Basic Information

Insect: Drosophila biarmipes
Gene Symbol: -
Assembly: GCA_018148935.1
Location: JAECYG010000079.1:3928476-3950659[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00024 0.014 15.6 5.2 1 23 734 756 734 756 0.97

2 7 0.00037 0.022 15.0 0.5 1 23 762 784 762 784 0.98

3 7 0.00042 0.025 14.8 0.9 1 23 790 812 790 812 0.99

4 7 2.6e-07 1.5e-05 24.9 0.5 1 23 818 840 818 840 0.99

5 7 2.9e-06 0.00017 21.6 0.4 1 23 846 868 846 868 0.99

6 7 3e-06 0.00018 21.5 0.6 2 23 875 896 874 896 0.97

7 7 0.0007 0.042 14.1 0.4 1 23 902 925 902 925 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00024	0.014	15.6	5.2	1	23	734	756	734	756	0.97
2	7	0.00037	0.022	15.0	0.5	1	23	762	784	762	784	0.98
3	7	0.00042	0.025	14.8	0.9	1	23	790	812	790	812	0.99
4	7	2.6e-07	1.5e-05	24.9	0.5	1	23	818	840	818	840	0.99
5	7	2.9e-06	0.00017	21.6	0.4	1	23	846	868	846	868	0.99
6	7	3e-06	0.00018	21.5	0.6	2	23	875	896	874	896	0.97
7	7	0.0007	0.042	14.1	0.4	1	23	902	925	902	925	0.96

Sequence Information

Coding Sequence: ATGTCAGACATGCTGAAAATGGCAAATGTTGCAAATCCCAATCTGCTGCAAACAATGAAGAAAACAAACAACGACGACGACGAGTCCGATGAGTCCGAGATGGAAGAGGAGGAGGGAGAGGAAGACGAGGAGGAGGACGAGGACGATCTGCCGGACGATGTGGTGCTCCAAATCGACAGCGAGGACGAGGCGGAGCTGGAAGCGCAGCGCATCCGCCTAGTGGAAGAGGAAGCAGCAAAGACAACAAAAAAGGCAGAGAAAGAGCAGGGGCAGCAGCAACAAGAAACACAGCAAGCGCAGGTCAGTAACGGGAAAGCAGAGCAGCTGGAGGAAACTGGAAAAGCCAAAAACAAACACAAGCGTGGAAGGCCCAAGCGCAGGGTGTCCACTAGTTCGCAGGCTTCCAGTGCGTCCATCGCTTCCCTCGTTTCCAGTGGATCCTTGGTGGCCGCCGAGGTTCTGGCGGATGAAAAGTCACGCCGCTTCATCTACAGCTGCTCCAGCTGCTCTTACCACTACGCCGACAGCCTGATCCTTTCCAGGCACTTCCAGCAGCAGCATGCAGAGAAACCTAAGAGGAAGCGTGGTAGGGCCAAGGCTTCCCCTGAAGAGCCCCTGATGACTCCCTCCCTGAACCTTGACCTCCTGGAAATGGGCCACTTCAAGCCCTGCGCCCAGTTGCTCGTCCAAGGGGACTCCCTGCTGCAGCTGTGCCTCGCGTGCAACTCGCAGTTTGTGGATCAAGTACGCTTTCAGGAGCATCTCAGCCAGCAGCATGGTTACTTCAAGCTGCTGGTGCCAAAGGAGGAGCCCAGCGATCTCCCCCCGCAGGCCATGGTTACCATTCCGGGGGCTCTGGCTCTGGTCAAAGGCAATTCCCAGCTCCAGCTGCCCATTCCCGCCCCGGAAACTCCCCCACCCGAGCAGGACGTCAAGGAAACCCCACCAAGTACCGTGTCCAACGACAAGGAAGATTTGGCCATGATCAATGCCATGGTGGCGGAAATTGCAGCGGAGCGGGTGAAGAAAACCAGCAGTCCCAAGGTCAGCAAGATGATCATCAAGCTGCCCACGACCAACAAAAGGGGCAGAAAGCGGACCAAACCAGAGAAAATCAGGGACGAAAAGCTCAAGTCTGAGAAGAGCATTGAGAGAAAGCAGGAAAAACCGGAGAAGAAGAAAAAATTGGACAAAAAGAAGTCGGACACGGAGACCTTGCAGCCAGAGAAATCGAATGATGATGTGGAACAGCAGAAGGAGAAAACTCAAACCGAGCTGCAGCAGCCGGAAATGATTGGTACTAAGCAGTCACAGCCGGATAACGTTAAAATAGACCAACCAAAACCAGAGAAATCAGAGAAAAACTGTCATCAGTTCCTTGGGGAGGGACAGAAACCTGAGGAGCAGCCCCGGGAGAAGTCTCTAAGGGATGGACAATTGCCGCAGAAGGATTCAATGGATCAGCAATCGGTGACAAAGGATTTAGGAGAAGATCAGTCAGTGGAAAAGTCTGGTAGGGACCAGCTCTCCCATGAGAAAGATTTAAAGGAGCAGCAGTCGCTGGAGAAGTCTGGCAAGGAAAAGCAGTTGGTTGAAAAACATATCAAGGAGAATCAGCCGCCGCAAAAAAACGCACAAGAGCCAGAGCAAGGGAAGGAAGATGACACCGAGGCGAACAAGCTTGTCATTCCTAATAAAGATAGTCAGAACTTGGGTGCAGAAGACAAAGAACTTCAAAAAGATGACATGAACCAGCAGCAGCAGTTGGAAAGTCCAGGGCAATGTCAACCTCAAACAGAGAAAGCCTCCAAATTAAAAAAGCCAGAGAAGGAGCAACAGCGAAAGTCGGACAAATCGGAGATGGATCAGCAGCATCAAGCTGATGAACCTGCCATGCCAACAAAGCGCAAGCGCAGCCGCAAAGAGCGCAAGTCCCCCACACCAGTTCCCATTGCGCTAGAAGAAAAAGAAATAAAGGAGGAGCCAGAGCCCCCGGAGCGGCGCATGCGTAAGAGCCGCCACCAAGTGGACTATGTGGTGGAAGTCAAAGATGAAGAGGAAGAGGAGGACGACGAGGAGGAGGTGGACGATGACTCCTCGGCCACGGTTTCGCCCCACAACAGCTCAACGGACGAGAGCTTCACTTCAATCAAGCGTGAGTCATCCGAGGAGTCGCAGCGCAATGGAAACGGCGCGATACACACCTGTAATTTCTGTGGCAAAACCTTTAAGCGGTTCTCGAGAATGCAGGACCACCTGCGTCTGCACACCGGAGAAAAACCATACGTCTGTGGTCAGTGTGGCCGGTCTTTCCGCTTGAAGATGCGTCTGGTGGAGCACCAATTGCGTCATCGCGCCGAGAAGGCGTACAAATGCGAGATCTGTTCGATGCCACTGGCCACCAAGCAGGATTTGTCGCTGCACATGCGTCACCACAAAAACGATCGCCGCTACAAGTGCGACAAGTGCAATAAGGCATTCGTCCGCAGCTCCGATTTGTCCATCCACGTGCGGATTCACACGGGCGAAAAGCCCTACAGCTGTGACCTGTGCGGCAAGGCGTTCCGTGCCCGGCAAAACCTGGTGGTCCATCGGCGCACTCATCTCGGCGACAAACCCATTCAGTGCGAGTTGTGCGACAAGCGCTTCGCCCGCAAGATCGACATGCGGGTCCACATGCGCAGGCACACAGGTGAAAAGCCCTACAACTGCGATGCCTGTCAGCGCGGATACTCCTCCCGAGTGAATCTGCTGCGGCACCAGGAGCGTGAGCATGGCAACGGGGAGAAGGCCTCTGGCGCTGCAAAAGCCGGTAAAAAGAGTCCTGAGCCGACAAAGCAGCAGGAAAATGATCCCAAAGCCAAAGCAGCACCACGTCGCCCGCGACGCGAGAAGCTGCAGCAGAAGATTGCAGCGCAGGAGAAACTACTGCACGACCTGAAACGCAGCTTGAGTTCTCTTCCAGAAATATCAGAGGAGTCAACGCAGGCCAAACTCGACGGAGCTGGTCAGGAACTACCAGCAGATGCGGGAGCAGGGCTTGCTCAAGTCCAAGTCACGGTGTCCATGCAAATGGAACCGGCACCAAATCCCGAAGACGACGAGGAGACCACGCCGGAGAAGGAGAACGCCTTGTCCAGCTCGACGACTGCCGATGGCAAGACCAAGGCAAACCGCAAGATTACCAGCTACTTCACTGTGGTGGGCCAGCAGGCGGAAATCTAA
Protein Sequence: MSDMLKMANVANPNLLQTMKKTNNDDDESDESEMEEEEGEEDEEEDEDDLPDDVVLQIDSEDEAELEAQRIRLVEEEAAKTTKKAEKEQGQQQQETQQAQVSNGKAEQLEETGKAKNKHKRGRPKRRVSTSSQASSASIASLVSSGSLVAAEVLADEKSRRFIYSCSSCSYHYADSLILSRHFQQQHAEKPKRKRGRAKASPEEPLMTPSLNLDLLEMGHFKPCAQLLVQGDSLLQLCLACNSQFVDQVRFQEHLSQQHGYFKLLVPKEEPSDLPPQAMVTIPGALALVKGNSQLQLPIPAPETPPPEQDVKETPPSTVSNDKEDLAMINAMVAEIAAERVKKTSSPKVSKMIIKLPTTNKRGRKRTKPEKIRDEKLKSEKSIERKQEKPEKKKKLDKKKSDTETLQPEKSNDDVEQQKEKTQTELQQPEMIGTKQSQPDNVKIDQPKPEKSEKNCHQFLGEGQKPEEQPREKSLRDGQLPQKDSMDQQSVTKDLGEDQSVEKSGRDQLSHEKDLKEQQSLEKSGKEKQLVEKHIKENQPPQKNAQEPEQGKEDDTEANKLVIPNKDSQNLGAEDKELQKDDMNQQQQLESPGQCQPQTEKASKLKKPEKEQQRKSDKSEMDQQHQADEPAMPTKRKRSRKERKSPTPVPIALEEKEIKEEPEPPERRMRKSRHQVDYVVEVKDEEEEEDDEEEVDDDSSATVSPHNSSTDESFTSIKRESSEESQRNGNGAIHTCNFCGKTFKRFSRMQDHLRLHTGEKPYVCGQCGRSFRLKMRLVEHQLRHRAEKAYKCEICSMPLATKQDLSLHMRHHKNDRRYKCDKCNKAFVRSSDLSIHVRIHTGEKPYSCDLCGKAFRARQNLVVHRRTHLGDKPIQCELCDKRFARKIDMRVHMRRHTGEKPYNCDACQRGYSSRVNLLRHQEREHGNGEKASGAAKAGKKSPEPTKQQENDPKAKAAPRRPRREKLQQKIAAQEKLLHDLKRSLSSLPEISEESTQAKLDGAGQELPADAGAGLAQVQVTVSMQMEPAPNPEDDEETTPEKENALSSSTTADGKTKANRKITSYFTVVGQQAEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00602840;
90% Identity: -
80% Identity: -