Basic Information

Insect: Drosophila bakoue
Gene Symbol: -
Assembly: GCA_008044335.1
Location: VNJL01010747.1:14222-17898[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.092 11 7.3 6.1 2 23 342 364 341 364 0.95

2 18 0.36 43 5.5 0.1 1 23 371 396 371 396 0.92

3 18 0.032 3.8 8.8 2.2 2 23 407 428 407 428 0.93

4 18 0.024 2.9 9.1 0.1 2 23 468 490 468 490 0.95

5 18 0.0049 0.58 11.3 0.6 3 23 498 518 496 518 0.95

6 18 0.0036 0.44 11.7 0.3 1 23 526 549 526 549 0.98

7 18 0.0057 0.68 11.1 0.3 2 23 554 575 553 575 0.97

8 18 7.1 8.5e+02 1.4 0.1 1 7 583 589 583 601 0.92

9 18 0.00023 0.028 15.5 0.8 1 22 623 644 623 647 0.91

10 18 0.21 25 6.2 1.3 3 21 654 672 654 673 0.90

11 18 0.04 4.8 8.5 0.3 1 23 692 717 692 717 0.95

12 18 0.046 5.5 8.3 1.5 2 23 735 757 734 757 0.93

13 18 0.0056 0.67 11.1 0.3 2 23 763 785 762 785 0.92

14 18 0.017 2 9.7 0.2 2 23 789 811 788 811 0.95

15 18 3.1e-05 0.0037 18.3 0.6 1 23 817 839 817 839 0.97

16 18 0.008 0.96 10.7 0.9 1 23 843 866 843 866 0.93

17 18 1.1e-05 0.0014 19.6 1.1 1 23 872 895 872 895 0.97

18 18 9.2e-06 0.0011 19.9 0.5 1 23 900 928 900 928 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.092	11	7.3	6.1	2	23	342	364	341	364	0.95
2	18	0.36	43	5.5	0.1	1	23	371	396	371	396	0.92
3	18	0.032	3.8	8.8	2.2	2	23	407	428	407	428	0.93
4	18	0.024	2.9	9.1	0.1	2	23	468	490	468	490	0.95
5	18	0.0049	0.58	11.3	0.6	3	23	498	518	496	518	0.95
6	18	0.0036	0.44	11.7	0.3	1	23	526	549	526	549	0.98
7	18	0.0057	0.68	11.1	0.3	2	23	554	575	553	575	0.97
8	18	7.1	8.5e+02	1.4	0.1	1	7	583	589	583	601	0.92
9	18	0.00023	0.028	15.5	0.8	1	22	623	644	623	647	0.91
10	18	0.21	25	6.2	1.3	3	21	654	672	654	673	0.90
11	18	0.04	4.8	8.5	0.3	1	23	692	717	692	717	0.95
12	18	0.046	5.5	8.3	1.5	2	23	735	757	734	757	0.93
13	18	0.0056	0.67	11.1	0.3	2	23	763	785	762	785	0.92
14	18	0.017	2	9.7	0.2	2	23	789	811	788	811	0.95
15	18	3.1e-05	0.0037	18.3	0.6	1	23	817	839	817	839	0.97
16	18	0.008	0.96	10.7	0.9	1	23	843	866	843	866	0.93
17	18	1.1e-05	0.0014	19.6	1.1	1	23	872	895	872	895	0.97
18	18	9.2e-06	0.0011	19.9	0.5	1	23	900	928	900	928	0.94

Sequence Information

Coding Sequence: ATGTCggaaaaccagaaaaacaATAGCTGCCTGCATTGTAGTGTTTTCAATACGAAATACCAGTACCAGGAGATCTTCGATGAGTTCGGCAAGGAGCTGGGCCTGCAGtcgctgctggccaagcacTTCCAGCTGGCTGTGGCGCCCGAACCGCGCCAAAGGCAGCTCCTGTGCGAGGTGTGCGTCAACATGCTCATCCGGCTGTTCGATATCGACGAATTGCAGCGCCAACAGGATGCGGCGAAGGCTAGGACCGAGGACTCAAGCCCTGAGACGTCCCAAGAAACCGTTCAACCTGTCTCCCCGGTTTCAGTCAAGCCTCACGCTAAACCTGCACCCGCTGAAGCCGCAGGCAATAAGGAGAAGATTACAAAGCCCGTAGCGGCTGTTCCTTCTCCTCCTACTCCCACCAGGGAACCGAGTGGCCGGATTAGCAAGAGAGTTCCGCCACCTCAGCTATTGCCTGCTCCATCCAAACCTTCTGGGCGAGCCAAGGAGTCTGTAAAACCCGCCAAGGAAACAGCACTCGCCAAGGAAGCATCGCCCGCCAAGCCAAAGGACGCTGAACAGGAGCACATTAGTGTCCTCATACAAAACCTCCTCGACGAAGATGAGGCCATGTGCCAGGAAGTGGCAGACGAAGCTGAACTTATATGTGAGGAAGTAGAAGCAATCGAGGCTGCTCCCATGCCCGAAGAGCCGCACACCCAAAGGAAAATGGTCCTGTTGAACAAGAAAGCCGCGCGCCAGCCTAGTCTAGatgaagatatatatatatacgagcAAGAGGatattttggAGCCAGCTGTGAAGAAGATAAAGGTCGAATCCAAGGGTCGATCATCAGCTAAGGTAACAGTTCAAGCGGAGGAGAGTCAGAGTGAGGGAGAAACTGAGGAAAGCCACGTGATTCTCTTCGATTTTGTTATGATCAAAGAAAAAGATGAAATTGGCGACATTGCTGATTACTTGTCCAAGGTGGTGAAGACCAGCTTCGAGAAGCTGACCTTTGCATGGCCCACGGTGTGCAAACACTGTTTCCACAAGTTCACCACCTTCGAGAGTCTTCTGAGTCATACGCTCAAGTCGCACAAATCTCGGGGTAATGCCTACAAGTGTCCCATCGAAGGCTGCAACAAGGAATTGAAGGGCACCAAATTTCTGGCTATGCATCTGGTGGTTTTGCACGCACCCGTAGCCGAaatACCCATTTATGGCAGCTGTCCGGAGTGCAAGATGACCTTTTCCAACATCTTGCAGTATAACAAACACTCTTGCGCTCATATGATCAAAAAGAAGCGCGGTGTCCGCCTGTTTTGTGAAATGTGTGCACAGGACTTTCCCTCCTGGAAGCGtttcaattttcACAATCAGTTTCATCTAGAGAAACATAGGCCTCGCGTCTGCTTTGTCTGTGATTATGCCAGCACCAACATAGATGATCTTTTCCAGCATTTAAACTACTCGCATGAGCCGGCGGGGACCTTGTTTTGCGACCTcTGCGATCGAACTTTCCGGGATTCTGCTGTTTTCATGGAGCACAACAAGTCGCATGCCCATGTAAGTGATAATACGTACACCTGTAGCGAATGCATGTTGGTATTTGAGTCACGCGGTCGCCTAACTGGACACATGCGCTCCATGCATGGCAGCATCATTAGCTGTGAGCTCTGTTCTCGCGAGTTCGGCAGCGAGGCCACCTACAGCATTCACATGAAGAAGCATCTGATTATCGAGCGGGATCTGTACGTTTGCCACAATTGTGGCCTGCTGAACGACAGCCAAGATAAAATGGCTGAACATGCTGAGACCAAGAATTCACCCTGCTTTGGAGCCAAGATATATATGGAGATGCTCCGCGATGCCTATGTCTGCGAATACTGCACCTCGTACTTCAAGCAAAAGTCCGATCTGCAGGCACATCGTACGTCGGGAATCCATAAGAACGGACTGTTTTGGTGCCAGCCGTGTGGCAAGGGTTTTCCGCACATGAAACTGTACCGCCATCACCTGCGAAACTTTCAGAAACTGCGCACGGATTCGGCGCATCGGAAGCTGGAGATTTGTGTTTTCTACATGTGCGATCAGCCGAACTGCTTGGAGGCCTATGTGAACTGGAACTCATTGTACACGCATAAGCGGCGCACCCACGAATCGTCGGACAAGGAGACGGATAAGGCCTCAAAGTCCGGTCAGGATTGGATTTGCCAGTTCTGTTCAAAGGAGTGCCGCTCGAAGATGTCCTTGTCTGTTCATGTGGCAAGGAGCCATAATAATGACAACGTCGTCTGTTCGTTGTGCAATGCCTCGTACAAGAGCCAGGATGCATTGGACAAGCACCATGCCTACTGGCACGAGCCCATCGAGTGCCCTCAGTGCTTTAAGATCGTTAAAAATCGTCGAAACTATGACACTCATGTTAATGTCGTGCATTCCAACAAGAAACGCTATGCGTGCGGTGTTTGCGAGAAGGGATTCTATCATAAAAGCGAAATGGAGGCTCATCAAAGGCTCCATGACCAGTTGTACAGCTGCGAACAGTGCAGCTTTACGACGAGGAACAAGAAGTCTCTGTCCGTTCATGTCCTGGGCCAGCACTACGAGCGTTTCGCCTTCGAGTGCAAGGTGTGCAACAAGAAATTCGGACGTCGCCAGGGCCTGACTACGCACATTCAGCGGGTTCATGGCGGCTCCAAGTACATGTGCCATGATTACTTCGAGGGCGGCTGTGGGCGCACCTTTGCCAGCAGTTCCCAGTTGAATGTACACGTGAGAAAGGTGCACAAGGGCTCTATTTTTCTGcatgaggaggaagaagagtACAGCGACGGACCATCCACATCCAAGAAGCGCTGCTACCGCATCGACAACGATAGCAATATTGAGTTTGTAGAAATTGGAGACGGCGGGGATGAGGAGGATGAGGTGGAGGAATTTATTAGCGAGGCCCTGTCTGTTACTAAGCACTGA
Protein Sequence: MSENQKNNSCLHCSVFNTKYQYQEIFDEFGKELGLQSLLAKHFQLAVAPEPRQRQLLCEVCVNMLIRLFDIDELQRQQDAAKARTEDSSPETSQETVQPVSPVSVKPHAKPAPAEAAGNKEKITKPVAAVPSPPTPTREPSGRISKRVPPPQLLPAPSKPSGRAKESVKPAKETALAKEASPAKPKDAEQEHISVLIQNLLDEDEAMCQEVADEAELICEEVEAIEAAPMPEEPHTQRKMVLLNKKAARQPSLDEDIYIYEQEDILEPAVKKIKVESKGRSSAKVTVQAEESQSEGETEESHVILFDFVMIKEKDEIGDIADYLSKVVKTSFEKLTFAWPTVCKHCFHKFTTFESLLSHTLKSHKSRGNAYKCPIEGCNKELKGTKFLAMHLVVLHAPVAEIPIYGSCPECKMTFSNILQYNKHSCAHMIKKKRGVRLFCEMCAQDFPSWKRFNFHNQFHLEKHRPRVCFVCDYASTNIDDLFQHLNYSHEPAGTLFCDLCDRTFRDSAVFMEHNKSHAHVSDNTYTCSECMLVFESRGRLTGHMRSMHGSIISCELCSREFGSEATYSIHMKKHLIIERDLYVCHNCGLLNDSQDKMAEHAETKNSPCFGAKIYMEMLRDAYVCEYCTSYFKQKSDLQAHRTSGIHKNGLFWCQPCGKGFPHMKLYRHHLRNFQKLRTDSAHRKLEICVFYMCDQPNCLEAYVNWNSLYTHKRRTHESSDKETDKASKSGQDWICQFCSKECRSKMSLSVHVARSHNNDNVVCSLCNASYKSQDALDKHHAYWHEPIECPQCFKIVKNRRNYDTHVNVVHSNKKRYACGVCEKGFYHKSEMEAHQRLHDQLYSCEQCSFTTRNKKSLSVHVLGQHYERFAFECKVCNKKFGRRQGLTTHIQRVHGGSKYMCHDYFEGGCGRTFASSSQLNVHVRKVHKGSIFLHEEEEEYSDGPSTSKKRCYRIDNDSNIEFVEIGDGGDEEDEVEEFISEALSVTKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00593985;
90% Identity: iTF_00613634;
80% Identity: -