAGCGGGTAATGGCTCTCCAAACGGCCCTGCGCCGCGCCCAAGCGCAGGACGAACAGCGGGCCCTGCACATGCATGAGGTGCCGCCGCCTTCGACGTCCACTACGGCCCTGCTGGGCCATCACCACCACGTCGCTGCCACCGCCCACGTTCACGCTCATCATGTCCATCCGCACCATAGCCATGGTcaccactcccactcccaccatGGCCATGTGCTGCACCAACACCAGCAGGCAGTGGCCTCAGCCGCAGCGGCTCCTTCGCAGCCGCCCCCGTCCCACCTGAGTGGGGCCCAcaatggggcaggggcaggagcagcagtgccAGCCACCGCCTCCAGCTTGCATGGTCACGCCCATGTGCATCATGTACACAtggcggctgcggctgccgcCACAGtggctcatcagcagcagcagcagcagcaccagagtcaacaacaccagcaccagcatcatCCACACCTCCAGCATCCGCAGCACCAGCCACAGCACACGGCGCTCCGATCTCCTCCACATAACGAGCACGCCGGAAGTGTTGGACCAGCCACCAGCAGCTCAGGAGGCGGAGCCAGCTCGAGCAGTGGCGCCGCTGCCCCCTCAAGCAGTGCATCCAGCAGCGGTGGAGTTGGGGGACGAGCTGGCAGTGGCGGTGTCAGTGTGATTACCAGTGCCGATCCCCACATGTCCACGGTACCCACACCGGCCCAGTCGCTGGAGGGCTCCTGTGATTCATCATCTCCCTCGCCATCGTCGACATCCGGCGCCGCCATTTTGCCGATCTCAGTATCCGTTAATCGCAAGAATGGCGCCAATGTACCGTTGGGTAAGTGCAAAGCTATATTCGTTAACTAG
- Protein Sequence
- MVSEENWNSDTMSDSDMIDSKNDVCGGASSSSGSSISPRTPPNCARCRNHGLKITLKGHKRYCKYRYCTCEKCRLTADRQRVMALQTALRRAQAQDEQRALHMHEVPPPSTSTTALLGHHHHVAATAHVHAHHVHPHHSHGHHSHSHHGHVLHQHQQAVASAAAAPSQPPPSHLSGAHNGAGAGAAVPATASSLHGHAHVHHVHMAAAAAATVAHQQQQQQHQSQQHQHQHHPHLQHPQHQPQHTALRSPPHNEHAGSVGPATSSSGGGASSSSGAAAPSSSASSSGGVGGRAGSGGVSVITSADPHMSTVPTPAQSLEGSCDSSSPSPSSTSGAAILPISVSVNRKNGANVPLGKCKAIFVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00563923; iTF_00473796; iTF_00484454; iTF_00611366; iTF_00471630; iTF_00480874; iTF_00474515; iTF_00517723; iTF_00536059; iTF_00580749; iTF_00603359;
- 90% Identity
- iTF_00474515;
- 80% Identity
- -