Dazt008956.1
Basic Information
- Insect
- Drosophila azteca
- Gene Symbol
- -
- Assembly
- GCA_005876895.1
- Location
- VCKU01000003.1:3380238-3385444[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0014 0.11 12.9 1.1 1 23 215 237 215 237 0.96 2 21 0.0062 0.51 10.8 1.1 1 23 243 265 243 265 0.97 3 21 0.034 2.8 8.5 2.1 2 23 297 318 296 318 0.97 4 21 0.0018 0.15 12.5 2.8 1 23 391 414 391 414 0.94 5 21 2.3 1.9e+02 2.7 1.3 2 22 422 442 421 442 0.95 6 21 0.38 31 5.2 1.5 1 23 451 473 451 473 0.97 7 21 0.12 9.6 6.8 0.2 3 23 485 505 483 505 0.96 8 21 0.012 0.94 10.0 0.8 1 23 587 610 587 610 0.97 9 21 0.0028 0.23 11.9 0.2 2 22 620 640 617 640 0.90 10 21 0.00082 0.067 13.6 1.6 2 23 698 719 697 719 0.97 11 21 6.5e-06 0.00053 20.2 2.5 1 23 727 749 727 749 0.99 12 21 0.0031 0.26 11.8 1.9 1 23 901 923 901 924 0.95 13 21 0.0074 0.6 10.6 0.5 2 22 932 952 931 952 0.95 14 21 0.019 1.6 9.3 0.7 1 23 961 984 961 984 0.90 15 21 1.9e-05 0.0016 18.7 3.2 1 23 1006 1028 1006 1028 0.98 16 21 0.0001 0.0084 16.4 1.2 1 23 1035 1057 1035 1057 0.98 17 21 0.0064 0.52 10.8 0.0 2 21 1084 1103 1083 1104 0.93 18 21 0.0087 0.71 10.4 3.9 1 23 1150 1173 1150 1173 0.96 19 21 0.0049 0.4 11.1 0.5 1 23 1210 1233 1210 1233 0.96 20 21 0.00021 0.017 15.4 1.5 1 23 1257 1280 1257 1280 0.97 21 21 0.016 1.3 9.5 0.1 3 21 1283 1301 1282 1305 0.89
Sequence Information
- Coding Sequence
- ATGCTGCCCAGCAATATTTGCCGTACGTGTGCCCTGCAGAACAGCAATTTGCTGCCCCTGTCCACGTCCTTGGACAAGTACACGAACAAAAGTTTCTATGATGTGCTCCAAGAACTGACTCAGATCGATCCCCTGCTGGAGAATGCGGACGACAATCTGCCCCAGCATCTGTGCACAGATTGCTTGGACAGGCTGGAGAACGCCTACGCCTTTGTGGAGCAGGCAAGAAAAGTCAATGGAGAGCTGTTGGTGCGGCTGCGGGAATGTCTGGAGGAGAGTCCCATTGACATACCACAGCAGCAGATCAAAACGGAGATTGACATTGATGAGGAGCAAAGAGATTTCACAGATTCAGGCGAGGCACAAAGATCGTCTGATGTGGATGTGGACTCGGCTGGCGTGTGTTCCGTTGAGCTGAAATGGACTCCAGAAAGTGCCAGCGAGGAGGAAAATGCCGCCGATGCGCTCTCAAACGATGAAGATGATGATGCGCAGCCCTATATCTTGCGGCGAAGTCCCCGCAAAGTCAAGCAACAGGCAGACAGTGAAGAGGAGGAAGGAGTCAGTCCTTCACCCATCAAGCAGCGTCGTGGCCGTCCTCCTGGTCTGGCCAAAAGCCAGTCAAGGAATTCCGAAGGCCGTCATGCATGTGAGGTGTGTGGCAAAACGTTTTCCTGGTTCCGGGACATGAAGCGACATGCTCGCGTTCATTACGAGAAGGCCTCGTTCGTCTGCGATATTTGTGGCAAGGGATTCCTGCGCAAGGACAAGTACACCTTCCATCTGCGCTCCCACGAGAAGCGGGAGGCCAAGTATCAGGCCCTCCAGCTGAAGAACGAGTGGAGGTTCGCTGAGCGTTTATACAGCTCCGGCCGACTGAAGAAAATGCAGTGCAAATTGTGCGGCTTGAAATGCCAGCGAATGCAAGAGCTCCGATCCCATTTAGCGAGTCACGACCACACGGACAGTTTGTTCAGTCTGCGAGCGGACAATGATGTGGTCAAAGAACATTTTTCCACTGGCCCATGTGACCTGGAAAAGATCAAGCAACAAATTTGCTCGGAAATATCCGAAGGGCAGCTGGAAAAATACTCATCAGTGGTCAATTTCCATGGCTACGAACTGTGCCTGAGCGATTCTGACGATGAGCCTGCCGGGGGAGACCCACCATACCATTGTGACCTATGCAATCTGTCGTACACACGCAAATATCGCCTGATGCGGCACACCCTGGAGGAGCACACCCAATCGCCCATTTCCCAGCGCTGCAACCTCTGCAAAGTGGGTTTTGTGTGTGCAAAGCTCTTCGAACAGCACCAGCGGACCCAGTGCCAGAGCAAAGGGAAGCGCTATCGTTGCCGCAAGTGTCCGGGAAAGTTCATGTGGCTGGAGAATCTGGAGCGGCATGCCTGCTCCCATCGCAAGGAGGAGCAGTCATATAGGCAAATCATCTGTTGCCTGTGCGATGCCCAGCTTCCCAGCTTAAGGCAGCTGCGCGCTCACCTGGCCACCCATCGACATGGATTGAGTGGCATTGATCCGGATCAGAAATCTGCCTTCTTCCGTTCTTACTATCCCAACGGATTGGGCTGCAGCCTCTCCGAGCTGAGCTCCCGCATAGCTGGGGACTATGAGGCCCAAGACTTTGGACGCTACTACAACGCCTGCACGGGAAGTGGTCAAGAGCTGGATCTCTTTGACTCTGACACGGAGGAGACAGACGATGCAGACAAACCAGGGGAAAAGCCGAAACCCTCGCACACCTGCCTGCTCTGTGGAGAGACTACTATTCGTCTGCTCAAGCTACTGCAACATCAGAGGATACTCCATTCCGACAAGGGCACCACGTACCCCTGCTCTTGCCAGGATTGTGGCGCTGGCTTCGTTTCAGAGCCCTTGCTTCAGCAACATCGAAGACGTTCCTGTGCCAAAAAGCACTCGAAACACCACTGCCAGCGATGTAATCTTCATTTTGTGTGGCAATCGAACCACGAGCAACATCTGCGATTGTATCACGACAAAGATGCAGATCAGGAGCAGTCGGAGGACTGCCAGCAGGGTGGAAAACATAAATCTCCGGCCGCCAAGCTTCAGTGCGATGAATGTGAAAAGGTCTTCATTTGGCACAAGGATCTCACCCGTCACAAGCGAATGCATCGCCCACCATCGGCAGCCCAATACGAGTGCGCCTATTGCGACCGCAAGTTTCACCGCAAGGATGGCCTCAAGTCCCACCTGCGGGTGCACAACGAGCAGCAGGAGACAGTGAATGGGGAGCAGTCTTGCGTCCAATCGACCTCTACGAACAGTATTCAGAGAATGCCCGGGGAGCAGTTTACCCTACTATGCCGTCCAAATGGCTGCAAGCAAATCCAGTGCATGATTTGCCTATCGCGTCATTCGAAGATCGCCGATTTGAGGAACCACCTAAGCACGCACCAATATGGTGTGTGCTTTACACAGGAGAGGGATATTCCCAGTGCCTCGCGCTCGTTGTATCCGGAACTTGGCACTGTCCTGGATAAGCAGGAGCTGGAAAAGAGGATCATGAGCGATGTGACCGGCGGTTTGGAGTTGGAGCGATTCATTTCCATAACCAACGAGGCTGGCATTGAGCTCTCTCTTCAGAGCAGTGAAACGGAAACGGATTCAGAGCAGGACGAGGATGACGAGAGTTCCGAGGAAGCTGACCAGCAGCGGTATGCCTGCAACATCTGCCAGGTGGAGGTGAGGCGAAAGCATCAATTGTATGCCCACCAGTTGGAGCATCACCAGTGGGAGGAGGCTTCGCTTGTGTGTGCCCACTGTCAAGCGAGATTCGTGAGTGAAACGCTGCTGGAGCATCACTACAGAACACTCTGTCGGAACCCACAGAAGCGTTTCCAGTGCCGAAAGTGTCCGCTACGCTTCCGCTGGCGGGATAACCTGAAGCTGCACGCAAGTGCCTCCCATCAGCAAATAGGACAGTCCCAAGCTGCAGAGGAACAGAGGAACGGCATCCAGACTGAGTTCGACCACCAGTGTGGGGAGTGCAATCGCAGCTTCAAGATGCAGAAGGATCTCACGCGGCATACGCTGATGCATGCCCAGGAATCGAGCATATATCGTTGTCGTTGGTGTGCCCGCCGCTTCTACAGGAAGGCCAATCTCCTGCAACACATTGAGCGGCATGGCATCGGAGCTAGTCAGCTGCCCTACGCGGAAGCTCTCCTCAATGCCTATGGCCAACCCAATGGCCAGAAGAGCGTGGAGTGTAAGGTGTGCAGCTTGAGCTTCTCCAGTATCGCTGCACTTCGCGTCCATCTAGAGACCATGGCGTCAGGCAGTCACCACGAACTATCCTCCCTGCAGAACTATTCGATAACCAATCAAATGGGATTCGAGTTGCACTTGGACGACTCGGAGACGGATATGGAGGAGTCCAAGCCACCGGGCACGCCTGCTGTCTACACCTGCGGCATGTGCCAGCTCAGGTGCGTGCGAAAGTATGAGCTGCATCAGCACCAGCAGGCCATGCATAGGCTGGAGAAGATCCCCGATGGCTGCGATCTGTGCATATTCAAGAGTGTCTCTCCCGATCTTATCGCGCATCACAAGCGAGTGCAGTGCCACAACCGGGAGAAGCAGTTCACCTGTGCCAAATGCGGCTACAAGTTCATGTGGGAGTCCAATCTGCTGCTGCACATGCAGCTGCAACATGGCAAGACCGAAGAGCAGGATGATCCACCCCTGGATGATCCCGTGGAGCAGAAGGCTGTGTGTCCAGTCTTTCAGTGCGGCCTCTGCCCAAGGAAATACAATCGCAAGGATCGGCTAACGGCCCATGTGAAGAAGTTCCACAACCCATGCGGGGTCTGTGGCGAGCGTTTCATCCAGGGCACGGCCCTGAAGAATCATCGCCTACAGCAGGGCCACTATGACGAGGCCAGCCAAGGAGCGGCAGATTCCTCAAGGCGCACGGTCCTAGAGCAATTTACAGTTTAG
- Protein Sequence
- MLPSNICRTCALQNSNLLPLSTSLDKYTNKSFYDVLQELTQIDPLLENADDNLPQHLCTDCLDRLENAYAFVEQARKVNGELLVRLRECLEESPIDIPQQQIKTEIDIDEEQRDFTDSGEAQRSSDVDVDSAGVCSVELKWTPESASEEENAADALSNDEDDDAQPYILRRSPRKVKQQADSEEEEGVSPSPIKQRRGRPPGLAKSQSRNSEGRHACEVCGKTFSWFRDMKRHARVHYEKASFVCDICGKGFLRKDKYTFHLRSHEKREAKYQALQLKNEWRFAERLYSSGRLKKMQCKLCGLKCQRMQELRSHLASHDHTDSLFSLRADNDVVKEHFSTGPCDLEKIKQQICSEISEGQLEKYSSVVNFHGYELCLSDSDDEPAGGDPPYHCDLCNLSYTRKYRLMRHTLEEHTQSPISQRCNLCKVGFVCAKLFEQHQRTQCQSKGKRYRCRKCPGKFMWLENLERHACSHRKEEQSYRQIICCLCDAQLPSLRQLRAHLATHRHGLSGIDPDQKSAFFRSYYPNGLGCSLSELSSRIAGDYEAQDFGRYYNACTGSGQELDLFDSDTEETDDADKPGEKPKPSHTCLLCGETTIRLLKLLQHQRILHSDKGTTYPCSCQDCGAGFVSEPLLQQHRRRSCAKKHSKHHCQRCNLHFVWQSNHEQHLRLYHDKDADQEQSEDCQQGGKHKSPAAKLQCDECEKVFIWHKDLTRHKRMHRPPSAAQYECAYCDRKFHRKDGLKSHLRVHNEQQETVNGEQSCVQSTSTNSIQRMPGEQFTLLCRPNGCKQIQCMICLSRHSKIADLRNHLSTHQYGVCFTQERDIPSASRSLYPELGTVLDKQELEKRIMSDVTGGLELERFISITNEAGIELSLQSSETETDSEQDEDDESSEEADQQRYACNICQVEVRRKHQLYAHQLEHHQWEEASLVCAHCQARFVSETLLEHHYRTLCRNPQKRFQCRKCPLRFRWRDNLKLHASASHQQIGQSQAAEEQRNGIQTEFDHQCGECNRSFKMQKDLTRHTLMHAQESSIYRCRWCARRFYRKANLLQHIERHGIGASQLPYAEALLNAYGQPNGQKSVECKVCSLSFSSIAALRVHLETMASGSHHELSSLQNYSITNQMGFELHLDDSETDMEESKPPGTPAVYTCGMCQLRCVRKYELHQHQQAMHRLEKIPDGCDLCIFKSVSPDLIAHHKRVQCHNREKQFTCAKCGYKFMWESNLLLHMQLQHGKTEEQDDPPLDDPVEQKAVCPVFQCGLCPRKYNRKDRLTAHVKKFHNPCGVCGERFIQGTALKNHRLQQGHYDEASQGAADSSRRTVLEQFTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00580900;
- 90% Identity
- iTF_00580900;
- 80% Identity
- -