Daur005286.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila auraria
Gene Symbol
-
Assembly
GCA_008042615.1
Location
VNJW01003517.1:62753-67233[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.0014 0.14 12.9 1.5 1 23 209 231 209 231 0.96
2 20 0.048 4.8 8.1 1.2 1 23 238 260 238 260 0.95
3 20 0.018 1.8 9.4 0.4 2 23 292 313 291 313 0.95
4 20 0.00028 0.028 15.1 0.9 1 23 386 409 386 409 0.94
5 20 0.84 84 4.2 2.2 1 23 450 472 450 472 0.94
6 20 0.011 1.1 10.1 0.1 2 23 484 505 483 505 0.96
7 20 0.003 0.3 11.9 1.3 1 23 586 609 586 609 0.96
8 20 0.0078 0.77 10.6 0.3 2 22 619 639 618 639 0.93
9 20 0.22 22 6.0 6.8 1 23 648 670 648 671 0.94
10 20 0.0013 0.13 13.0 1.5 2 23 686 707 685 707 0.97
11 20 1.3e-05 0.0013 19.3 4.3 1 23 714 736 714 736 0.98
12 20 0.005 0.5 11.2 3.1 1 23 874 897 874 897 0.97
13 20 0.0043 0.43 11.4 1.2 1 22 904 925 904 925 0.95
14 20 0.018 1.8 9.4 1.4 1 23 934 957 934 957 0.93
15 20 6.6e-05 0.0066 17.1 2.3 2 23 976 997 975 997 0.97
16 20 6.8e-05 0.0068 17.0 0.4 1 23 1004 1026 1004 1026 0.98
17 20 0.044 4.4 8.2 0.0 3 21 1054 1072 1053 1073 0.93
18 20 0.0018 0.18 12.6 3.0 1 23 1119 1142 1119 1142 0.97
19 20 0.011 1.1 10.1 0.6 1 23 1179 1202 1179 1202 0.96
20 20 0.00021 0.021 15.5 1.5 1 23 1230 1253 1230 1253 0.97

Sequence Information

Coding Sequence
ATGCTTCCCCCGAATATCTGCCGCACATGTGCGCTTCAGAACACGGATTTGCGGCCGTTGTCCAGCTGTCTGGCCAAAGACGCCtcaaaaagtttttatgatGTGCTTCAGGAGCTCACGCAAATCGATCCCCTGGTTGAGAATTCGGGTGACAATCTGCCGCAGCACCTGTGCACCGAATGCTTGAAGAGATTGGAAAGTGCCTACGCCTTTGTGGAGCAGGCCAGAAAGGTCAATGCAGAGCTGTTGGTTCGCTTGCGGGAATGCCTGGACGAAATGCCCATTGATATTCcgcaagagcagcagcaaatcAAGACCGAAGTAGACATCGATGAAACGACTCCCAAGTgtgatgtggatgtggattcCACCGGAATATCGCCTGTGGAGTTCAAATGGCAGCCGGAAAGTGGCAGCGATGAAGAATCTGGTGGAGCCGCAGCCAATGACGAGATTGAGGTCGAGATGAAGTCCTATTCCCTGCGACGTAGCGCGAGGAAAATCAAGCAGCCAGTGGAAAGCGATAATGAGGACTTAATTCCCACGGAACCGTCGCCCACCAAACGTCGTCGTGGGCGTCCTCCCGGCCCGGCTAAGCGCCAGTCGCTGACATCCGACGGACGCCACGCCTGCAAGGTGTGTGGCAAGACCTTCTCCTGGTTCCGTGATATGCAACGCCATGCCCGCATCCATTACGAGAAATCCAATGCCTACATATGCGATACATGTGGCAAGGGATTCCTGCGCAAGGACAAGTACACATTCCATTTACGCTGGCACGAAAAGCGCGATGCCAAAGGGAAGGCTCTGCAGCTGGGGAGCGAGTGGCGCTTCGCCGAACGACTGTACAGTTCCGGCAGGCTGAAGAGGATTGAGTGTAAGCTGTGTGGCTTGAAGTGTCCAAGAATTCAGGAGCTAAGAATTCACCTGGTCAGTCATCGGAACGTGGAGAGTCTGCTCCAGTTGACGGCGAATAGCGATGTGATCAGGGAGCACTACGCCGACCAGCCTAGCGACTTGGACGGCGTGAAACAACAAATTATCGTGGACATTGCGGCAGGACACATTGATAAGTTTGCCTCCGTGGTGAATTTCCATGGCTATGAGCTGGGATTGTATGACTCCGACGAGGAATCGGCCAGCGAAGAGTCCAAATATGAGTGTACGGTGTGTAATCTTCCCTTCTCCCGGAAACATCAAGTGGTGAGGCACACGCTGGAGGAGCACGCACAGTCCTCCCTCTCAGAGCTTCCCTGGCAACGCTGCAGTTTCTGTAAAATTGGATTCCTCTGCTCCAGACTCTACGATTGCCATGTCAGCACGCAGTGTCAGAGCAAACGGAAGCGGCATAGCTGCCCAAGGTGCCCAGGAAAGTTTATGTGGCCGGAGAATCTGAAGAGGCACGCCTGCTTCCATCGGAACGAGGAAGCCACGCTTGTCCGCCACATCTCCTGCTCCTTGTGCGATGAGTCGCTGCCCACCTTGGCCAAGCTGCGTATCCACCTGGTTACCCACCAAACTGACCTGTGTGGTATCGATCCGGAGCACACCTCCACGTTCTTTCAGTCGTTCCACCCCAACGGATTGGACTGCACTCCGGAGGAGCTGGGTGTTCGCATAGCTGAAGACTTCGAGGTGCAGGACTTTGATCGCTACTACAACGCCTGCACGGGCAGTGGCCAGGAGCTGGATCTCTTTGACTCCGAGACCGAGCAGAGCGGCGATGAGCAGGAGGAGCGTGAGAAGCCCGTCTCGCATACCTGTCTGCTGTGTGGAAAGGTGACGAACAGGCTCCTGACCCTGATGCAGCACCAGAACAGCGACCACTCAAAGGCGGCGACAGAGTTGCTGTGCTCCTGCCAGGATTGTGGTGCTGGCTTTATCAGTGACGCCCTGCTCCAACAGCATCGCCGCCGTGTCTGCGCCAAGAAGCACTTCCGCCATCACTGCCAGAGCTGTAATCTGCGGTTCGTGTGGTCGAGTAATTACGAGCAGCATTTGAGGACCCACCACAACCAGACTCCAGAGGAGGAGCAACCGGAGGAGGGCAAACTGCAATGCGACGACTGTGAGAAGGTCTTCATCTGGCACAAGGATCTCACGCGTCACAAGCGATTGCACCAGCCGCAGTCGGCGCAGTTCGAGTGTCCCCATTGCGAGCGCAAGTTCCACCGCAAGGATGGCTTAAAGTCCCACCTGCGGGTGCATTCGGTGGAGCAGCTGGTGGAGCAGCAGCCTCTCACATCCGACAGTGATCAGGTTCTGGACCTGCTGATTCGTCCTCATGGCTGCAAGCAGATCCAGTGCATGATCTGCCTCTCACGACACGCCAAGATCTCTGATCTCCGAATTCACCTGACCTCCCATCAATACGGATTGAGCTTCTCCCCCGAGGCCGATAGTTCCAGTGTCTCGAAGTCGCTGTATCCGGAACTGGGCACTGCCTTAGACAGTGACGAGCTGGCGGAGAGGATTATGGCTGATGTCGACAAGGGACTGGAGCTGGATCGATTCATTTCCATTACGAACGAAGCTGGCCTCGAATTGAACTTGGATAGCAGCGAAACGGACACTGAATCCGAGCCAGAGACAGAGGAGGAAGACCAATCTAGTAATAACTACTCCTGCTGTCTCTGCCCCACGGAGGTGAAGAGAAAGCACCAACTCTATGCCCACCAACGGGAGGCTCATCGGTGGGAGGAGGCACCTTTCGTTTGCTCGCACTGCCAGGCTAGGTTCGTCAACGAGTCACTGCTAGATCACCACTCCAGGACCCTTTGCGGCAATGCCCAGAAGCGCTTCCAGTGTCGCAAGTGTCCGCTTCGTTTCCGCTGGCGCGAGAACCTGAAGCTCCACCTATACCTGTCCCATCAGCAGGCTGAGATGCCAGCTACAGAGGACTCGCCGCAGGCGGAGGCCGAACTGCAGTGCAGAGAGTGCCAGCGAACGTTCAAGATGCAGAAGGATCTCACTCGGCACACGCTGATGCACGCCCGGGAGGCGACGATCTACCGGTGCCGCTGGTGTGCCCGCCGATTCTACCGTTGGGCCAATCTCCTGCAGCACATCGCGCGCCACGGCATCCGGGCTAGCCAGTTGCACTACGCCGAGGCTCTCCTGGACTCCTACGGAAACCCAGGCGGGCGGAAGACGGTGGCGTGTCGTGTGTGCAATGTCAGCTTCTCCAGCATCGCTGCCCTGCGTCTGCATCTGGAGACCATGCCGGCCGGCAGTCACCACGAGCTCTCCTCATTGAAGAACTACTCGATCACCAACCAAATGGGTTTCGAGCTGGATCTCCAGGACTCGGAAACGGATGAGGAGCAGTCGAAGCCTCCCGGGGTGCCTGCCTATTACACGTGTGGCATGTGCCAGTTGAGGTGTGTGCGGAAGTtcgagctgcagcagcaccagcagtcCATGCACCGGCTGGAGAAGATTCCCGACGGCTGTGATCAGTGCATCTTTAAGAGCGTCTGTCCCGATCTCATTGCCCACCACAAGAGAACGCAGTGCGGCAATCGGGAGAAGCAGTTCACCTGCGTTCGCTGCGGCTACAAGTTCATGTGGGAGTCGAATCTGCTGACGCACATGCAGCTGCAGCACGGGAAGATCGACAATCTGGAGCCGGAGGAGAGCAAAGAGGCTTCGGCGGAGGAACCGGCCGGCAAGGCCGGTTGCCCAGTCTTTCAGTGTGGCCTCTGCCCCAGAAAGTATAACCGAAAGGATCGCCTGACGGCGCACGTGAAGAAGTTCCATGGGCCCGATGGCAGGGGCCCCGAGGTGCAGGGCCACTACGAGGAGGGTCAGAATTCGGGGGAGCCTACAAGGCGCACGGTCTTAGAGCAGTTTACTGTATGA
Protein Sequence
MLPPNICRTCALQNTDLRPLSSCLAKDASKSFYDVLQELTQIDPLVENSGDNLPQHLCTECLKRLESAYAFVEQARKVNAELLVRLRECLDEMPIDIPQEQQQIKTEVDIDETTPKCDVDVDSTGISPVEFKWQPESGSDEESGGAAANDEIEVEMKSYSLRRSARKIKQPVESDNEDLIPTEPSPTKRRRGRPPGPAKRQSLTSDGRHACKVCGKTFSWFRDMQRHARIHYEKSNAYICDTCGKGFLRKDKYTFHLRWHEKRDAKGKALQLGSEWRFAERLYSSGRLKRIECKLCGLKCPRIQELRIHLVSHRNVESLLQLTANSDVIREHYADQPSDLDGVKQQIIVDIAAGHIDKFASVVNFHGYELGLYDSDEESASEESKYECTVCNLPFSRKHQVVRHTLEEHAQSSLSELPWQRCSFCKIGFLCSRLYDCHVSTQCQSKRKRHSCPRCPGKFMWPENLKRHACFHRNEEATLVRHISCSLCDESLPTLAKLRIHLVTHQTDLCGIDPEHTSTFFQSFHPNGLDCTPEELGVRIAEDFEVQDFDRYYNACTGSGQELDLFDSETEQSGDEQEEREKPVSHTCLLCGKVTNRLLTLMQHQNSDHSKAATELLCSCQDCGAGFISDALLQQHRRRVCAKKHFRHHCQSCNLRFVWSSNYEQHLRTHHNQTPEEEQPEEGKLQCDDCEKVFIWHKDLTRHKRLHQPQSAQFECPHCERKFHRKDGLKSHLRVHSVEQLVEQQPLTSDSDQVLDLLIRPHGCKQIQCMICLSRHAKISDLRIHLTSHQYGLSFSPEADSSSVSKSLYPELGTALDSDELAERIMADVDKGLELDRFISITNEAGLELNLDSSETDTESEPETEEEDQSSNNYSCCLCPTEVKRKHQLYAHQREAHRWEEAPFVCSHCQARFVNESLLDHHSRTLCGNAQKRFQCRKCPLRFRWRENLKLHLYLSHQQAEMPATEDSPQAEAELQCRECQRTFKMQKDLTRHTLMHAREATIYRCRWCARRFYRWANLLQHIARHGIRASQLHYAEALLDSYGNPGGRKTVACRVCNVSFSSIAALRLHLETMPAGSHHELSSLKNYSITNQMGFELDLQDSETDEEQSKPPGVPAYYTCGMCQLRCVRKFELQQHQQSMHRLEKIPDGCDQCIFKSVCPDLIAHHKRTQCGNREKQFTCVRCGYKFMWESNLLTHMQLQHGKIDNLEPEESKEASAEEPAGKAGCPVFQCGLCPRKYNRKDRLTAHVKKFHGPDGRGPEVQGHYEEGQNSGEPTRRTVLEQFTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00491633;
90% Identity
iTF_00609295;
80% Identity
-