Basic Information

Insect: Drosophila basisetae
Gene Symbol: -
Assembly: GCA_035041595.1
Location: JAWNLB010000013.1:908391-912880[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.14 8.5 6.9 0.0 1 13 350 362 350 370 0.81

2 8 8.6e-05 0.0053 17.0 2.1 1 23 713 736 713 736 0.96

3 8 0.00087 0.053 13.8 3.4 1 23 765 787 765 787 0.97

4 8 0.00011 0.0067 16.7 6.5 1 23 793 815 793 815 0.97

5 8 3.8e-05 0.0023 18.1 0.9 1 23 821 843 821 843 0.98

6 8 0.00061 0.038 14.3 1.4 1 23 849 871 849 871 0.98

7 8 0.011 0.7 10.3 0.0 2 23 878 899 877 899 0.96

8 8 0.017 1.1 9.7 0.1 3 21 907 925 905 926 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.14	8.5	6.9	0.0	1	13	350	362	350	370	0.81
2	8	8.6e-05	0.0053	17.0	2.1	1	23	713	736	713	736	0.96
3	8	0.00087	0.053	13.8	3.4	1	23	765	787	765	787	0.97
4	8	0.00011	0.0067	16.7	6.5	1	23	793	815	793	815	0.97
5	8	3.8e-05	0.0023	18.1	0.9	1	23	821	843	821	843	0.98
6	8	0.00061	0.038	14.3	1.4	1	23	849	871	849	871	0.98
7	8	0.011	0.7	10.3	0.0	2	23	878	899	877	899	0.96
8	8	0.017	1.1	9.7	0.1	3	21	907	925	905	926	0.91

Sequence Information

Coding Sequence: ATGACGCCAGCAGCTGTTGAGGATGGGCGTGAAAAATGCGGCAGCGTCTACACTTGGAACTGTGCTGGCGAACTCTATGGCATCGAGTGTGAGTTATGCGAGGAGCGACCCCTTTGTGCACTCGATGAGTTTGCCGAGCATATGGAGCTGTGGCACTCCGACTGGCAACAGGCACCGGAGGATGAGCTCATGCAGGAGGTCCTCGCCGAACAGtccagcagcaactgcgaGGTCAATGAACTCAAACAGCAGCTGGTTCAAGAGCTCAACTCGCTCGAtaaacagccacagcagcaaccacagccacagcagcaaccacagctgATGGACACATTTCAACTGAACGATCAAGTTCAGTTCAATGCGCATagtgGCCTCCCCAGTGTGGAAACGGCAGCGAAGCTGACGACGGAGCATGTGCAGCAGCTGATTGAGCTATATCGATCGCATCCGCGTCTGTGGGATCAATCGCATCCAGAGTTTCGGGACGTGGAGCAGTGTCGCCACTCGTGGCGCCAGATAACGGATGCGTGGAGTGCCCACTGCGGACGTGGCTTCAGTGTGACCGATGTGCGCATCCGGATCTCAACGCTGTGCCAGCGATTCCTCAAGCAGCGTGAACGCATCGATGCCGAGGGTGATCTCGATGAGGGCGCCAAATTCGTGCACTACGATCAGCTGCGCTTCCTCTGTGAGCAGCAGGCGCTGCTCAAGCGCCAGAAGCACTTTGCACGCGAGAATCGCAAACTGCTCGAGATCTACGAGCATTATCCAATACTATGGCACAATGCCCACAAGAGACTGCGCTGCGCCGCAACGGTGAAGAGGCGCCACGAGGCACATCGTGGCCTCCAGCTGGCGCTGCGTATGTGCGGCATCAATCTGTCCGGCTTGGCGATGCAGCGGCGACTCCAGTCGCTGAGGAAACGCTATCGCCTGGAGAAGATACGCTATCTGCACAGTGTCGTCGAGGGCAAGCAATCGGAATTTGTGTCCATCTTTGAGCATTATGCCGAAATGGAGTTTCTGCACAAGCACATCGATCCCTATGTCTGTGCTGGCTGCGGCAAAATCTTTGAGAATCTGATCGGTCATCAGGCGCATGTGCAGGATAGCTGCGAGGAGCAATCACTGGCTGCCACCGACTGCAAACAGTTGACCGAATCGGATGCGACGCTGGGCGAGCTTATGGCGCAGCTCGAGCAGCACGatttacagcagcagcagcagcaataccaGCCACAGTCTACCGGAGAAGAACCCGAGCAACTGCAGGTAGTGGCACAAgtggaacagcagcaggagcagctggtGGCAGCGGCAACTACAACTGAGCTAGCCACGCCACTGCTGCATAGTCTAGCAGAACAGGAGGATGCGCAGCAGGCGGAGATTGAGCAATATCCTGACAAGGAAGATCTGCACGGCAAAGAGTCCTTCTCCGAGGATAGCCTGTCGACGGGTGGACAGCTACGGATGCGCCTCAGCCTGGAGCTGACCAATAAACTGATTGAGCTCTATCAGTCGCATCCAAATCTCTGGGATCCCAATCATCTGGACTATCATGCGAGGAAACAGCGACGCCAGGCCTGGCACAACATTGCCGCTCAGCTGAATACATTCGCCGGCTGTCCGGATCGCTTCAGCTGGCAGATGTTGCATCGCAAGCTCACCGATTATGTCAAGTACTATCGACGGGAACGCCAGCGCGAGGAACTGGCGGTTGGAGGTGGTGGCGAGGGCACACGTTGGGGCTTCTACGAGGCGTTCAGCTTTATGGACGATGTGGTGCCCATAAATCGTGTGCTGCAGAAATCGTTGCAACAGCGCGACAGCAATCTGAAGATCATCCAGGTGTATCAGAGCTACGAGCAGCTGTGGTGCACCACACATCCGGATTATACGAAGCGGAAGCAGCGCTTGCGTCACCTGGAATCGCTGTGCACCCGCCTGCAGGAGGAGTGCAATCTGCAGATAACCGTTGAGCGTTTGAAGAGTCGTCTGATCGAGTTTCGCTGCCAGTATCGTCAGTGCAAGGAGGCACGCCAGGCGGCGCTGCAGCGCAGCAACGCCAACTGGCAGCCGACCTATGAGTATTATGCGGCATTGCAGTTTCTCGAACTGCACGTGTCGCCATTCAACTGCGAACGGTGCACGGCGAGCTTTAAGCGGCGCAGCGATTATCTGCGGCATCAGCGCAACGTCCACTTGGACCAGCAGCTGAATGAGATGCAGCCGTTGCAGCGACGCCGTCGCATGCGACGTGGCACGAATGCGACAAATCCGCTGGAGCACATCTGTCACATTTGCGCAATGAAATTCTCGTTGCGCACCAGCCTCCAGGCGCATCTGCGTCGCCATTTGGGTCAGCGGACACACTGTTGCACCGACTGCCCCAAGAAGTTCTTCAATTCGACATCGTTGCGGGTGCATCAGCGCAGCCACACCAAAGAGCTGCCGTATGTGTGCGAGCATTGTGCCCGGGGCTTTGTCAACGCCAGCAAACTGAATCAGCATGTTAAGCGGCACACGGAGAAACGGGATTATCCGTGCACGCGCTGCGACAAGGCGTTCTACACGGCCCACGAGCGAGATCGCCACTTGCGCGCCCATCTCAACATTAGGGACAAGGTGTGTCCGTATTGCAGTCGGGCCTTTGTCGTTGGCAGCGCCTATTATGCCCATCTTAACTTGCATCGGGGCGAGAAGCGTTATGGTTGCGCTGCATGTGGCAAGCGATTCGCTCAATATGCGGGTCTCTATAAGCATCGCAAGCGCTGCACAATCGCCCAGCTGCAGGAGAAGTGA
Protein Sequence: MTPAAVEDGREKCGSVYTWNCAGELYGIECELCEERPLCALDEFAEHMELWHSDWQQAPEDELMQEVLAEQSSSNCEVNELKQQLVQELNSLDKQPQQQPQPQQQPQLMDTFQLNDQVQFNAHSGLPSVETAAKLTTEHVQQLIELYRSHPRLWDQSHPEFRDVEQCRHSWRQITDAWSAHCGRGFSVTDVRIRISTLCQRFLKQRERIDAEGDLDEGAKFVHYDQLRFLCEQQALLKRQKHFARENRKLLEIYEHYPILWHNAHKRLRCAATVKRRHEAHRGLQLALRMCGINLSGLAMQRRLQSLRKRYRLEKIRYLHSVVEGKQSEFVSIFEHYAEMEFLHKHIDPYVCAGCGKIFENLIGHQAHVQDSCEEQSLAATDCKQLTESDATLGELMAQLEQHDLQQQQQQYQPQSTGEEPEQLQVVAQVEQQQEQLVAAATTTELATPLLHSLAEQEDAQQAEIEQYPDKEDLHGKESFSEDSLSTGGQLRMRLSLELTNKLIELYQSHPNLWDPNHLDYHARKQRRQAWHNIAAQLNTFAGCPDRFSWQMLHRKLTDYVKYYRRERQREELAVGGGGEGTRWGFYEAFSFMDDVVPINRVLQKSLQQRDSNLKIIQVYQSYEQLWCTTHPDYTKRKQRLRHLESLCTRLQEECNLQITVERLKSRLIEFRCQYRQCKEARQAALQRSNANWQPTYEYYAALQFLELHVSPFNCERCTASFKRRSDYLRHQRNVHLDQQLNEMQPLQRRRRMRRGTNATNPLEHICHICAMKFSLRTSLQAHLRRHLGQRTHCCTDCPKKFFNSTSLRVHQRSHTKELPYVCEHCARGFVNASKLNQHVKRHTEKRDYPCTRCDKAFYTAHERDRHLRAHLNIRDKVCPYCSRAFVVGSAYYAHLNLHRGEKRYGCAACGKRFAQYAGLYKHRKRCTIAQLQEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01322149;
90% Identity: iTF_00499824;
80% Identity: -