Datr012737.1
Basic Information
- Insect
- Drosophila atroscutellata
- Gene Symbol
- Znf639
- Assembly
- GCA_035041605.1
- Location
- JAWNLA010000108.1:14304125-14306583[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.015 0.96 10.0 0.4 3 23 316 337 315 337 0.91 2 10 0.00016 0.01 16.2 0.5 6 23 346 363 346 363 0.99 3 10 9.7e-06 0.00062 20.0 0.3 1 23 369 392 369 392 0.98 4 10 0.00013 0.0085 16.4 0.5 1 23 404 426 404 426 0.98 5 10 0.00032 0.021 15.2 7.7 1 23 433 456 433 456 0.96 6 10 1.4e-05 0.00087 19.5 1.8 1 23 462 484 462 484 0.96 7 10 0.34 22 5.7 0.9 2 23 493 514 492 514 0.96 8 10 0.00013 0.0082 16.5 2.8 2 23 520 542 519 542 0.95 9 10 2e-07 1.3e-05 25.3 0.7 2 23 549 570 548 570 0.97 10 10 0.0002 0.013 15.8 4.4 1 23 576 599 576 599 0.96
Sequence Information
- Coding Sequence
- ATGATCTGTCGCTTGTGTTTAAAAAGCATAAACGCAAACAATGCCGTCTATCTGTTCGAAACGAGCGACACCCTGGCCGAATCCTCGCTGCTCAAGATAATAGCCAAGTTTCTGCAGCTGGAGATAATGCCCGATGACAACATCTCGACAAACATTTGCCACGATTGCTGCGAACATTTGGAGGACTTTAACAACTTCTGGCAACTGGTCGagcaaaagcaattaacaCTTAAAAAGGAGTTCCTCAACGTGGACGTCGACTGCGTAGCCCTCAAATGGACGGGCGGCATCGATGTGGATGTCAATATTGATGAGCTGCCGCTGGTCACCGACGAGATGGACGAGAAACCCCTCGATATACATAATCTCAGTCTCCTCGGCAGCGTTCTCGATGTGAATGTGGATAGTGTGGAGGTGCCGCAGCTGCATGCTGCACCAAAACACTTGCACAACCCCGACCAGCTGCTGCCCCTGCACGCCTTCAATcctgatgatgctgatgatgatgacaacgtcgacgatgtcgatgtcgatgagAAGCCCATAATGAATGAGAGCAGCGATAGCACGCCGCACACTTCCTCAGATGATGATGATGAAGTGCCTCTGGTGAAGCTGAAGCACAAGCTCAAACCAAAGCGGAAGGGACGCGTTGTGGCACGTAATGAGCAGCGCCGGCTAACCCTCGCCCAGGAGTTGAATCAGCTGCTGGATGACACCGACACTGGAtgcgataacgataacgatggcgatggcgacggCGTCAATCGAGGGACTCGCAAACAGCGGaacacaaacagaaatacaaacacaaataacaatGCGCCAACGGATACACAGCAGAGCGAACTGCAGGCGGCCATGGAACGGAAGCCGAAGGGCTGCTCGCGAGCGCAGCTATCGAAGCGTTACGAGGAGGCCATCGCCAGCTATATGAATGCCGACTGTGATCTGTGCGACTTCAGCACCAAGTACCTGTCCCAGTTGAAGGTCCACTTCCTGGAGGTGCATCAGCGCGACGCGTATCTCAAGTGCTGCAACAAGGTCTTCAATCGCGCCTCCAAACTGATGGATCATATACGCAAGCACATCAATCCCAAGCTATTCACttgttCGATTTGCAACAAGTCGCTAAATTCCCAGGATTATCTGGCCACGCACATTGAGACGGTGCACAACAAGGTCGCCCAGATTGGCAAGGTGCTGAAGTATCCGTGCCCGAAATGCGAGCGCACCTTCAGCAGCGAGAGGCGTTTGGGTAATCATTTGCTGAAGCATGACACGGATCAGTTGGAGCACAGTTGCCACATATGCCACAAGAGTTTTGCGAATGTGCATCGACTGCGTCGGCATATACAGTCGATCCATGAGGATGTGCATCCGCATGTCTGCGACATTTGTGGCAAGAAGTTCAAGTTTAAGCCATCGTTCGAGCGCCACTTGCTGGAACATCAGGGCGTCGTCGCACCAGCAATGGAGTGCTCCGTCTGCGGTGTCTGGCTGAAGAACGAGCATAGTCTGCGTCTGCATCGATTTACCCACGATAGCACCGATACCGTCTGTCCCCATTGCTCTAAGACGTGCAGTTCGCGGACAGCGTTGCGCGCCCATGTTAAATATGCTCACAAACTGACCACAAATCTGCAGTGCACTTACTGCGAGAAGAGTTTCAAGCAGCAGCGCAACCTCGAGGAGCACATGGCGATACACACCGGCCTCCAGCTATACAATTGCCCTCACTGTCCCAAGGAGTGCAGGTCGCGCTCCAACATGTATGTCCACATCAAGCAGAGGCATGCGGACGAGTGGCTCAAAGCCAAAATGGCACGCTCCCACAATCCGCAGTTTAAGCCGCATGCCTAA
- Protein Sequence
- MICRLCLKSINANNAVYLFETSDTLAESSLLKIIAKFLQLEIMPDDNISTNICHDCCEHLEDFNNFWQLVEQKQLTLKKEFLNVDVDCVALKWTGGIDVDVNIDELPLVTDEMDEKPLDIHNLSLLGSVLDVNVDSVEVPQLHAAPKHLHNPDQLLPLHAFNPDDADDDDNVDDVDVDEKPIMNESSDSTPHTSSDDDDEVPLVKLKHKLKPKRKGRVVARNEQRRLTLAQELNQLLDDTDTGCDNDNDGDGDGVNRGTRKQRNTNRNTNTNNNAPTDTQQSELQAAMERKPKGCSRAQLSKRYEEAIASYMNADCDLCDFSTKYLSQLKVHFLEVHQRDAYLKCCNKVFNRASKLMDHIRKHINPKLFTCSICNKSLNSQDYLATHIETVHNKVAQIGKVLKYPCPKCERTFSSERRLGNHLLKHDTDQLEHSCHICHKSFANVHRLRRHIQSIHEDVHPHVCDICGKKFKFKPSFERHLLEHQGVVAPAMECSVCGVWLKNEHSLRLHRFTHDSTDTVCPHCSKTCSSRTALRAHVKYAHKLTTNLQCTYCEKSFKQQRNLEEHMAIHTGLQLYNCPHCPKECRSRSNMYVHIKQRHADEWLKAKMARSHNPQFKPHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00610817;
- 90% Identity
- iTF_00553200;
- 80% Identity
- -