Basic Information

Insect: Drosophila basisetae
Gene Symbol: -
Assembly: GCA_035041595.1
Location: JAWNLB010000123.1:6406014-6408496[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.046 2.8 8.4 2.0 1 23 393 416 393 416 0.91

2 7 0.63 38 4.8 2.3 2 23 591 614 590 614 0.90

3 7 0.039 2.4 8.6 0.5 2 21 626 645 625 646 0.95

4 7 1.1 65 4.1 3.0 1 20 661 681 661 683 0.93

5 7 0.00041 0.025 14.9 1.0 1 23 712 734 712 734 0.97

6 7 3.5e-06 0.00021 21.4 0.9 1 23 740 763 740 763 0.97

7 7 2.9 1.8e+02 2.8 0.0 1 14 769 782 769 786 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.046	2.8	8.4	2.0	1	23	393	416	393	416	0.91
2	7	0.63	38	4.8	2.3	2	23	591	614	590	614	0.90
3	7	0.039	2.4	8.6	0.5	2	21	626	645	625	646	0.95
4	7	1.1	65	4.1	3.0	1	20	661	681	661	683	0.93
5	7	0.00041	0.025	14.9	1.0	1	23	712	734	712	734	0.97
6	7	3.5e-06	0.00021	21.4	0.9	1	23	740	763	740	763	0.97
7	7	2.9	1.8e+02	2.8	0.0	1	14	769	782	769	786	0.80

Sequence Information

Coding Sequence: ATGCCCGCCCACTGTGCGGTGGTCAATTGCAGcgataaatatgtacattccGGCAGCATATCCTTTCACAGATTTCCATTTAAGCGCAAGGATTTGCTGCACAAATGGAAGGATTTCACACAACGCAGTGGCCAATGGATGCCCTCGAAGTGGAGTGCGGTGTGCAGTCGCCATTTCAGAGATTCCGActtcaattgcagcaacaatcgcAAAACGTTAAAAAAGAATGCGGTGCCCACATTGCGACTGCTGCCCGAGGATGCCGAATCCCTGCAAGTGGaccaacagcgacagcagcagtcggcgccagcagcagcgactgaaACCCCAacgagcaactgcagcaagagCACGTGTCGCTTCTGTGGCAACACGGCGCCAAATTGTGTGTCCTTCGACAAGAGTTTCGAACTCTTTGGCATGATCCAGAAATGTTTTCCCACACTCCAAATTCTGCAGGATGATACACTGCCGCTGCCCAAAGATATTTGTGGCGATTGCTgcaggcagctgcagcgcTTCTCGCAGTTCTGCGATGTGGTGATGCTGGCACAAAGTGAACTCCAGCGCAAATATCGGCGACAGCTGAAGATCAAACAGGAGCCGGTGGTGCGTGTGAAGCAGGAGGCATGCGAGAGTCTCGACAATCTCTTTCCCGACGAGCTGGACATGGGCCTGGACGAAGCGTGCTGTGATCACGAGCCGGAGCCACACGATGAGACCGAACAGAAGTTTCAATTCTGTGATTTCAATCCGCAGGACATCATCAACAATTGTGATATTATGGAGATTATCAACCTGGATGATCCATTTATCAATATAACCGATGATGCAGATGTGCCGCAGCCCGTGCCCGTATTGCCCACAGCGCAGGAGTTGCTGCAATCGGAGCTGCTCACCGAGGAGCACAACTATGCCAAGGAGGGTTGGCAACTGACGCCGTTGCAGCAATATAAAACGGAGAAAGTGGAGggcattgaattgaatgaagcagttgctcctcctccagctgctccagctccgaGTGAGACGCGCAGCTGCAAGCCAATTGTGACCAATGTCAGCCAGATACCCAATCCGATGATCTGTGAACTGTTGCCACCGCCAGCGACGAGCAACAAGCCCAACATTGTCGTCCTCAACGATAGTGTGGTGCAATCTTCAGCATTCCGTCTCCACGATTGCAACCTGTGTAGCAATAAATTCTTTACGGCGGAGAGTCTGCAGCAGCATTATACACAGGCACATGGTACGCCCACAGAGACGCCGCCGTCTgctccccctcctcctccttcagcacctgctgctgctcctcctcctgctgctgttcctcctCCTCTGCCTGCTCCAACTGCTGGTCCTTCTCAAGgacctgctgctcctgctcatCCTCCTCCCGCTCCCATGGTTAGCGTTCCTCCTCTAAACATCAGTCTCTCCAGCGCAGGCAGCTGCCTCAAGCTGGAGGCCAGCAGCTCCTTGTCGCTACCAGCTGCCGCTGTGGACTACTGGCAAGCGGATTGGTGGCCCGCTGCTCAGTTGCCGGCCAAGACTAAGATCGATATACTGGACATGCAGCGTAGTTTTCTGCATTGCAACGATCTGATTGCCATGCCACCAGCAGTGAGTCATCAGCAATCAGTCGATGTGCAGCCACTGGCCTATGCAAAGTTGGCGGCACGTTTCCGCCGGCTGCAACACAAGTGCCGCCagctgcggcaacaacaacaacagcgttaTCATCATCCACATCCCGCTAATCACCGGCTGCATTGCGGACGCTGCAAACGTGGCTTTGGCAGCGTGCAACTACTGTTGCAACATCGTCGCAGGAGGCGACATTTTGTGGTGCCACCGCAACGCACATTTGCCGTGCGCTGCTTTGGCTGTCTCCGACTGTTTCGCACGCGTCTTGGCCTGCGTCAGCATATGCGTTACATCTGCCAATCGCTGCCGTTGCGTAATGCTCGGCTGCAGAGCTACAAGTGCCGGCACTGCCAGAGCATCAGTTTCACCCACTGGCGCGTCTATCGGCGGCACGAACTCAAGTGCAAGCAGCGGCaggcgaacagcagcagcagaaatcgCCATTCAGGCAAACGACGCAGATCGCATCCGGCTCAAAGAACCCACCACAGTTGCGGCATTTGCCAGAAGATCTTCGGTTCGTTGACGGGTTTGAAGCAGCATCGGATTACGCACAGCTCGGAGCGCCGCTATAAGTGCAGCATTTGTGAGCGCGTGTTCAAGCGACGTAATGGTCTATCCCAGCACATCAGGGGCTATCATCTGCACTTCAAGCCGCACGAGTGTCCTGTGTGTCAGCATCGCTATGCCCTCAAGGGCGACATGCTGCGCTGCCGGCACTCGCAGCGACGGGGCGTCAGTGTCAACGAAACTGAGCAGGCGAAGACTGTTCAGCATTAG
Protein Sequence: MPAHCAVVNCSDKYVHSGSISFHRFPFKRKDLLHKWKDFTQRSGQWMPSKWSAVCSRHFRDSDFNCSNNRKTLKKNAVPTLRLLPEDAESLQVDQQRQQQSAPAAATETPTSNCSKSTCRFCGNTAPNCVSFDKSFELFGMIQKCFPTLQILQDDTLPLPKDICGDCCRQLQRFSQFCDVVMLAQSELQRKYRRQLKIKQEPVVRVKQEACESLDNLFPDELDMGLDEACCDHEPEPHDETEQKFQFCDFNPQDIINNCDIMEIINLDDPFINITDDADVPQPVPVLPTAQELLQSELLTEEHNYAKEGWQLTPLQQYKTEKVEGIELNEAVAPPPAAPAPSETRSCKPIVTNVSQIPNPMICELLPPPATSNKPNIVVLNDSVVQSSAFRLHDCNLCSNKFFTAESLQQHYTQAHGTPTETPPSAPPPPPSAPAAAPPPAAVPPPLPAPTAGPSQGPAAPAHPPPAPMVSVPPLNISLSSAGSCLKLEASSSLSLPAAAVDYWQADWWPAAQLPAKTKIDILDMQRSFLHCNDLIAMPPAVSHQQSVDVQPLAYAKLAARFRRLQHKCRQLRQQQQQRYHHPHPANHRLHCGRCKRGFGSVQLLLQHRRRRRHFVVPPQRTFAVRCFGCLRLFRTRLGLRQHMRYICQSLPLRNARLQSYKCRHCQSISFTHWRVYRRHELKCKQRQANSSSRNRHSGKRRRSHPAQRTHHSCGICQKIFGSLTGLKQHRITHSSERRYKCSICERVFKRRNGLSQHIRGYHLHFKPHECPVCQHRYALKGDMLRCRHSQRRGVSVNETEQAKTVQH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00500666;
90% Identity: iTF_00525522;
80% Identity: -