Basic Information

Gene Symbol
Rel
Assembly
GCA_005876895.1
Location
VCKU01000003.1:8161519-8164530[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-53 8.3e-50 168.9 0.7 1 168 137 319 137 320 0.95
2 2 2.6 1.1e+04 -3.9 0.0 125 163 576 614 572 616 0.68

Sequence Information

Coding Sequence
ATGAGCCATATCTTTGATTTGGACAAGGGCAAGAACGTTCCGTATATGAACGATTCCTCCAGCACGAGCGGATATAGCAGCGGAAATTCGCCAACATCCACCATGTCGCCAGCACATTCCCCCGAAACCTTGGCCCTGCAAAGTGACTTCGCAAATTTGAACTGTGCAAACTCACCTCAACCGCCGCCAATGCTGAATTCACCATACCAGATGGTAAATGGCAACCTCGACGCCAGCAATTTGACAAATGCCACGAGTTTTGGAAATATAAATATGTTCGTGGATCATCATTACTACGCTCCGCCTCCGAACGCCACGgaaacagcaaaaaactttGGATATAATCGAACCAATGGCGGAGTCGGCGGTGTTGTGGCAAAATCGGAGTTCGGGAACATGCCCGCTTCCCTCCGCATTGTGGAGCAACCTGTGGAAAAGTTCCGATTCCGATACAAGAGCGAAATGCATGGAACACATGGCTCCCTGAACGGTGTCAACTCGAAGCGGACACCGAAGACGTTTCCAGAGGTGACGCTGTGCAATTACGACGGTCCGGCGGTGATACGGTGCAGCCTCTTCCAGACGAACCTCGACAGCCCGCACTCGCATCAGTTGGTGGTGCGGAAGGAGGAGCGGGATGTGTGCGATCCGCACGACCTGCACGTGTCCAAGGACCGTGGCTATGTGGCTCAATTCATCAACATGGGCATCATACACACGGCCAAGAAGTACATTTTCGATGAGCTCTTTAAAAAAAAGCAAGATCGGCTGGTGTTCGAGATGAAGCGTCGCGAGCTGTCCACCAAGGAGGTGCAGAAGCTGCACCAGGAGACAGAGCGCGAGGCCAAGGATATGAATCTGAATCAGGTCCGACTCTGCTTTGAGGCCTACAAGATCGAGGACAATGGCAATTGGGTGCCCATTGCCAACCCCGTTTTCAGTAATGCGATCAACAATCGCAAGTCCGCCCAAACGGGAGAGCTGCGCATCGTGCGGCTTAGCAAACCTACCGGCTCTGTGATGGGCAACGATGAGCTGATCCTACTCGTGGAGAAGGTCAGCAAGAAAAATATCAAGGTGCGCTTCTTTGAGGAGGACGAAGACGGAGAGACTGTGTGGGAGGCGTATGCCAAGTTCCGTGAATCGGATGTCCATCATCAGTATGCCATCGTTTGCCAGACGCCCGCCTACAAGGACAAGGACGTCGACAGGGAGGTGAATGTCTCCATTGAGCTGATACGACCCTCGGACGATGAGCGCTCCTTCCCGCCGCTCCCGTTCCGCTACAAACCGCGCGAAGCCATCGTCTCGCGAAAACGCCGGCGCACCTGTTCGATGGCCACCAACAGCAGTTCGGGCGGCAGTGCCCAGAACTCTGAAGACCTTCCCAAGACACTGGCACTGGCCCAGCCCCAGGGAGTACCTCAGGGACACGAACTGCCCATGGGGGGAGCACCCATGAGCGGAGCGCACCTCATGTACCACGATCAGACCATCAGTCAGGAGTTTGGACGGGACACGGTCCTAAACGACCTGATCTCCTCGGAAGACTTCCGTCAGCTGATCGGAACGAAATCCGGAGAACTCATGCAAATGTGCAGTCTCGACATAGGCTCCCTTGAGACAGACGGCCATGGACGGGCAGCGGAGCGACCGGCTTTCCCAACAGTAGCAACCAACCGGAATTGGACGCCACACTTTTTGAGTGCAATCTTCAAGATCTACGAGGCTCATCGGCGGTCACCAAATGACAGCTCGCGGAAGCAGGTGGAGGAGATGTTTACCGAACACGCCCTGCGGAACGACAACAACGACACGCTGCTCCACGAGGTGATTATCAGCCAGAGGACAGAGGGACAGCTGACGCAGGCCATTCGAACCATTGAGGTGATGAAGTACTTCAAGCTGAACGATCTGGCGAACAATGCCCTCAATGCGGATGGGGATAGTGCCCTGCATGTGGCCTGCCAGCACGATCGCGCCTACTACATCCGCCCACTGCTGAGCCTTGGATGTAGTCCCAACCAGCAGAATCATGCGGGGAATACCCCCCTGCATTTGGCCGTTAAGGAGGAGCGCATGTCTTGCATTGAGAGCTTTCTGAAGGGTGACACTGTCACGCCCACCGTAAGGCTGGACCTGACGCTCAAAAATGACGATGGATTGACACCACTACATATGGCCATTCGGCAGAACAAGTACGATGTGGCCAAGAAGCTAATCAATCACGATCGCAACTCCATCAGTGTGTCGAATACGAAAGACGGCAACAATGCCCTACACATGGCGGTGTTAGAGCAGAGCCATGCACTGATTGTGCTTATTGTGGATGCCCAGGACACGACCCTTTCGGACATACTAATGTCGCGAAATGCGGCCGGCTATACGCCGCTGGAGCTGGCGCGTTGCAAGGGCGACGAGCAGGTGCTGCAGCTGCTTGAAAAGGTGTATTCGGAGAAGAATGACCCGGCCATGATCTGGATACCCAACAAAATCAAAGAGGAGCTAGACACCTCTTCCGATGAGAGCAGCGATGCAGCCTTAGAGATCAAAACCGAGGCGATGGACCTCAAAACAGAGTCCGAAGAAGACAGCCGCGAAACGGAATTGGGGGGCAATGAAGTTGTCATCGAGACGGAAGTGGAAACAAGCCTCGATCCCAGATACAATCTTCAGCTGCTGTTGAGCAACAAGAAGCGTTTCGATAAGCTAAAGACACTGCTAAACAAACCAATTGGCAGCGGACCGGATGCCCATCAGCCCAAGTGGAAGCATTTGGCACGCATTTCGCATATGGAGCGTTTCAGTTTTTTCTGGGGGAACGCAGAGGCGATGCTCGATTATATACTCAACAATCCCAAGTGTGTGGAGTATAGCACCTTTGCCTTGGCGCTGGAGATGATCGATTCGGAGGCGTCCGCTCTACTTAATTGTGAATAG
Protein Sequence
MSHIFDLDKGKNVPYMNDSSSTSGYSSGNSPTSTMSPAHSPETLALQSDFANLNCANSPQPPPMLNSPYQMVNGNLDASNLTNATSFGNINMFVDHHYYAPPPNATETAKNFGYNRTNGGVGGVVAKSEFGNMPASLRIVEQPVEKFRFRYKSEMHGTHGSLNGVNSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLDSPHSHQLVVRKEERDVCDPHDLHVSKDRGYVAQFINMGIIHTAKKYIFDELFKKKQDRLVFEMKRRELSTKEVQKLHQETEREAKDMNLNQVRLCFEAYKIEDNGNWVPIANPVFSNAINNRKSAQTGELRIVRLSKPTGSVMGNDELILLVEKVSKKNIKVRFFEEDEDGETVWEAYAKFRESDVHHQYAIVCQTPAYKDKDVDREVNVSIELIRPSDDERSFPPLPFRYKPREAIVSRKRRRTCSMATNSSSGGSAQNSEDLPKTLALAQPQGVPQGHELPMGGAPMSGAHLMYHDQTISQEFGRDTVLNDLISSEDFRQLIGTKSGELMQMCSLDIGSLETDGHGRAAERPAFPTVATNRNWTPHFLSAIFKIYEAHRRSPNDSSRKQVEEMFTEHALRNDNNDTLLHEVIISQRTEGQLTQAIRTIEVMKYFKLNDLANNALNADGDSALHVACQHDRAYYIRPLLSLGCSPNQQNHAGNTPLHLAVKEERMSCIESFLKGDTVTPTVRLDLTLKNDDGLTPLHMAIRQNKYDVAKKLINHDRNSISVSNTKDGNNALHMAVLEQSHALIVLIVDAQDTTLSDILMSRNAAGYTPLELARCKGDEQVLQLLEKVYSEKNDPAMIWIPNKIKEELDTSSDESSDAALEIKTEAMDLKTESEEDSRETELGGNEVVIETEVETSLDPRYNLQLLLSNKKRFDKLKTLLNKPIGSGPDAHQPKWKHLARISHMERFSFFWGNAEAMLDYILNNPKCVEYSTFALALEMIDSEASALLNCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00517485;
80% Identity
-