Basic Information

Insect: Drosophila arizonae
Gene Symbol: -
Assembly: GCA_001654025.1
Location: NW:7148556-7157824[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.04 2.2 8.3 0.2 1 23 1331 1354 1331 1354 0.94

2 13 6.4 3.6e+02 1.4 0.2 1 23 1518 1540 1518 1540 0.91

3 13 0.00014 0.0081 16.0 2.7 2 23 1543 1564 1543 1564 0.97

4 13 3.1e-05 0.0018 18.1 0.2 3 23 1572 1592 1570 1592 0.98

5 13 4.6e-07 2.6e-05 23.9 4.1 2 23 1599 1620 1598 1620 0.97

6 13 4.4 2.5e+02 1.9 0.4 5 23 1633 1651 1631 1651 0.96

7 13 1.1 61 3.8 5.4 3 23 1658 1679 1656 1679 0.93

8 13 0.12 6.5 6.9 0.2 2 23 1690 1710 1689 1710 0.96

9 13 4.4e-05 0.0025 17.6 0.4 1 19 1716 1734 1716 1738 0.95

10 13 1.3e-05 0.00071 19.3 0.5 1 23 1746 1768 1746 1768 0.98

11 13 8.3e-05 0.0047 16.8 7.6 1 23 1774 1796 1774 1797 0.96

12 13 0.00016 0.009 15.9 5.9 1 23 1802 1824 1802 1824 0.98

13 13 0.023 1.3 9.1 8.2 1 23 1830 1852 1830 1853 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.04	2.2	8.3	0.2	1	23	1331	1354	1331	1354	0.94
2	13	6.4	3.6e+02	1.4	0.2	1	23	1518	1540	1518	1540	0.91
3	13	0.00014	0.0081	16.0	2.7	2	23	1543	1564	1543	1564	0.97
4	13	3.1e-05	0.0018	18.1	0.2	3	23	1572	1592	1570	1592	0.98
5	13	4.6e-07	2.6e-05	23.9	4.1	2	23	1599	1620	1598	1620	0.97
6	13	4.4	2.5e+02	1.9	0.4	5	23	1633	1651	1631	1651	0.96
7	13	1.1	61	3.8	5.4	3	23	1658	1679	1656	1679	0.93
8	13	0.12	6.5	6.9	0.2	2	23	1690	1710	1689	1710	0.96
9	13	4.4e-05	0.0025	17.6	0.4	1	19	1716	1734	1716	1738	0.95
10	13	1.3e-05	0.00071	19.3	0.5	1	23	1746	1768	1746	1768	0.98
11	13	8.3e-05	0.0047	16.8	7.6	1	23	1774	1796	1774	1797	0.96
12	13	0.00016	0.009	15.9	5.9	1	23	1802	1824	1802	1824	0.98
13	13	0.023	1.3	9.1	8.2	1	23	1830	1852	1830	1853	0.95

Sequence Information

Coding Sequence: ATGGTGGACAGTGTGCAGTGTCCCGTGTGCACCTTGTACCTGCACGCGGGCATGAATCTCTCCGATCATCTGGAGACACATCCCAAGGAACAGGTCATCAAGGCGCTGGTGCAAATGACCATTGTAAACAACAATGGCATGGGCAGCGCCCTGGCAGCAGCTTTGCTCTCAGGCGATGGCGCCACGAGCTCCACCTCATTGTCAGCCACAAATGCGGTTGATGTCAAACCAGTTGTACCAGCATCttcaccaccaccaccacctccaccagcaccaccagcaacagctgcagctgcagcggcagcggcagcaactaaatcaacaacaagcaatagcagctgcggcaacaataacaacaataacaaattgagcAATCCACCGataaaggcaataaaaaacGCGCCACCCACGACTGAGGCGCCAGCCAACACATCAAACACACCCACCACAAGCAGCGTGACCGCCATCTATTCCGACTATCGCTATGAACAGCAATCCCAGCAGACGCCAGCGGCACCAGCTGCGGTGCACGGCTTTGCACGTGGTGCCACCACGCTGGTCATACCACAGGCGccacaccagcaacaacagccgcagcagcagcagcatcagtatCTGGCCTCACAGCAGCAGGCTGCCCACTTTGCCCAccttcagcaacagcagcagcagcaacagcagccggccCTAAAGTATACCTATGCAGCtgcgctgccaccgccgccacctcTGCAGCTCTTTGCGCAGCAGACAACARCAACACAATCACATCAGAAGCCACCGCCCGCCTATGGCGCCGCCATCAGTCAAATTCGATCTCAGCATaaccaaaacaaacagcaacagcagcagcagcagcaacaacaacaaccgcagcagcagcagcaacaacagcaacaacagcagcagcagcagccacaacagcaacacataACCTTGCAACATAACATTAACCTTGCACCACCGAGTGGCAAGCATAGTAAACTCCACACGGAAATCTTCCTGAatccaccgccaccgccaccgccacagCTCACGATTCCGTCAGCATTGTCGACTGCCTCATTAAGACTGCAATATCCGCCACAGCATCAACAGTCCCTTGCAGCAGccagtagcagtagtagcagcagcagcagcagcaattatgCCGTCGCTAGCTGCGCCGCTGCTAGCTCCTCCTCGGCCTTGATGTCCTCCATTACCGTTGGGCGCGCTAGCAGCAGTCGTCAGGCAACCAATTCCCCATTCGGCGCGCTGCTGAATGCTGCGGCCCAAGCGGCCTGCGCCTCTCCCGCCTCGTCCAGTGCGTCTGTGCTGCGTTACGCCGAGTCGCCAGTGGCTCACTACTTGGAGCGGGACAACGGCGACTTCATTGTCCAAGAAACTCCCAAGCACATTGTCGAGTGCGTGGAGAAGGAGGACGGCGAATTCTCGGTGATTGAGCGGATCTATCAGTCGCCGCCCAGCGTATTGCACATACACGACGATGACGAAGACGACGAAGAGGAAAACGAAGAGGAGGACGACAAGGGtTGGGCCAACAGCGATGCTGAGGACCACCTGAAGCTGGAGGATCATGTGGAGGATGGCGACGATGAGCACGAGGATAGCCGTAGTAGAGCTTCACACAAGACCACAACGAAAAAGTCAcgcaaagcaaaggcaaatggACGGAAGCACAAAAGGGTCAACAAGCATCAGCCGGATGATGAGGATGACTTCATGAGCataggcagcagctgcgccgaGAGCGAGCatcagctggagcagcaacagcagcaggctcAGCAATCGCATGTCCCACAGGCTGCGTCTCCTGCACCTGGTCCTCTATCCACGGCGCCCTCGACGAGCAGTggagcagcggctgccgcgTCCTGCAGCACCAACTCGAACAAGTCGAAAAAGAATCGTGTGACCGTGCTCAGTGATGTGCCGCTCAATATGAACGAGTATCTGGATCTTGTGGGCAACATTGTGGCTTCCAGTCGAATTAGTGCCACGCGTCCGTTTGCCGCAGTGGCACCCATACCCTTGGTCAAAGTGGAGAAAGAGGAGCCCATGGATGACTACGATACCGTCAGGGATGAGATGCAGGCCATGGAGCAGAAGCATAGCCTGGAGCAtgccagtggcagcagcagcagcagcaacagtggccATGGCACCACGAGCGTCATCCGAAtggccagcaccagcagcgccgCTACCACTGCAAATGTGGCCAACGACGATCTCACGCAACCGCCGCCCATGAAGGTGGAGGTGGAGCCGACGGTACTGCTGCCTCAACGCTTTTCGGCGCCAGCGCAACATCGCGGGCCCAAGAAGTTAGTCATCAAGCCAAAGGCCACAGGgacggcgtcggcgtcggcaacGACCAAAAAGACTGATAacagcgctgccagcagcagcagcagcggcagcggcgccagcagcagcaacagcgccgaACCACTCAGCATATCATCGAAGGCATCCGCAGAGCCGTTGCAGATCAAGAGCGAGGCTGGGGAGCATGTCTCCAGCAGTGGCAGCATACTGGAGAAGCATTTGACCAACAGCTACGCCGCCCAGCAGGCGCGGAAGCACTCGGCTGTCAACGACGACGATGCGCGCGTGCTGCTCGAGTTTGCCAACtcgaagcagcagccgccggcGGGAAACAGCAACCAGACTACGTTCGTGGTGAACGCGGCAAGCTTCGCGTCGGCGGGCTCCGTCtttgccagcggcagcagcagtgtgCCGAAGCCAGCTAAGCCGGGCGACGAGTACATTCTGCCAGATAACAATCTAGAGGTGGATGAAATCGTGATATCCTCCTCGTCTTCCTATGCCTCCGACTCGCAGCacgatcagctgcagcagcagcagcagcagtcacatcaatcgcagcagcagccggcagcgcAGCAAGCAATACCGCTTTCGCAGCAGCCGTCCTCCTTTACAGATTTCAATTTCCTGTACCATCAGCATGGAACCCcaactgtggcagcaacaacaacgacgacggcagcagcagcaaccactgCCTCAACCTTTGCACCATTTGGCWtgcaacagcagcagcagcagcaggtgctgcAGCATCCGCAACACGGCTCGAGCGAGGCCACCAATGCCGCCACGCTAGCCTCCTCCTCCAGCAACTCCTCAGTCCTGGATCAGGATTGCTCCATGAATGCCACGTTTCGCGTGGGCAAGCAGCAATCGACAATGGCCTCATGGTATcagccacagtcgcagtcgcagtcgcagccacagccacaacccAGCACATCGCACAGCTCCAGTGTGGAGCAGTCTAGCAACTTCATTGCCGCACTTGCGGCTGTGGAGTGCTGCAGCGTGGCAGCCGTGGACAGCGATGTGAGCGAGGCCAAGTACTTGGATCTGGATGCCTGCAAGCGGGAGCAGTtaagcaatagcagcagccactTGCCCTCGGCTTCTGCATCCACCACATCCTCGTCCTTTGCGGCCGCTGCCACCGAGAGCAGCTTGGTGGGTGGCCTGGGTCTGAACATACGCACCGATGAGAAAATGCCCGCAAAGGGCGAAATCTCCGAGCAGGAGAGCAACTGTGACATTGAGAACTCATGGAGTCAATCGATGTACGGCGACTTGTCACAGCGATACTTTAGGAACCAGTTTGCGGATGGCTACAATCAGCAGCTGGCCGATTGGCGCCAAGATTACTATCCGGCGCAGGATCTcagtggccagcagcagccggagcgtGAGCAAAAGCGTTTTGATTTCAACGCTGTTGCCGCGGAGTATGCGCATACGGCGGGTCAGCTGGATGCCTCTCCGGGCTCGACTAGAAACAATCATTTGCTGGATGCACAGCCCACCActtcctcgtcgtcgtcggcatTGCTGGCTGGTCCACCAATAGCCTCGACATCGCGTGCTGCTGCCGAAGCGGAGGCTGTGGCCGCAGCCCTGGCGCAGCGGAAGCCGCCGCGTCGCAAGATCTACAAGTGCCCGCACTGTGTGGCCATCTTCGAGAAGTTGAAGGAGCGCAATGCGCACATGATTGGCGAGCACAATTATGTGCGCCAGAATCGACGCCTCATCTGCACGCAGGCTTTGGTCAATAGCACCTTGGTGGGcccgcaggagcagcaggcgcagggacaacagcagcagcaccaattGCTGCAGGCAGCGGGGCACAGCAATGCCGACATTATGCATGAGGATTCCAAGGATGGCATTGTAAAGATTAAGCAGGAGCACTGCCACGATAAGCAGGATGCCTCCGAGCAACTGCTGGGCCATTCCGAGCTGCCGGACGTTAAGGACTCCGGCTTGCTCAATGGCAGGGATGAGAACGGTCGCGATCCAGATATGAAGCCGCCGGCGGGCGTCACAGACCTGGACGAGAAGCCGGCCATACCGCCGCTGGCGATGACTACACCAGCGGCCAAGTTGGCTGCTCTGTATCGCATGCTCATTGCGTACAACGAGTCCAAGCTGGGCCAGGAGCGCAACAATCTGAGCGAGCTGGAGCAAAAGGCCATGGAGAAATCCATATTCCTATGCTACGTGTGCCGCACCGACTTCCCCTCTGTCAAGCTGTACGATGCTCATCTGACTGAGCATCCGGCCGAGTGTTTCACCTGTGGCAAGAAATTCTATCGCTGGAAGAACTTCTCGCTGCATCTCAAGCGTCACTTGGGCTGGAAGGAGTTTGGCTGCTACATCTGCGATAAAAAGTTCGTGGTGCGCAGCGCTCTGGTGGAGCACATGCGCATGCACACGGGCCAGACACCGCTCAAGTGTAAGATATGCGGCAAAAAGTTCAAGCGGTACTCGAACCTAACACAACATCGCAAGCGTCACACCAAGATCCTGGTGCGCAAGAAGGAGTATGTGTGCCACTGCGGCGAGGTGTTGCCGTCTAAGGCGCGCTTCCTGTGGCACAAGGAGACGCACGACTTGAAGCCCAAGTGCTGCCCCTATTGCTGCGATCGTTTTGTGCACGCCAATTCGCTGCGCCGGCACATTCGACTGGCCCATTCGGATAAGTTTGACTACGCTGAGCCCATGGAGTGTCCCATGTGCAAGCAGATCTTTGCCAAGACCTCGATCAAGGCGCATATGGCGACTCACTCGACAGATCCGCAGTACGATTGCGCCATTTGCAACAAGAGCTTCTCCACCAAATGGAATCTCAAGATACATTCGTGGGTGCATGCGAATCGCACAGCCAAGCCGTTCAAGTGCGAGTACTGCCCCAAGGCATTCGTGCGCGAGCTGGACTTCAAGAATCACATGAACGCCCACAAGCAGATCAAGCCGTACACATGCGAGTACTGCGGCTGCAAGTTCATACGCAAGTACAACTATATGCGGCATCGGCGGGAGCATCACGGCAACAAGAAGTTCACCTGCGACCAGTGCGACAAGTCTTTCCATCGGCATTATTATCTGATTGAGCATCGACGCATCCACACGGGCGAGCGTCCGTTCCACTGCACCATCTGTGGCAAGAGCTCGACGACAAAGACCAATCACAATAAGCATCTGAAGATACATCATTCACGGGATCCATTCACCGTGGAggtttaa
Protein Sequence: MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVNNNGMGSALAAALLSGDGATSSTSLSATNAVDVKPVVPASSPPPPPPPAPPATAAAAAAAAATKSTTSNSSCGNNNNNNKLSNPPIKAIKNAPPTTEAPANTSNTPTTSSVTAIYSDYRYEQQSQQTPAAPAAVHGFARGATTLVIPQAPHQQQQPQQQQHQYLASQQQAAHFAHLQQQQQQQQQPALKYTYAAALPPPPPLQLFAQQTTXTQSHQKPPPAYGAAISQIRSQHNQNKQQQQQQQQQQQPQQQQQQQQQQQQQQPQQQHITLQHNINLAPPSGKHSKLHTEIFLNPPPPPPPQLTIPSALSTASLRLQYPPQHQQSLAAASSSSSSSSSSNYAVASCAAASSSSALMSSITVGRASSSRQATNSPFGALLNAAAQAACASPASSSASVLRYAESPVAHYLERDNGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDDEEENEEEDDKGWANSDAEDHLKLEDHVEDGDDEHEDSRSRASHKTTTKKSRKAKANGRKHKRVNKHQPDDEDDFMSIGSSCAESEHQLEQQQQQAQQSHVPQAASPAPGPLSTAPSTSSGAAAAASCSTNSNKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRISATRPFAAVAPIPLVKVEKEEPMDDYDTVRDEMQAMEQKHSLEHASGSSSSSNSGHGTTSVIRMASTSSAATTANVANDDLTQPPPMKVEVEPTVLLPQRFSAPAQHRGPKKLVIKPKATGTASASATTKKTDNSAASSSSSGSGASSSNSAEPLSISSKASAEPLQIKSEAGEHVSSSGSILEKHLTNSYAAQQARKHSAVNDDDARVLLEFANSKQQPPAGNSNQTTFVVNAASFASAGSVFASGSSSVPKPAKPGDEYILPDNNLEVDEIVISSSSSYASDSQHDQLQQQQQQSHQSQQQPAAQQAIPLSQQPSSFTDFNFLYHQHGTPTVAATTTTTAAAATTASTFAPFGXQQQQQQQVLQHPQHGSSEATNAATLASSSSNSSVLDQDCSMNATFRVGKQQSTMASWYQPQSQSQSQPQPQPSTSHSSSVEQSSNFIAALAAVECCSVAAVDSDVSEAKYLDLDACKREQLSNSSSHLPSASASTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDLSQRYFRNQFADGYNQQLADWRQDYYPAQDLSGQQQPEREQKRFDFNAVAAEYAHTAGQLDASPGSTRNNHLLDAQPTTSSSSSALLAGPPIASTSRAAAEAEAVAAALAQRKPPRRKIYKCPHCVAIFEKLKERNAHMIGEHNYVRQNRRLICTQALVNSTLVGPQEQQAQGQQQQHQLLQAAGHSNADIMHEDSKDGIVKIKQEHCHDKQDASEQLLGHSELPDVKDSGLLNGRDENGRDPDMKPPAGVTDLDEKPAIPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYICDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKILVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00516419;
90% Identity: iTF_00544682;
80% Identity: -