Basic Information

Gene Symbol
hang
Assembly
GCA_035045865.1
Location
JAWNOQ010000007.1:15594256-15606665[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.3 33 5.9 1.0 3 23 310 331 309 331 0.93
2 18 0.22 24 6.3 3.5 3 22 435 454 433 454 0.89
3 18 0.00064 0.072 14.3 3.3 1 22 550 571 550 573 0.90
4 18 0.074 8.3 7.8 0.1 2 21 585 604 584 605 0.93
5 18 0.00074 0.083 14.1 0.2 2 23 735 757 734 757 0.95
6 18 0.0021 0.24 12.6 0.1 1 23 765 788 765 788 0.96
7 18 1.7e-05 0.0019 19.2 0.1 2 23 875 896 874 896 0.97
8 18 0.00031 0.034 15.3 2.9 2 23 991 1013 990 1013 0.97
9 18 0.024 2.7 9.3 0.2 2 23 1022 1044 1021 1044 0.95
10 18 0.0013 0.14 13.3 0.1 1 23 1057 1080 1057 1080 0.97
11 18 0.00013 0.015 16.4 1.1 1 23 1137 1159 1137 1159 0.99
12 18 0.0021 0.23 12.7 0.9 1 23 1167 1190 1167 1190 0.96
13 18 0.46 52 5.3 1.5 2 20 1198 1216 1198 1216 0.96
14 18 8.9e-05 0.01 17.0 0.2 3 23 1316 1336 1315 1336 0.98
15 18 0.0054 0.6 11.4 0.1 1 23 1371 1393 1371 1393 0.97
16 18 0.00064 0.073 14.3 0.7 2 23 1477 1499 1476 1499 0.93
17 18 1.3 1.4e+02 3.9 0.1 2 20 1519 1537 1518 1539 0.91
18 18 0.0068 0.77 11.0 0.3 3 23 1554 1574 1554 1574 0.98

Sequence Information

Coding Sequence
ATGTGTGACACAGCGATAACAGTAAATTctacagcaacaataacatcaACAGGAGCAATACCAAATGCATCTGGACCTCAAATACCAGCTACAATTATAGCCACagctacaaaaaaagaaacacagcGAACGCcacaaaattgttgtcgacTCTGCATTGCTCCGGCCACAGAGTGTATTTCGATCATCAATAGCTATGCAGCCGATAAGGAGCCGCTGACCACCAAAATCTATAATTGCGTCAATATCAAGATCACATCCCAGGATCGGTTATCACAACAGATTTGTCATGCTTGCATTAGCTATCTGAATTCTTGGCAAAGTTTTAAGAATCGCTGCCTTAGCTCACAGTCGAAGCAGCGACAATGGCTGGAGACTTCAGCGACAACGACGACGCCGCCGACGACGACGAGTAAAAGCAAACTCCTAAGCTATTTGGACTTGAATAGCGCTGAGAATGGAACTGGGACGGCATCGGATCACCAGTTGGCGGCGGAGAGCGAAGCAATTGTTGTCGGCAGCAGCGATATGGTATCCGATGAAGCGGCGGACAAGTCGACTACCTCAACATCATCtgcgacagcaacaacagcagcattgGCAGCCAATATATTGGATGGAATACCAGCGCTAAAGAAACGCAAATCTTTAACAGTCTATCCTCTGCCCGCTGTGCCCATTAAAGATGAGCCTATAGATGATACAGAAGATGACTATCAGATGAAGTCCATAGACGAATCCATAGATGATATGGTAGATCCCACAATGTTCCTAGAGCGTTCGGAGCTTGAAGGCGATGTGCCATTAAtgACTTCGGACTATGATTATACAGCCCAGCATGGCGTCACAGCTGCTGTGGCGGCTGCCTCACTACCAGCCAGCGCTGTTGCTAATGTGGCCGCTGCCGGTGATTCAAAGGTGGCCAGTTGTCGCGCATGTAGCCTACAATTTTCCACAAGAGCAAATGCCCGCCGTCATGAGCGAAATCTGCATCCGAACCTCTTTCAATTGTCCACCGATTCGCCTAATAATACACCAGTTACCAAACCAACGCCGGCCTTAGCTGCTGCCCTGGAAATTCAACgggccgctgctgctgctgccacagcCGAGGCAAATCGTTCTGGTGGCAATATGTCCACACAAAAGTATCGTCAGGTGGTAATGAATGCGTTTATCAAATGTGAAGCTGGTGGCTATGACTATGACAATCCCGAGCAATATCAGTCTCTTTTAAGTCGCgataaaattgagtttatcgAACAGAATGCCGAATTTCTCGAGCAGTATCAAACAATGACCTGTCGATGTTGCAACAAGTTCTTCAGTACCTATAAGAACTTCATGGCCCATGTGCGAAAGAAGTATCCATTGTTGCCACGAAACCTCTGCTTTAATTGCCTCAAAATGAATGATTCGAAGGCGTTGTTTATCTCACATCTGAAGAAGCGCAACTGCATCAATTTGTACAGAGTGATGAATGCCTTGAATAATAAGCAAAGTGATGGAGTTGCAACAGTTGCTTCTTCTCCAGCTATTGTTGTGCCAGCAACAGTGGCGGCTGTCTCGGGATcaagtacaacaacaacaactacttcAGACCGGCCAGAGAAACTGCGCGCCAAGGAGCTACTGGTCAATAAGCTCTACGAATGTAAACTCTGTCCAAAAGGTTTCCGCACCAAACATGAATTCCGCACTCATGTTTATGACAAGCATGCAGATGTTCAGCGGAAGGATAACAATTCCATTCAGTGCAGCTTCTGTGGCCTAGACTTTGCCGATCCTGTAGACAGGCGACGGCACTATAACAACATGGATTGCATTGTCCGCCTGCGTTGCATGACCTGCGATGCTAAATTGGAGACACATCAACGATTCCTCGATCATGTATATCAGGATCATTTGGGAGGCCTGAGCAGTGATAATGCCTCATCGACGACTGTAAGTGGCGCCAATGTGGACAATTCGCATTCCCCTGGCAAAAAAAATCTGCTATGTGCTTTGGGCATAGGATCAGCAGATGAATCCCGGAGTGCCACGCTACCATTAAATACATCTACGCCGAAGCCAGTTGGAGGCGGAGCATCATCAGCTGCATCAACAACATCAGCTAGTGGTGGCTTATTAGGCGGTGGTACTTCAGCCAGTCGCGATCGTGATGGAGCACCAAAGTCTCAATACTTCTCTCGCATGCCCCAAGTCTGTCCCATTTGTGGCCAGCAAtataacaactacaacaatgtTCTCCGACACATGGAATCGAAGCATCCCAACAAACTGCCCGAAACGTACAAATGTGTACGATGCGGTTTAGGCTATCCAAGAATCTCGTATCTCCGCGAGCACATGATTAATGTCCATGGCGTTGATAAAAATCGACATTCAGGCGGATTTGAATATATTGTTAATGCGGATGCCGTTAAACTGGCTGATGGCAGTACACCGAATGTCTATACGGGCAGATATGATTATGTGATGAAGGATCTGATGTCGATAACAAATGGTGGGACCCTCGatgacgatgatgaggaGACAAGCGGTAGCGTGGCCAAGAAGATACGTCTAGATGATAGCAGTAATAACAGTAGTTTGATGGGCATGGCCGCTACACAGCAAAAGGAGTGCCCCATCTGCAATGCGGTATTCAGCAACAACATTGGGCTATCAAATCATATGCGTTCCCATTATACAGCCTCAGCAAATGCTTCAGCCTCGGCGAATGCTTCGGCGTCGACTTCCGCCTCATCCAGCACAAATGCTGCTTTGGCTGCAGCCAATCGCATGACACCGAAATCACTGACTATAACAGCAGCTCCCCCAATCACGGCGGAAGTATCACAAACAGTGCCACCAAAAAAGGATTCGGCGGCTACTGTCCtctcgtcatcatcatcggcatCCCATGTCCAGGGGTTACAATTTCGCCGCAGTTTGGATCAGGCAGCCGATCGTCGGTTTCGGCGAATGCGTTGCCGTATATGCCAGAGACGCTTCAGTTCTAAGAAATCGTATCGTTATCACATGCTCACCGATCATCAAGTCCAGAATGTCCAAttcataaaatgcaaattgtgtAATGCCGAATTTGCCTACGAGAAGGGTCTTAAAGTGCATCTGTTTAAGGTGCATGGCAAGGCCATCAAGGATGAGATGATAATCAAGCAATTTGAATGCGAGATTTGCTCCATTGTATATAGCTCGGAATTGGAATTGCAGCAGCATAAGCGAAGTGTCCATGAGTTGGCATCAGcttcatcatcagcagcagcaataacaacagcatcatcaacaacagGAACATTATcggcagtaacaacaacatctTCAGGCGAAACAACAGGAACAACTCTGGGAATAGGTGGCAACAATGGGGCTAGTTCTACTATTCCCGCACCACTTTACTGGTATCAATGCAAATATTGTCCATCCAATTTCAATACCAACAAAAAGTTGGCAATTCACATTAATTCCCATGATGAGTTCGATTCCAATGATTATTCGTGCAAGGATTGTGGCAATGTCTACAGTGGAAGGAAAAGTCTTTGGGTACATCGGTATAAGAAGCATCCGCAGGTGCCTGATCCGGCCGAGTGTTGTCTGTGCCGCAAAGTCTTTTTCGATCGTCAAATGCTGGACAATCATATGCCGACTTGTAATCGCAAGCCCATAACGTCCACTGGGgcacatcaacagcaacaaccgcagcaacaacaacaacaccaccaGCAAGATCAGCTAAGACGCGGTCTGGTAGTATTCAAACACAAAACTGGCGACGATGATGAGGACGAAGAGGATGAAGatcaattgcaacaacaagcGCAACTTCAACTGGATGATACAACCGATGACGCTGCCGACGTGAGTAATTCTCCTGCTGTCGCTGCGGCTTCATCCTCGTCCACGTCCGCTCACGTTAAGATACGCATACCTGAAGTGGCATGTACCATTTGTGGGGCAAGATTCATTGATCAGGAAATGTTTACCAAACACATACAGAAGCATGAACAGGAATTATATGTAGATAATCCCTTGGCAGCCATGTTCGATGATGGTCCAGCTGATCCCGGACAGTTTCAAGTGGAGCGACAGAACGAGAATGGGGAATATGCATGCGATTTATGTGCCAAGACATTCCCCCAAGTGATTGCACTTAAGGTGCATCGCAAATGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACAGCGAAGCGACACagttgaacaacaacaacaacaattcgaTGTTGCATCTACGCGAATTACATGCAGTGGGTCTGGTGcccaatcaacaacaacagcagcaactgaaCTCCAGTCACAACCAGAACCagagtcaacaacaacaacagagccACAACTCATCAGGAACCTCAACGACGGCAACAACGAACAAATCGCTGAAACGGAAACGTGAATTGAAATGCGATTATTGTGCCTCCACcttcatcagcaacaacaatctgCGTCGTCATATGTATGAACTGCACAAACATGAGGTTAGCCATTTGCCAGAACCACCAGTTATTGTGGTAGATGAGCTACTGTCATGTCGCCGTTGTAATCTCCGATTTGATACAAAGGAATTGTGGATTGAGCATAAATTGGCCGATGCTAAAGTGGTGCGTCCGTTTTGCCCCTTTCAATGGGGATGTGATTTATGTGGCGAGTATTTGTCACGCAAGGAGAAGCTCATCAATCATATTAATAATCATCTTAAGGAGGATGTTATAGTCCCTGTGGCTGACAAAATTATCGTAACAGTCTCAGGTGCGACAACATCGAATACGACACCAGCAGCCCTCGCAACAGAAGCATCCAAAGTTGGTGTATTAAAATCGGAAATAAAACCAGAATCAAATGAGGAGATCAAATCAACTTTGGCAGCAAATGCAGATGGATTGGAACAGAAGGTATCGATAACAGCAGAAGGGGCTAAGGGAATATCCTTAGATGTGAAGAAGGAAAAGGGGGCGACTGCTGATCCAGATGATAGCGATTTGGACGAAGCAGAGGATGATGATAGTtcagatgacgatgatgatggagACGACActtctgatgatgatgatgacgatgatgatgaggatgacgGAGAAGATACTtctgatgacgacgacgatgaaaACGATGATGTGGAAGAGGAGCAAGTGGTTGAAATGCAGCGGCAATCTAAACCAATTCCAGTtgctgatgatggtgatgaccTTGTGGAGGAGGTACTTAGCTCAGaagcagatgatgatgatgatgaggacgatgatgatgacgatgatgatgatgatgaagatgaggaGGAAGCTGAAATCGATGAGGAAGAGATTCCAGCTCAGCCGATGCTTAACGGAAAGCACCGGTTAAAAATGTTACCTAATTCAGAGGACGATAATATTGAAGACGATGTCGAAGATGAAGATGAGGGGGTAATGCCCATTGAAGATATTATTGAGGAGTATGATgtagatgaagatgatgatgatgatgttgaagAGGATGTAGATGGTGTCGATGTAAGTGGTGGTGTGGTCAATGAtggcgttgttgttgtaggAGAAGTTgtcgatgatgacgatgataatgataacgatgatgatgatgacgatgatgatgatgaaagaAACAGAAGGACAGCCAGAGCAACAGCCTCATCGACTACATCATCATCGGAAAGTGAATCATTAACAACCAATACAACAGCACATTCAATGGGAGCAACTGCAGAGCCACATCAAAAGCCATTTTCTGAATGGACCAAAAATGTCAACGACAACGGGTCTAAAAATGGtgacagcagcggcagcgacagcagcagcggtGAGCACTTCTTCTAA
Protein Sequence
MCDTAITVNSTATITSTGAIPNASGPQIPATIIATATKKETQRTPQNCCRLCIAPATECISIINSYAADKEPLTTKIYNCVNIKITSQDRLSQQICHACISYLNSWQSFKNRCLSSQSKQRQWLETSATTTTPPTTTSKSKLLSYLDLNSAENGTGTASDHQLAAESEAIVVGSSDMVSDEAADKSTTSTSSATATTAALAANILDGIPALKKRKSLTVYPLPAVPIKDEPIDDTEDDYQMKSIDESIDDMVDPTMFLERSELEGDVPLMTSDYDYTAQHGVTAAVAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPVTKPTPALAAALEIQRAAAAAATAEANRSGGNMSTQKYRQVVMNAFIKCEAGGYDYDNPEQYQSLLSRDKIEFIEQNAEFLEQYQTMTCRCCNKFFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVMNALNNKQSDGVATVASSPAIVVPATVAAVSGSSTTTTTTSDRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGLSSDNASSTTVSGANVDNSHSPGKKNLLCALGIGSADESRSATLPLNTSTPKPVGGGASSAASTTSASGGLLGGGTSASRDRDGAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEETSGSVAKKIRLDDSSNNSSLMGMAATQQKECPICNAVFSNNIGLSNHMRSHYTASANASASANASASTSASSSTNAALAAANRMTPKSLTITAAPPITAEVSQTVPPKKDSAATVLSSSSSASHVQGLQFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGKAIKDEMIIKQFECEICSIVYSSELELQQHKRSVHELASASSSAAAITTASSTTGTLSAVTTTSSGETTGTTLGIGGNNGASSTIPAPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECCLCRKVFFDRQMLDNHMPTCNRKPITSTGAHQQQQPQQQQQHHQQDQLRRGLVVFKHKTGDDDEDEEDEDQLQQQAQLQLDDTTDDAADVSNSPAVAAASSSSTSAHVKIRIPEVACTICGARFIDQEMFTKHIQKHEQELYVDNPLAAMFDDGPADPGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDSEATQLNNNNNNSMLHLRELHAVGLVPNQQQQQQLNSSHNQNQSQQQQQSHNSSGTSTTATTNKSLKRKRELKCDYCASTFISNNNLRRHMYELHKHEVSHLPEPPVIVVDELLSCRRCNLRFDTKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVADKIIVTVSGATTSNTTPAALATEASKVGVLKSEIKPESNEEIKSTLAANADGLEQKVSITAEGAKGISLDVKKEKGATADPDDSDLDEAEDDDSSDDDDDGDDTSDDDDDDDDEDDGEDTSDDDDDENDDVEEEQVVEMQRQSKPIPVADDGDDLVEEVLSSEADDDDDEDDDDDDDDDDEDEEEAEIDEEEIPAQPMLNGKHRLKMLPNSEDDNIEDDVEDEDEGVMPIEDIIEEYDVDEDDDDDVEEDVDGVDVSGGVVNDGVVVVGEVVDDDDDNDNDDDDDDDDDERNRRTARATASSTTSSSESESLTTNTTAHSMGATAEPHQKPFSEWTKNVNDNGSKNGDSSGSDSSSGEHFF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00501216;
90% Identity
-
80% Identity
-