Basic Information

Insect: Drosophila atripex
Gene Symbol: lov
Assembly: GCA_035045925.1
Location: JAWNOP010000052.1:495665-503476[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 0.19 2.6e+02 1.4 0.0 22 41 282 303 272 306 0.84

2 2 1.3e-18 1.9e-15 56.3 0.0 1 44 795 838 795 839 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	0.19	2.6e+02	1.4	0.0	22	41	282	303	272	306	0.84
2	2	1.3e-18	1.9e-15	56.3	0.0	1	44	795	838	795	839	0.96

Sequence Information

Coding Sequence: ATGTTAAAGGACGCCGACCAGGAGCCGATTAAACGCCGCCAACTGACGTCGCTCCCCATGACCGACTTCGCCCGCCAGGTGGCGCCGCCCATCCAGCTGCCACTACCGCTTCCGTTGCCGCTCAacctgccgctgccgctgccctTGCCCCTCCTGGCCAAAGCCCCCGGCAGTGACCACGCCCCAATGCACTCCACACCACCTACGACGCCACCCACGCCACCCCCGCTGCCGCTCAACATGAGCCAGACGAAGACGGCCGAGGCCAGCGGTGGCCGACAGAGTCCACCGGCCACGCCACCCTCCTCGGGGGCGGCTATGGCCCATGCCAGCTCCGGGCCGCAGGACCACTACAGCCTGCGGTGGAACAACCATCAGAATCACATTCTGCGAGCCTTTGACGCCCTGCTACAGACCAAGACTCTGGTGGACGTGACCCTGGTGTGCGCGGAGACCTCCATCCGGGCCCACAAGATGGTGCTCTCCGCCTGCTCCCCCTTCTTCCAGCGGGTGTTCGCCGAGACGCCCTGCAAACACCCCGTGATCGTGCTTAAGGACTTCCGCGGCTGGGTAGTCCAGGCCATCGTGGACTTCATGTACCGCGGCGAGATCAGTGTACCCCAGCAGAGGCTCCAGACGCTCATCCAGGCCGGGGAGTCGCTGCAAGTGCGCGGTCTAGTAGAGAGCTCCGTGCCGGAGCACACACCGACCCCCGCCGCCTCGCCCGATGACTTCGGCATGCTCGACACATCCATGCTCTCCTCCAGCTTCGAGGAGGACGGCCCTCCCTCAATGGTTCGCCCGTCGGCAGCGTCCGCTGGCAAGCAACTGATGATGCCTTCCGCCGCGCGTATGTTCGGCAGCCATCACTCCACCTTGCTGAGCCTGCGCCGCAAGAgggaacaggagcaggaactGGAAAGTGACCAGGAGTTGGGGGGCAGCTCTCCGATGCCCCGACGAAAGCAGGCAAGACCCCGTCGTCGATCCGGGGACGTGCCCCATGACTTCGCCCTCGGCCCCAGCAAATCGGGGACCGAATCGCTTCAGACTGTGATTAAGCACGAGCTGCTGGAACGGACAGAGAGCAATCAGGAGGACGAGGACCAGGACACCGAGGCACGAAGGAACGACTCTGCGGCAACGGACACCTCTGAAGAAGAGGTCAAGGACAAGTCCGCAGATCAGCCTCAAAATGTGAATGATTGTCGCCACCACCGACTAGATCTTgatgacgacgaggaggaggagggaatCCAGGATCGAGATGACCCGAAGGTGGAACAGGAGGAGGAACAGGACATTGAAGAGCTTATTCACACGACCAACGAGCTGAGGCGACAGGCTGCCGCGGCTGCTGCCAACGCGGCGGCTGCCATGTCGCCCACCCCCTCGCCCTGTCCCAGCGACGGGCCAGAGGATCTCTGCACCACCAAGAAGGACAAGAAGGACAGGAGCAGCCACTCCACGGCCGCTCCTTCGTCCGACTGCGAgtcaaacaacaacaacagcagcaagcTGCAGGATAACAACCAGCGCATTATGCTGTCCCTGAAAGACATCCGCCAACTGAACGCCAATCTGAACGCCGGCCAAAACACTTCGACCAGTGGCCCAGGATCGGGCTGCAACAATAACGGCCTGTTGAACTTCCCCCCTCCGGGAATGCGACCTCCCGGACTTCCGGACAGTCCGCCCTGTCACATGGAAGCCTTGGAGGCGCAGATGcacgccgccgccgccgctgccgcagcAGCCGCGGCTGGCGACCATCCCTTCCACCACATGGAGCATCAGATGGAGATGTCCCTGGCCGCGGCCGCTGCAGCAGCCGCGATGCACCAGAGAGAGCCACGGGATCCCCGCGATCCTCGCGACCACAACGCATTCGCCAGCAACTTGCTGGGGCCCATGGGTATGTCTCCGTTCGGCGGACCCAATGGAGGAGGACCATCGGGCCACAACTCCGGCCCAGCAAGTGGCGGATGTCCTGGACAGGCGCCGCACGAGAGACTCGAGGAGAGCATGAACCGGCTGAGCAAGGAGCTGGGCAAGGACTTCGGCAAGGACTTCGCCCCCACATCGCCCATGAGTCTGCCGGGGCACTTCAATCCGCCGGATGGACCACCTCATCCGCCTTCACCGCTGCCCTTTCCTGGCATGTCCTCGGCGATGACGCTGACGCCGCCTCACATGTTCGGCCTGGACTCCCCACTCGGACTGTTCCCGCCCGGAATCGATCCTGGCAAGCTCTACAACCCGCTGATGGAAATGAGCGATCCGCGGGAAATGCCTGGCGGACCGCCGCCGTTCCTCAAGAAGAAAATGCCCCGACCCAAGGGACAGCACTCCGCGCCTCGAGGTGGTCCCCCCCGCTCTTGGACGAACACAGAGCTGACGGAAGCGCTCCAGCACGTGTGGAACAAGAAGATGACCACGTCGCAGGCCTCGCGCATCTTCGGAATTCCCTACAACTCTCTCCTGATGTACGTGCGGGGGAAGTACGGCAAGAGCCTCAAGCTGGAGCAACTGCGCAAGGACTGCATTAGCGGGCCGCCCATTGAGATGCTCCAGATGGGCATCAGTGGGGGTGggggcagcggcagtggcggcagcaGCTCCGGCAAGAGCGAGAAGAGCAAGgagcgcaaggagaaggacaaGGATAAGAGCTCCTCGGGCAGCCACAACAACTCCGGTGGCTCGGGCAACTCATCTTCGGGTGGTCCAAGCTCCGGAAACGGACCCCATCATGGCGAAATGGGGCCACTGGGCTCCCTCGACTTGGAGCTGGGCTTGCCACTGGGACCACCGGGCGGACCGCGAAGCGCCAGCTCAGAGCCCGACCTGCTAGGCGGGCCCAACGCCCTCTTTAACCCCTTTAACCCCCAGGGTTTCTATCCTGACTTTGCCGGTGGCTTCCCCGGGCTGCCCCTTAGCATGCTGAACCTGCTGCCACCGGCGGAGCGACACCATGCGGCGGCCGCCATGCACCACCTGGGTGTCACCATGGACGAGGACTGCAAGTCGGTGGGCTCCAAGCAGTCGTCCTCGCTAGACGACGACTTCCCGGGCTCCGGGCTACCTCTGTCGCTGGAACAGAGACGGGACTTGGGGGCGAATGGACCGCCGCCGGTGGCGCAGTCTAACGGGGGCGCTGGACAAGATTGA
Protein Sequence: MLKDADQEPIKRRQLTSLPMTDFARQVAPPIQLPLPLPLPLNLPLPLPLPLLAKAPGSDHAPMHSTPPTTPPTPPPLPLNMSQTKTAEASGGRQSPPATPPSSGAAMAHASSGPQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFGMLDTSMLSSSFEEDGPPSMVRPSAASAGKQLMMPSAARMFGSHHSTLLSLRRKREQEQELESDQELGGSSPMPRRKQARPRRRSGDVPHDFALGPSKSGTESLQTVIKHELLERTESNQEDEDQDTEARRNDSAATDTSEEEVKDKSADQPQNVNDCRHHRLDLDDDEEEEGIQDRDDPKVEQEEEQDIEELIHTTNELRRQAAAAAANAAAAMSPTPSPCPSDGPEDLCTTKKDKKDRSSHSTAAPSSDCESNNNNSSKLQDNNQRIMLSLKDIRQLNANLNAGQNTSTSGPGSGCNNNGLLNFPPPGMRPPGLPDSPPCHMEALEAQMHAAAAAAAAAAAGDHPFHHMEHQMEMSLAAAAAAAAMHQREPRDPRDPRDHNAFASNLLGPMGMSPFGGPNGGGPSGHNSGPASGGCPGQAPHERLEESMNRLSKELGKDFGKDFAPTSPMSLPGHFNPPDGPPHPPSPLPFPGMSSAMTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPREMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGGGSGSGGSSSGKSEKSKERKEKDKDKSSSGSHNNSGGSGNSSSGGPSSGNGPHHGEMGPLGSLDLELGLPLGPPGGPRSASSEPDLLGGPNALFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPAERHHAAAAMHHLGVTMDEDCKSVGSKQSSSLDDDFPGSGLPLSLEQRRDLGANGPPPVAQSNGGAGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00605660;
90% Identity: iTF_00566173;
80% Identity: iTF_00481624;