Basic Information

Insect: Drosophila basisetae
Gene Symbol: -
Assembly: GCA_035041595.1
Location: JAWNLB010000144.1:14726469-14730434[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.2 74 4.0 5.3 2 23 358 380 357 380 0.96

2 17 7.1 4.4e+02 1.5 0.0 1 23 387 412 387 412 0.88

3 17 0.019 1.2 9.6 1.8 2 23 423 444 423 444 0.93

4 17 5.6 3.4e+02 1.9 3.0 2 17 455 470 454 481 0.75

5 17 0.026 1.6 9.2 0.3 3 23 514 534 512 534 0.95

6 17 0.0014 0.087 13.2 0.2 1 23 542 565 542 565 0.98

7 17 3.5e-05 0.0021 18.2 0.2 2 23 570 591 569 591 0.97

8 17 0.00024 0.015 15.6 0.3 1 22 639 660 639 663 0.91

9 17 0.057 3.5 8.1 2.8 3 21 670 688 670 689 0.93

10 17 0.013 0.82 10.1 0.6 1 23 708 733 708 733 0.96

11 17 0.012 0.74 10.2 1.4 2 23 749 771 748 771 0.93

12 17 0.0063 0.39 11.1 0.4 2 23 777 799 776 799 0.92

13 17 0.0025 0.15 12.4 0.2 2 23 803 825 802 825 0.96

14 17 1.4e-05 0.00084 19.5 2.2 1 23 831 853 831 853 0.98

15 17 0.016 1 9.8 1.4 1 23 857 880 857 880 0.93

16 17 0.00015 0.009 16.3 1.6 1 23 886 909 886 909 0.97

17 17 0.0043 0.26 11.7 0.3 1 23 913 941 913 941 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.2	74	4.0	5.3	2	23	358	380	357	380	0.96
2	17	7.1	4.4e+02	1.5	0.0	1	23	387	412	387	412	0.88
3	17	0.019	1.2	9.6	1.8	2	23	423	444	423	444	0.93
4	17	5.6	3.4e+02	1.9	3.0	2	17	455	470	454	481	0.75
5	17	0.026	1.6	9.2	0.3	3	23	514	534	512	534	0.95
6	17	0.0014	0.087	13.2	0.2	1	23	542	565	542	565	0.98
7	17	3.5e-05	0.0021	18.2	0.2	2	23	570	591	569	591	0.97
8	17	0.00024	0.015	15.6	0.3	1	22	639	660	639	663	0.91
9	17	0.057	3.5	8.1	2.8	3	21	670	688	670	689	0.93
10	17	0.013	0.82	10.1	0.6	1	23	708	733	708	733	0.96
11	17	0.012	0.74	10.2	1.4	2	23	749	771	748	771	0.93
12	17	0.0063	0.39	11.1	0.4	2	23	777	799	776	799	0.92
13	17	0.0025	0.15	12.4	0.2	2	23	803	825	802	825	0.96
14	17	1.4e-05	0.00084	19.5	2.2	1	23	831	853	831	853	0.98
15	17	0.016	1	9.8	1.4	1	23	857	880	857	880	0.93
16	17	0.00015	0.009	16.3	1.6	1	23	886	909	886	909	0.97
17	17	0.0043	0.26	11.7	0.3	1	23	913	941	913	941	0.89

Sequence Information

Coding Sequence: ATGTCggaaaatgtaaaaactgACGAAAATGTGCCTAGCTGCCTGCATTGCAGAGTATACAAttcgaaacaaaaatatcatgAGATATTCGACGAAGTCGGCATCGAAATAGAGCTGGCCAAACTGCTCGACAGGTATTTCGAGATAAAAGTTGAGCCCGCCGGGCACAAACGGAAGCAACTGCTCTGCGAGGAGTGCGTTAATACGCTGATTCGTTTCTTTGACATCGACGAGCTGCAAAGGGAGCAAGATGCTGCAAATGGTGCAAATAAAAAGCCCAGTAATGATACAAAGTCTTCGGATCCCAAAAAGGATGAGAGTCCTGAGAAAACCCAGACAGCTGCCGGCAAAAATGCCCAAGATTCACCAAACACCTCGGCGAATGGAGCCACAAAGCAAGAGAAGCCAGGGGCGGCGGCTACTGCTGCGATTGCTACGACTGCTACTGCTCCTGATGATACTAAGAAAGGAGCGCCTGAAGCTGTCGGCATACGCATCACCAGAGCCAGGAACGCTCCGCCAAAAAGATTGCCCATAAATCTGAAGAAAGCAGTCAAGCGAAGTGGAACACTTAATGGCAAAGCAGACGTCAAACGGACTCGGTCCAGCGAAGCTGCACAAGGATCAGGCGATCAGGAGCAGATTAGCGCACTCATACGTGACATTCTAGCGGATGAGGAGTCGCCAGCGGATGAAAAATTGGTagaagcagctgccacagtcCGTCAGCTGGAGAAACAATCAGCCGAAGAGCAACGGCAGCTGGAGGAGGCGGTGGAAGAGGAACAAGCGGTGCTCGAGGACCAGGACAATAATGATGAGCTGGAGTTTCTGGTTGAGCGTGAAGACAGCTCCTCGGAATTGAGCGTGCGCCATTTCAAATTGGAGCGAAAAATGAAACGCGTCTCGTCGCAGTCACAAAATGAGAGCCAAAGCGACGATGAAGCATTCAAAGTGGAGCCCTTTAATTTTGTGCTGATCAAGGAATCTGATAATATTGGCGATCTGTACGAGTATTTGGGAACCGTGGTGAAGACCTGTTTTGAGACTTTGATCTTTGACTGGGACACTGTGTGCCGCCACTGCTCGCTGAAGTGCAGCAAATATGAAAGCTTATTCGGTCACATGCTGAAGCGTCACAAGGAGCCGGACGATATTTACAAGTGCCCGATTGCTGACTGCTCGGCCGAGCTGCAGGGAGCCAAATCCTTGGCCATGCACCTGGTTGTGCTGCATGCGCCGGTAGCCGATATATCCATTTATGGCAGTTGTCCCGAATGCAACATGACCTTCTCAAACATATTGCAGTACAATAAGCACTCCTGCGCGCATGTCATCAAAAAGCGACGCGGCATACGCCTGTATTGTGAGATGTGCGGCTTGGAGTTCCCCTCCTGGAAGCGCTTTAATTTTCacaatcaatttcatttggaGCGTCACAGGCCGCGCGCCTGTTTTGTGTGCAGCTACGCGGACACCAACATCGATGAGCTGTTCCATCATTTGCACTACGCTCACGAGCCAGAGGGCACGCTCTTCTGCGACCTCTGTGATCGCAATTTTCGGGATCCGGCCGTCTTTTTGGAGCACAACAAATCACACTCGAATGTCAGCAGCACCACCTACAGCTGCACCGAATGCAGCGCCAATTTTGAGTCACGTGGTCGTCTCAATGGTCACCTGCGCACCGCACATGGCAGCGTCATCAGCTGCGAAATGTGCGGCCGCGAGTTTGCCACGGAGGCCACATACAACCTGCACATGAAAACGCATCTGATTATTGAGCGCGAGGTGCATGCGTGCAACAATTGTGGTCTGCTGAGTGAAAATAATGACAGGATGCTGGCTCATGTGGCGGAAGAGGATTCGGTTTGCTTTGGCATGGATGTGGTAGTGGAACTGATGCGTGATGCTTATGTCTGTGAGTATTGCTCCGCCTACTTTAAACAGAAGAGTGATTTAAGCGCCCATCGCGAATCGGGTGTGCACAAGGATGGCCACTTCTGGTGTCATCCGTGCGGCAAGAAGTTTACCGATATGAAGCTCTATCGTCACCATTTGCGCAACTATCAACAATTGCGCACAGATTTTTCGCATCGCCGTCTAGAAATTTGTCTCTACTATATGTGCGATTATGAGAATTGCAGTGAGGCCTATATTAATTGGAATTcgctatacacacacaagcggcGCACACACGATGCCGTCGAGAAGCAGGAGCCCAAGACGAAGGATAATGAATGGATCTGTCAATTCTGTCAGAAAGTGTGCCGCTCCAAAATGTCGCTCTCGGTTCACGTGGCGCGCAGTCACAACAACAATAATGTGGTCTGCTCGCTCTGCAAGGCTTCGTATAAGGACGAGGAGGCGCTAAAGAAGCATCACGCCTATTGGCATGAGCGCATCGAGTGTCCGATGTGCTTGAAGGTGGTGAAGAATCGTCGCAACTTCGACACCCACATCAAGGTGGTGCACTCAAACAATAAGCGTTACTCGTGCAGTGAATGCCAAAAAGGTTTCTATCACAAGAGCGAAATGGAGGCGCATCAGCGGCTGCATTCCCAATCGTTCAAATGCGAACAGTGCAACTTCACCACGAGGAACAAGAAATCGATGTCGGTTCATGTGCTGGGCCAGCACTACAAGCGTTTTGCCTTCAAGTGTAAGTTCTGTGAGAAGCGCTTTGGACGCCGCCAGGGACTATCAAATCATATTCTACGTGTGCATGGCTCCAAATATACATGCCGTGACTTCTTCGATGGCGGTTGCGGCAAATCATTTGGCTCGACGACACGCCTCAATGTGCATGTGCGAAAGGCGCATAACAGCAGCCTCTTTCTGACCGATGACCCAGCCAAATCGGAGGAAAACGAAGacgaggaggtggaggaggaggaggagcctGCTATGGTGGATTCGGCAAGCGAAGGTCCGTCCACATCGAAGAAGCGTTTAATTCGCATCAATGCGAACACTGAGATTGAATTCATTGGCGATACAGCTGAGgccgacgacgacaacgagaGTCTCACTGATTCGGAAATCTTCGAAGAGCTTCAGGAgatcaaagcagcagcagagcagccaccaaaaaagaaaccaaagcCAATGACAACGCGAGCTTGA
Protein Sequence: MSENVKTDENVPSCLHCRVYNSKQKYHEIFDEVGIEIELAKLLDRYFEIKVEPAGHKRKQLLCEECVNTLIRFFDIDELQREQDAANGANKKPSNDTKSSDPKKDESPEKTQTAAGKNAQDSPNTSANGATKQEKPGAAATAAIATTATAPDDTKKGAPEAVGIRITRARNAPPKRLPINLKKAVKRSGTLNGKADVKRTRSSEAAQGSGDQEQISALIRDILADEESPADEKLVEAAATVRQLEKQSAEEQRQLEEAVEEEQAVLEDQDNNDELEFLVEREDSSSELSVRHFKLERKMKRVSSQSQNESQSDDEAFKVEPFNFVLIKESDNIGDLYEYLGTVVKTCFETLIFDWDTVCRHCSLKCSKYESLFGHMLKRHKEPDDIYKCPIADCSAELQGAKSLAMHLVVLHAPVADISIYGSCPECNMTFSNILQYNKHSCAHVIKKRRGIRLYCEMCGLEFPSWKRFNFHNQFHLERHRPRACFVCSYADTNIDELFHHLHYAHEPEGTLFCDLCDRNFRDPAVFLEHNKSHSNVSSTTYSCTECSANFESRGRLNGHLRTAHGSVISCEMCGREFATEATYNLHMKTHLIIEREVHACNNCGLLSENNDRMLAHVAEEDSVCFGMDVVVELMRDAYVCEYCSAYFKQKSDLSAHRESGVHKDGHFWCHPCGKKFTDMKLYRHHLRNYQQLRTDFSHRRLEICLYYMCDYENCSEAYINWNSLYTHKRRTHDAVEKQEPKTKDNEWICQFCQKVCRSKMSLSVHVARSHNNNNVVCSLCKASYKDEEALKKHHAYWHERIECPMCLKVVKNRRNFDTHIKVVHSNNKRYSCSECQKGFYHKSEMEAHQRLHSQSFKCEQCNFTTRNKKSMSVHVLGQHYKRFAFKCKFCEKRFGRRQGLSNHILRVHGSKYTCRDFFDGGCGKSFGSTTRLNVHVRKAHNSSLFLTDDPAKSEENEDEEVEEEEEPAMVDSASEGPSTSKKRLIRINANTEIEFIGDTAEADDDNESLTDSEIFEELQEIKAAAEQPPKKKPKPMTTRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00496807;
90% Identity: iTF_00501963;
80% Identity: -