Daur007057.1
Basic Information
- Insect
- Drosophila auraria
- Gene Symbol
- Ssb-c31a_2
- Assembly
- GCA_008042615.1
- Location
- VNJW01000467.1:20967-22199[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1 1.3e+04 -4.0 0.4 31 38 28 35 24 35 0.77 2 2 2.9e-22 1.2e-18 66.5 0.2 3 51 246 294 244 295 0.96
Sequence Information
- Coding Sequence
- ATGCCGGTCCCTAAAGAACTGTACAACTCATCTTCGGATAGCGATGAGCCATTAGAATACAAGGTGCCGACAACCAAAGCTCAGAAGACGCCGGCCAAGAAAGGGACAAAACGCGCTGCCGGCGCTAAAGCACGCAAGGAGCAGCCAgttaaaaaagccaaaaagtcCTGGACTCTGGTTGACAAGGAGCCCTCTGGCTCTGGTGAGGAAAGTGAGGTAGAAATTGTAACCAAACTGGCTTTGGCCAGGGATTCATTGGAGCGTGAGTTGCCGCGGGTCAAGAAAGCCAAAATGGCGGACAAGAAGCCCTCTGTGTCTAAGCGCAAGGTGGCGCAGGTAAAGAAAGCCAAAATGGCGGACAAGAAGCCCTCCGTCTCCAAGGAGGTAAGTGAACTGGAAGTTCAGCGCAAGAAGCCTTCAGTGAAGAAAGCCAAGGTTTCTTTGGCCGTGGAGGGCAAGAAGCCCTCTGGCTTTAAGGAGCTCAAGAAGCCCCAGGTCAAGAAAGCCAAGGTGTCGGCTGGGGCTGACGAGAAGCCCTCTGGTTCAAAGGAGCTCAAGGAGCGCCAGGTCAAGAAAGCCAAGGTGTCGGCTGGGGCTGACGAGAAGCCTTCTGGTTCAAAGGAGCTCAAGGAGCCCCAGGTCAAGAAAGCCAAGGGGTCCTTGGAAGTTCTTCCAAAACTAGATTTGGCACATGACCAATTGCAGGTGAATGCAGGCAAGAAGACGGTTATTGTTCTAGAGAACCAGCGCCAGGTACATATAAAGGAGTTCCGTGGCCATAAAACGGTTGATATACGGGAATATCATGAACGTAATGGCAAGGTCCTGCCCGGCAAAAAGGGCATCACCTTGTCGGCCAACCAGTGGAAGCAGCTGATGGAAAAGGCAGACGAGATCACCCGCGCAGTTGAGGAGTAG
- Protein Sequence
- MPVPKELYNSSSDSDEPLEYKVPTTKAQKTPAKKGTKRAAGAKARKEQPVKKAKKSWTLVDKEPSGSGEESEVEIVTKLALARDSLERELPRVKKAKMADKKPSVSKRKVAQVKKAKMADKKPSVSKEVSELEVQRKKPSVKKAKVSLAVEGKKPSGFKELKKPQVKKAKVSAGADEKPSGSKELKERQVKKAKVSAGADEKPSGSKELKEPQVKKAKGSLEVLPKLDLAHDQLQVNAGKKTVIVLENQRQVHIKEFRGHKTVDIREYHERNGKVLPGKKGITLSANQWKQLMEKADEITRAVEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -