Dazt008098.1
Basic Information
- Insect
- Drosophila azteca
- Gene Symbol
- bab1
- Assembly
- GCA_005876895.1
- Location
- VCKU01000016.1:2969370-2971000[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7e-18 1.5e-14 53.3 0.0 1 43 56 99 56 101 0.95 2 3 5.3 1.1e+04 -3.9 0.9 6 13 220 227 218 229 0.83 3 3 4.1 8.5e+03 -3.5 0.1 4 11 235 242 235 242 0.84
Sequence Information
- Coding Sequence
- ATGATGGAGAATTCGCAAGCCTGGATGGGGGCCACCGCTGGCTCCACGCTGGCAGCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAGTGCTGGAACACCAATCAGAATCTGATGCATCACATGCGCTTCCGGGAGCGTGGACCGCTCAAGTCGTGGCGCCCCGAAACGATGGCCGAGGCCATTTTCAGTGTCCTCAAGGAGGGACTTTCGCTGTCGCAGGCGGCCCGCAAGTACGACATTCCCTATCCCACATTCGTTCTGTATGCGAATCGAGTGCACAACATGCTGGGACCCTCCATCGATGGGGGACCCGATCTGCGGCCCAAGGGCCGTGGGCGGCCCCAGCGCATCCTCTTGGGCATATGGCCGGATGAGCATATCAAGGGGGTGATCAAGACGGTGGTTTTTCGCGATGCCAAGGACATGAAGGACGACAGCCTAGGCGGCCACATGCCGCCCTACGGTCGTCACTCGGACATGACGCTCAGCTATCCAGGCGCTAGTGGCGGCATTCCAGGGCCAGGAGCCGCTAGCCTCAGCGCTCTGGCCTGTCCCAATGGCATGGGCAGCGGTGGAGGCGGAGTCCCAGGCCCAGGAGGTGGCGTCGGTGTGGGTCCTGGCGTTGATCAGCATATGTCGCAGGAAACAGCAGCCGCCGTCGCCGCCGTGGCGCACAATATAAGACAGCAGATGCAGATGGCCGCCGCCGTGCAGCATCAGCACGGGGAGGCGGGGCCGCCGGTGGTGCCACCGCCCGGGCTGTTCAACCTGCCGCCACATTTGGCGGGTGGGCCAGGGCCGCCCGGCAGCAGGGGCAGCATTTCCCCGGCGCTAAGTAGCGGTTCAGGGCCGCGACACGCTCCCTCACCGTGCGGTCCCGCCGGCCTGTTGCCGAATCTGCCGCCCAGCATGGCCTCCGGTTTCGGTGCCAGTTCCATGGCGGCGGCCAGTGCCGCCTCCACATccgcatcatcatcatcctcctCCCACCAGCATTCGCACTCGCATCCTCAtccgcattcgcattcgcatgGGGAGAAGCCCCAGAAGAAGGGGAGTCCTCACCGCAGCGAAACCCCGCGCCTCCACTCGCCGTTGGGCGATTTGGGGCTCGAGATGTCCAGTTACAAGCGAGAGTTCTCGCCCAGCCGCCTCTTTGCCGACGATCTGGCGGAGTTGGTGGGTGCCAGCGTGTCATCCTCATCATCGGTGACgcaaggagcagcaggaggggGATCTTCGGCGGCCATTGGGGAAGCTCCCCGCTCCAGTTCAAGCGGAGGCATTAAAGTGGAACCCATTACCACCACTAGCGAGTAA
- Protein Sequence
- MMENSQAWMGATAGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDMKDDSLGGHMPPYGRHSDMTLSYPGASGGIPGPGAASLSALACPNGMGSGGGGVPGPGGGVGVGPGVDQHMSQETAAAVAAVAHNIRQQMQMAAAVQHQHGEAGPPVVPPPGLFNLPPHLAGGPGPPGSRGSISPALSSGSGPRHAPSPCGPAGLLPNLPPSMASGFGASSMAAASAASTSASSSSSSHQHSHSHPHPHSHSHGEKPQKKGSPHRSETPRLHSPLGDLGLEMSSYKREFSPSRLFADDLAELVGASVSSSSSVTQGAAGGGSSAAIGEAPRSSSSGGIKVEPITTTSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00580639;
- 90% Identity
- iTF_00480787;
- 80% Identity
- -