Basic Information

Insect: Drosophila basisetae
Gene Symbol: -
Assembly: GCA_035041595.1
Location: JAWNLB010000147.1:4344952-4349008[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9.7e-05 0.006 16.8 0.1 1 23 149 172 149 172 0.96

2 14 0.0015 0.094 13.1 2.9 2 23 221 243 217 243 0.89

3 14 0.013 0.81 10.1 0.9 1 23 359 382 359 382 0.93

4 14 0.16 10 6.7 5.5 2 23 431 453 430 454 0.95

5 14 0.0035 0.21 12.0 0.5 1 23 517 540 517 540 0.88

6 14 8 4.9e+02 1.4 0.0 2 13 559 570 558 575 0.81

7 14 0.00073 0.045 14.1 3.3 2 23 591 613 591 613 0.96

8 14 0.00084 0.051 13.9 0.1 1 23 724 747 724 747 0.95

9 14 3.9e-05 0.0024 18.1 0.4 1 23 796 819 796 819 0.95

10 14 0.00069 0.042 14.2 2.3 2 23 869 891 868 891 0.97

11 14 0.0026 0.16 12.4 1.4 1 23 978 1001 978 1001 0.91

12 14 0.051 3.1 8.3 2.3 1 21 1053 1073 1053 1074 0.95

13 14 0.033 2 8.9 0.6 3 23 1114 1137 1113 1137 0.96

14 14 4.5 2.7e+02 2.2 0.5 1 13 1155 1167 1155 1179 0.65

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9.7e-05	0.006	16.8	0.1	1	23	149	172	149	172	0.96
2	14	0.0015	0.094	13.1	2.9	2	23	221	243	217	243	0.89
3	14	0.013	0.81	10.1	0.9	1	23	359	382	359	382	0.93
4	14	0.16	10	6.7	5.5	2	23	431	453	430	454	0.95
5	14	0.0035	0.21	12.0	0.5	1	23	517	540	517	540	0.88
6	14	8	4.9e+02	1.4	0.0	2	13	559	570	558	575	0.81
7	14	0.00073	0.045	14.1	3.3	2	23	591	613	591	613	0.96
8	14	0.00084	0.051	13.9	0.1	1	23	724	747	724	747	0.95
9	14	3.9e-05	0.0024	18.1	0.4	1	23	796	819	796	819	0.95
10	14	0.00069	0.042	14.2	2.3	2	23	869	891	868	891	0.97
11	14	0.0026	0.16	12.4	1.4	1	23	978	1001	978	1001	0.91
12	14	0.051	3.1	8.3	2.3	1	21	1053	1073	1053	1074	0.95
13	14	0.033	2	8.9	0.6	3	23	1114	1137	1113	1137	0.96
14	14	4.5	2.7e+02	2.2	0.5	1	13	1155	1167	1155	1179	0.65

Sequence Information

Coding Sequence: ATGGAAGGTATGGACCTGTGGACGTCCATGTTTTCGGCTGACTTTGAAGAGGCTGATGCTGGGCCAAAGAGTCACGGTTATGCAGACGAGTTTATGGGCGATGATGATGCGGATGAGCAGGAgactgctgatgatgatgttgatgctggGAAAGGACCTGAGCCAGATGACGATGccatatttgattttgaaatggaGCCAATTGTTAGCATTGCGGAACCCGAACCAGCGCCCAGACCAACTGTCCGATTGGCGCCACCAGTGCCAGTTGCTCCGCCCGTTCGGCCCCAGCAGCATAATCTTCAGTCAACGGTTaactccacctcctcctccatgATGGGAGGTCGCGGTAGTGCTGCCGCGCCACCGACACGACCTACAACATCGCAAATCAATGCCACAGATGAGAACGGAGTGCCCATTAACTATGAACTGGGCGTCATCTATATATGCCCGGCTTGTGGTGCCGAGTTCCGGCAACAGGATATGTGGAAGCGTCACATGAACCAGATGCATCAGTATAACACTCGCCGTGGCCTCAACTTTGTTGGAATTGATAAGCTGTATCATCGGTGCCTGGAGTGCAACAAGCGGATTGCTATGCACAGCCGGGAGAATCTGCTCAAGCACAAGTTCACCCATTTGCCATATCGTTGCACCAAGTGCTACATCTGCAAGCGCGAGTACAAGTACAGACAGGACCTGATGGTGCATCTGCGCATGGTACACTGTGACGAGGTGGTTGCCATGATGCGTGGCGGTGACGCCAGTGCTGGACGCAAGACGCGAGTCCGTGAGCCGCGCGTCGAGCAGCGTGCTCATGGTGCGTCTCGGTTCGGGCCGATGAGCCATGGACCGGTTCgtgacgatgatgatggtaTCGAGGTCAAGAATGAGCTGATGGACACGGAAGCAACGGCTGCCGATGATGTGGCTGACGAACAGAATCGCAGCTTCAACCAAGCAAAGAAGAAGCGTATTAATCAATCGGCCGGCTCTGCAAGCGCTGGCAAAGCCGACAACgacagtggcagtggcggCGGCGCTTCGGATATCTGCGAAGATTACATACACTACATGTGTCCCGATTGCGGCACCGACTGCGACACGCACGCCCAGTGGAGCCAGCACATTGAATTCGTGCACGACTATGTCAGCCGACGCGGACTCAATTTTCGTTGCGTGGACATGCAGATGCAGTGCCTCGAATGCAAGGAGTTTGTCATCCCAAACACAATCAAGACACTGCGCGCACACAAATTCAGTCATTTGGCTCAACCGGATTGGATGCGTTGCAAGCTGTGCTATCGGGGTTATACGGATCATCATGAGCTGGTTACGCACCTGCTCAAGCAGCATCATCTGGAGACATTAATACCCGAAGacgagcaggagcagcaaacgCTCAGTGGCAGTGCCGGCGATGATGCTGAGGAAAACTCTGGCATCGGCAATGGCTGCGATGATGAATCCCTCTTGCAATTTGAGGATGTGCCCCGTCGTGGCGGTCGCATTGGCGGCGATGATATGTATGAGCCGCATATTGATTATCTGTGCCCGCAGTGCGGCCGCGAGTTTATTGAGAAGAAGCACTGGCGCACACATGTTGTCCAGGTGCATGGCATGAACGATCTGGCCAAGCTGAACTTTGAGGTCATCAACGATCGTCAGCTGAAATGCACAGAATGCGAGAAGATCATCACGAATGCCTACGGCATTCAAAATGCTCAGCAACACCGGATTACTCATTTGCCCTACAAGGCATATGCGCGCTGTcgcaaatgccacaaatcgTATACAGATCGCAAGGGTCTGGTTAAGCACTTGGCCACATACCATTGCGTTGGCTATGAACCGCGCAATTCCGGTGCTGGAGGAGCGGCAGTCGGTGCAGGACAGAGCCAGGTCAAGTCACAAACGCCgcgcaaacaaattgttactGTTGCCAATGAAACGTATGAGATTATCTATTTGGATGACGAGCAATCACCgccaaataacaataatgttaATGAGGAGAATGATTTTGGCGAGCAAATGCAAGCGGATGAAGATGACTATGCCACCAGCTGCACAAGCACACGCCAGTTGCCACCAGCTactgcagctgcggctgctcctgctgctgctgctgccactacCTCTGCGTCCAATCAAAATGCGAATCGTTATAAATGCGTTGATTGTGGTTCCCTGTTTGCCACGCAGGCGGCGCTCAAGACGCACATTAGCGAGGAGCATGATTTTATGGACACGCAGTATAGCGCTAAAAAGTTTGATAATGCCGAACACGCAGAGGAgacgacgccagcagcagcgtctgTGGCGGCCACTTCACCTCCCAAAATCTTTTCTGGCGGCTCGACAATCGAacagaattatatatatttgtgcccCTCCTGCGGCAAGCCATATAAGACGCAATTCGAGTGGCGTCGCCACATCAACAAGGAGCACAACTTCGATAAGCgacaatatttgaatatgcgCCAGCTGGACAAGTATCGTTATCAGTGCACTCAGTGCAAGGACATTGTGAGCAATTCGAAGCTAAAGGGACTGCAGGATCATCACTTCAGACATTTGCCCTATAGACTCTACTTAAAGTGCCTCATTTGCGGCACCTGCTACAATCATAAGCCCAACATTGCCGCACATCTGCGTACGCGCCACAACATCTTTGAGCGTGACACGCCCTGGCGCGAAATGCAGCCGAAGCCTCAGAATGGCTATGACACCATCAAATATAAGGATAAGGATATGCCAGTCATGTCCGGCACGACGTCAGATTCGCCAAcgcctggcagcagcagtaacagtgCTCGCTCACTGAAACCGCAGCCCGGTTTGCTGCCTATGCGGCCCGCTGGCCTAAACACACTGGAGGATAGCATCTCCTATCACAATGCCGTCGATCTGGATTTTATAACCTACTTCTGTCCCGAGTGCAATAAGAACTTTGATTCGCATGCCTTCTGGCGCAAACACATTGTCGAGCAGCACAATTTCAACAGCCGGCAAGGCTTGAATTTTCGTCAGATCGACAATCATCACTATCTGTGCCTGGAGTGCTACAAGCGGGTGACAGTCACCCACACCAAGGGCGCCATTGGGCAGCTGCAGTCGCACAAGTTCCGACATCTTCCCTATCGCTCATTTAAGTGCTTAACCTGCAACGGCAAATTTGTGCGaaagcaaatgtttttcaagCATTTGAACCGTGACACAAATCGCTGCGACAGCGAAAATCATAGTAACGAGGAACACATCTCCGAGCAGCCGGAGGAGAGATCTTCGTCCGCAAACGATGCATCCGAGGCCGCCTCGTATCGCTTGCTGTGCCCGCAGTGCGGCGATAACttcagcaccagcaccaaaTCCCTCTGGCGTAAGCATATAAACACTCAACATGGTCTGAGCAAGCTGGAGGTGCTGCACATGTCCAAGCTAACCGACGAGCTCTATCGCTGCGTGGACTGCGATGAGAAGCTGGAAACGAAACAGCTGCGTgtgctgcaacagcatcgcTTTCGCCATTTGCCCTATGCCGCCTACATACGTTGCCAGCTGtgcgagcaacagcagccggatGAACTGGGTCATGGTCCCGTTGCAGCCGGGATGCACAGCATGTGTGAGCTGCAGCAACACATGCGCGACGAGCATCCCTCGTTTGTAGAGAACGATGAGCAAATGCAGTTGCTCGTCGATGTGGACGCTGAGGAGAGCCACCCGATAGCGGTGGCAAGCAATGAGGCATCTGACAATGGGTCATatatgccgatgccgatgcaaATGCCCCTCGACggcgatgaggatgaggacaGCCAAACGGCGGCAGCTAACAATGAGACGTCCGACAATGGACCATATATGCCCCTGCCGCCGCATTTACTGGAGGAGGACGTAGACGACTTGGAGTTCGAAGATCAATATCTACTGAGCTAA
Protein Sequence: MEGMDLWTSMFSADFEEADAGPKSHGYADEFMGDDDADEQETADDDVDAGKGPEPDDDAIFDFEMEPIVSIAEPEPAPRPTVRLAPPVPVAPPVRPQQHNLQSTVNSTSSSMMGGRGSAAAPPTRPTTSQINATDENGVPINYELGVIYICPACGAEFRQQDMWKRHMNQMHQYNTRRGLNFVGIDKLYHRCLECNKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRMVHCDEVVAMMRGGDASAGRKTRVREPRVEQRAHGASRFGPMSHGPVRDDDDGIEVKNELMDTEATAADDVADEQNRSFNQAKKKRINQSAGSASAGKADNDSGSGGGASDICEDYIHYMCPDCGTDCDTHAQWSQHIEFVHDYVSRRGLNFRCVDMQMQCLECKEFVIPNTIKTLRAHKFSHLAQPDWMRCKLCYRGYTDHHELVTHLLKQHHLETLIPEDEQEQQTLSGSAGDDAEENSGIGNGCDDESLLQFEDVPRRGGRIGGDDMYEPHIDYLCPQCGREFIEKKHWRTHVVQVHGMNDLAKLNFEVINDRQLKCTECEKIITNAYGIQNAQQHRITHLPYKAYARCRKCHKSYTDRKGLVKHLATYHCVGYEPRNSGAGGAAVGAGQSQVKSQTPRKQIVTVANETYEIIYLDDEQSPPNNNNVNEENDFGEQMQADEDDYATSCTSTRQLPPATAAAAAPAAAAATTSASNQNANRYKCVDCGSLFATQAALKTHISEEHDFMDTQYSAKKFDNAEHAEETTPAAASVAATSPPKIFSGGSTIEQNYIYLCPSCGKPYKTQFEWRRHINKEHNFDKRQYLNMRQLDKYRYQCTQCKDIVSNSKLKGLQDHHFRHLPYRLYLKCLICGTCYNHKPNIAAHLRTRHNIFERDTPWREMQPKPQNGYDTIKYKDKDMPVMSGTTSDSPTPGSSSNSARSLKPQPGLLPMRPAGLNTLEDSISYHNAVDLDFITYFCPECNKNFDSHAFWRKHIVEQHNFNSRQGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCNGKFVRKQMFFKHLNRDTNRCDSENHSNEEHISEQPEERSSSANDASEAASYRLLCPQCGDNFSTSTKSLWRKHINTQHGLSKLEVLHMSKLTDELYRCVDCDEKLETKQLRVLQQHRFRHLPYAAYIRCQLCEQQQPDELGHGPVAAGMHSMCELQQHMRDEHPSFVENDEQMQLLVDVDAEESHPIAVASNEASDNGSYMPMPMQMPLDGDEDEDSQTAAANNETSDNGPYMPLPPHLLEEDVDDLEFEDQYLLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00517225;
90% Identity: iTF_00577291;
80% Identity: -