Basic Information

Insect: Drosophila austrosaltans
Gene Symbol: -
Assembly: GCA_035045865.1
Location: JAWNOQ010000052.1:8612972-8615149[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.022 2.5 9.4 0.2 1 23 299 322 299 322 0.97

2 10 6.3 7.1e+02 1.7 0.2 6 23 332 349 332 349 0.96

3 10 0.0002 0.022 15.9 1.3 1 23 355 377 355 377 0.96

4 10 0.00024 0.027 15.6 0.7 1 20 400 419 400 423 0.87

5 10 0.0002 0.023 15.9 0.7 1 23 431 454 431 454 0.97

6 10 3.3e-05 0.0037 18.3 1.5 3 23 462 483 460 483 0.92

7 10 0.0012 0.14 13.4 0.4 2 23 495 517 494 517 0.97

8 10 0.00063 0.071 14.3 7.1 1 23 524 547 524 547 0.93

9 10 2.7e-06 0.00031 21.7 0.8 1 23 553 575 553 575 0.98

10 10 7.7e-05 0.0087 17.2 1.3 1 23 581 604 581 604 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.022	2.5	9.4	0.2	1	23	299	322	299	322	0.97
2	10	6.3	7.1e+02	1.7	0.2	6	23	332	349	332	349	0.96
3	10	0.0002	0.022	15.9	1.3	1	23	355	377	355	377	0.96
4	10	0.00024	0.027	15.6	0.7	1	20	400	419	400	423	0.87
5	10	0.0002	0.023	15.9	0.7	1	23	431	454	431	454	0.97
6	10	3.3e-05	0.0037	18.3	1.5	3	23	462	483	460	483	0.92
7	10	0.0012	0.14	13.4	0.4	2	23	495	517	494	517	0.97
8	10	0.00063	0.071	14.3	7.1	1	23	524	547	524	547	0.93
9	10	2.7e-06	0.00031	21.7	0.8	1	23	553	575	553	575	0.98
10	10	7.7e-05	0.0087	17.2	1.3	1	23	581	604	581	604	0.97

Sequence Information

Coding Sequence: ATGGTAGCCTGTGTGCTTTGTTTGAGCGGCTGCTCAATTGAGACGGCGCTGGGACTCTCCTCGGTGGAGGGATTGCGCTTAAACGTTCGTggaaaaataagcaaacattTCTTGTTCTTTGAGTTACCCGAAGCGGACTGCAGCTCACTGGAGGCAATTTGCCAGGATTGTTGGCGAAATGTACGTTCATTTAGCGAGTTCCACGATCGTGTTTTTGAACTGCATCAAAAACGACGAGGCGCTGTGGAATTTTGTGGGGAAACGGCAATTAATCCACTGTATGCAGTGGAACTGGATGCATTAGCCGAAGGATTCTTTGCCCCTGACGAAATCAAAGTGGAGGTGAATGAGCTGGAACCGTTGGCTAAAATGGAAGTGGAGGCGGAGCTAGAGGATCCTGTCGATACGAAAGCAAAGCAGCAACAGATGGCCAGTGATTCAGACGGCGATAGACCTTTGGCGGAACTCCTGTCCACGGCACCTGCAGCTGCTCCTAGAAGGCGAAGTACGCGACGAGGACGTCCTCCAAAAATACGAAAGCAATCTCCACCCTCTCCTAAGCAAATGAAAAGCGAATTTGATTCGGATAACGATGGTCACGATACGGATTTTGTTTCAGCTGAAGCTGTGCTGGGTACCGATGATTCCGATACCTCCTCCTCCGAGGAAGATAATAATTCTAGCCAAATCAATTCAGATGAAGACTCCTTGCCGGACATTGAGCCAGAGGAACGTTATGCTGAAATCCCCAAACGCGTGGTGGTAAAACCCAAAAAGTATCGCAAACGTCCGAAACCGACAGTACCGCCAGTCCGTCTCAGTCGTGAGGAGATTGAACGACGCAAGGAGCAGCAGAATGAATATGATGAAATCATTTTATCCTTCTTTAAGAAATTCCCCTGTGACATTTGTAATCTGCTGGTGCAGAATTTCGCGGACATGCGACGCCATCAACGTATGTCCCACAACATCGAATCGGGTTACATGAATTGTTGTGGCCGTAAATATCATATACGAAAGGCATTGGCCGAACATGTGCTGGTTCATCGAAATCCTGATCATTTCATGTGCTCGCAATGTGGACGAGTTTTTCAGGATTCACGTACACTGGAAATCCATGAACATTCTCATGCAGCAGAATCAGATGGCACGGGGACAGGCACAGGAGCTGGTGCGGAGGCCAAGGAAAAGCGAACTTATCAATGTGAAAAATGTCCAAAAAGTTTCACTACCAAGGCGGCAATTGAATACCATAATGTGTCCAAGCATGTACCCAAATCAGAGTTCAAATTTACGTGTCCCGAATGCAACAAAAAAATTCCCACAGAGCGCAAATTGAAGGAGCATTTACGCTATATGCACGATCCAGAAACGGCCATTATATGCGATAAATGTGGTAAATCATTACGCTCCCAGACGAATCTCAAGAAGCATCATGAGCTCGAACATTCCGATGAGCCACGTCCTAAACCAGATCCAGTGCAATGTGAAATCTGTGGAACATGGCTGCGTCATCTCTCTGGACTGAAACAACATATGAATACGGTGCATGAGCCACCCGGTGGCGAGCATCGTTGTCACATATGCAATAAGACATCCACCAATTCGCGTGCCCTTAAGCGACACATCTATCATAATCATTTGTGTGAAAGGAAATTCAAATGCGGCATGTGTGAGAAGGCCTTTAAAAGGCCACAGGATTTGAGAGAACACACATCGACACATACTGGTGAAGTTCTATACACCTGCCCCAATTGCCCCATGACCTTCTTTTCAAATGCCAATATGTACAAGCATCGCCAACGATTGCATCGTGCCGAATGGGAGGCAGATCGCAAAAAGCCATTGCCGCCAAACATTATGAAAATCTCTCAAGGGGCCACCACAGCGATGAAGAAGCGTCAAGCAGCGGCAGCTGGTATTTTCCCCCAAACGGATGGCATCGACGGCGTCAATGCGGTGTCGGCAGGTGCTTCTCCATCAGCCCAGTag
Protein Sequence: MVACVLCLSGCSIETALGLSSVEGLRLNVRGKISKHFLFFELPEADCSSLEAICQDCWRNVRSFSEFHDRVFELHQKRRGAVEFCGETAINPLYAVELDALAEGFFAPDEIKVEVNELEPLAKMEVEAELEDPVDTKAKQQQMASDSDGDRPLAELLSTAPAAAPRRRSTRRGRPPKIRKQSPPSPKQMKSEFDSDNDGHDTDFVSAEAVLGTDDSDTSSSEEDNNSSQINSDEDSLPDIEPEERYAEIPKRVVVKPKKYRKRPKPTVPPVRLSREEIERRKEQQNEYDEIILSFFKKFPCDICNLLVQNFADMRRHQRMSHNIESGYMNCCGRKYHIRKALAEHVLVHRNPDHFMCSQCGRVFQDSRTLEIHEHSHAAESDGTGTGTGAGAEAKEKRTYQCEKCPKSFTTKAAIEYHNVSKHVPKSEFKFTCPECNKKIPTERKLKEHLRYMHDPETAIICDKCGKSLRSQTNLKKHHELEHSDEPRPKPDPVQCEICGTWLRHLSGLKQHMNTVHEPPGGEHRCHICNKTSTNSRALKRHIYHNHLCERKFKCGMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEADRKKPLPPNIMKISQGATTAMKKRQAAAAGIFPQTDGIDGVNAVSAGASPSAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00503448;
90% Identity: iTF_00556024;
80% Identity: iTF_00577975;