Dara009216.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila arawakana
Gene Symbol
lov
Assembly
GCA_018151165.1
Location
JAECWX010000031.1:4560117-4570081[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9e-19 1.8e-15 56.2 0.0 1 44 884 927 884 928 0.96

Sequence Information

Coding Sequence
ATGTTAAAGGACGCCGAGGAGCTGATAAAACGCTGCAAACTGACGACGCTGCCGCTGGCACTGCATATGAACGAGTACGGCCGCCAGGTGGCGTCAGCGCCGCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAACACCGAGCATGGATCATCATCATCATCAGTTGGGACATCATCAGCTGGGACACCACCATCATCATCAGCATCATCAATTGCCGCTACCTTCGCACAGCCACGCCCATCCGACAATGCATGCCACACCGCCCACAACACCGCCCACTCCTCCGCCGTTACCGCTGAACATGAGTCAAACGGCGACAACGGCCGCAACTACAACGGAGGCAACTGCCGCCACAGCAACAGCGGCAGCAATAACAACAACAACAGCAACGACTACAATCACCGCTGCCCACAGTCCACCTGCCACGCCCACTGGCATTGGCAGCGCACCGGTGGTAGCACAAGATCACTACAGTCTGCGCTGGAATAACCATCAGAACCACATCCTGCGCGCCTTTGATGCTCTGCTGCAAACCAAGACGTTGGTGGATGTGACCTTGGTCTGTGCCGAGACCTCGATTCGTGCCCACAAAATGGTGCTCTCCGCCTGCTCGCCCTTCTTTCAGCGCGTCTTCGCTGATACGCCCTGCAAGCATCCGGTCATTGTCCTCAAGGACTTCCGCGGCTGGGTCGTCCAGGCAATTGTCGACTTTATGTACCGCGGCGAGATCAGCGTGCCCCAGCACCGGCTGCAGACCCTCATCCAGGCCGGTGAGTCGCTGCAGGTGCGTGGGCTCGTCGAGAGCTCGGTGCCGGAGCACACTCCCACACCCACGCCCACACCAGCCGCCTCCCCTGATGACTTTCATCTGCAGGACTCCTCACTGCTCTCCTCCAGCTTCGAGGATGAGTCGCCCTCCATGGTGAGACCAGCGGCGGGCAAACTGATCATGCCTTCACGTCTCTTTGGCAACCCACTTAGTCTGCGGCGGAAGCGGGAGCAGGAGTGTGAGCGTGAGCAGGAGAGTGATCAGGAGTTGGGAGGCAGCTCACCCATGCCACGACGCAAACAGGCACGTCCAAGACGCCGATCCGGAGATGTGCCTCATGACTTTGCGCTTAACAAACCAGAAGCGACAGCGGCTCCTCCAATGGAAACGCTGCAAACTGTGATCAAGCACGAGCTACGCGACGAGCAGGAGCCTAGCGAGAAGCGTCCGAATGATGAGGACAGTCCCATGGAAGAGGAGAATCAACAGCAGACACAGAAATCCCCCAATTCCGATGCAGAGATCGTGGAAACCGAACCGCAGGAGAGGAAGGCTTTAAACCGAGGTGAGAGCAGCAATCAACAAGAGCTCGACGAGGATGATGACGAGGATCAGGAGCATGAACAAGATGCAGAGCCCGATCAGGAGGAAAACGATCACGAGGCCGATAACGATCACGATCATGATCCTGATCGGGAGCAGGATGAGGATGAAGACGAGCAGGACATTGAGGAGCTTATACACACGACCAACGAGTTGCGTCGTCAGGCGGCTGTGGCCGCTGCCAATGCGGCTGCCATGTCACCCTGTCCCAGCGACGGACCCGAGGACCTCTGTACCACCAAGAAGGACAAGGAGACGAGCAGCAACTCGCACTCCTCCGACGGCGAAAGCAACAACAACAATAACAACAGCAGTAAACTGCAGGACAACAATCAGCGCATCATGTTGTCCCTAAAGGACATCCGACAGCTCAATGCCAAGCCGAATGCCACCTCGACACCCAATCACACGCCCACCTCCTGTGCGCCCGGCAACAACGGCCTGCTCTCCTTTCCCCCGCCCGGCATGCGTCCCCCTGGCCTGCCCGACAGTCCGCCCTGCCACATGGAGGCACTGGAGGCCCAGATGCATGCCGCTGCCGTGGCCGCAGTAGCCGCTGCTGGCGCCGGTGAGCATCCCTTCCACCACATGGAGCATCAGATGGAAATGTCCCTCGCTGCTGCCGCCGCAGCGGCTGCCATGCATCAGCGGGATCCGCGTGATCCCCGCGAGACGCGTGAGCAGGCAATGCAGCGGGAGCACAATGCATTTGCCAGCAATCTGCTGGGTCCAATGGGGTTGCCACCCTTTGGAGGACACAACGGAGTGCCGGGCTCGGGGTGTGCGCCAGGGCAGGCACCGCACGAGCGTCTGGAGGAAAGCATGAACCGGTTGAGCAAGGAGTTTGGGAAGGAGTTTGGCAAGGAATTCGGCAAGGAGTTCGGCAAAGACTTTGGCAAGGATTTCTGCAAAGATTTCGCACCCACATCGCCCATGAGCTTGCCTGGACACTTTAATGCGCCTGATGGCCAGCCACATCCGCCATCGCCGCTGAACTTTCCCGGCATGTCCTCGGCGTTGACGCTAACGCCGCCACACATGTTTGGCTTGGATTCGCCACTGGGTTTATTTCCTCCCGGCATCGATCCTGGCAAACTCTACAATCCGCTAATGGAAATGAGCGATCCACGCGATATGCCCGGCGGTCCGCCCCCGTTTCTTAAAAAGAAAATGCCACGCCCCAAAGGACAACACTCGGCGCCACGCGGTGGACCACCACGTTCGTGGACTAACACAGAGCTAACGGAGGCACTGCAGCATGTGTGGAACAAGAAGATGACCACGTCACAGGCATCCCGCATCTTTGGCATACCCTACAATTCACTGCTCATGTATGTGCGAGGCAAATACGGCAAGAGCCTGAAACTGGAGCAGCTGCGCAAGGACTGCATCAGTGGTCCACCGATTGAGATGCTCCAGATGGGCATCAGTGGAGGTGGTGGCGGCAGTTCCAAGAGCGAGAAGAAGGAGCGCAAGGAAAAGGACAAGGACAAGAATGGATCGGGTTCGAATGCCAATTCCAGTGGTAACAACAGTTCATCCTGTAATCCAAGTGCCAGCGGTGGTGGTCCAACATCCATGCCGCATCCCAACGATCTGGGACCGTTGGGTCCACTCGATCTGGAGTTGGGTCTGCCACTGGGTCCTCCAGCGGGACCACGCAGCGGCAGCTCTGAGCCAGATCTGCTTGGCGGACCCAATGCGCTTTTCAATCCCTTCAATCCTCAAGGCTTCTATCCTGATTTTGCCGGCGGCTTTCCGGGTCTGCCGCTCAGCATGCTGAATCTGCTGCCGCCCGCGGAGCGCCATCATGCGGCGGTTGCTATGCACCACTTGGGCGTTAGCATGGACGAGGACTGCAAGTCGGTGGGCTCCAAACAATCCTCCTCACTGGACGATGACTTTGCTGCCGCGGGACTGCCACTCGCTCTGGAGCAGCGGCGGCACAGCGAGATGTCCAGCAATGGAACGCCACTGGCCCAGGCGAATGGAGGTGCGCAGGATTGA
Protein Sequence
MLKDAEELIKRCKLTTLPLALHMNEYGRQVASAPLXXXXXXXXXXXXXXXXXXXXXXXXXTTPSMDHHHHQLGHHQLGHHHHHQHHQLPLPSHSHAHPTMHATPPTTPPTPPPLPLNMSQTATTAATTTEATAATATAAAITTTTATTTITAAHSPPATPTGIGSAPVVAQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFADTPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQHRLQTLIQAGESLQVRGLVESSVPEHTPTPTPTPAASPDDFHLQDSSLLSSSFEDESPSMVRPAAGKLIMPSRLFGNPLSLRRKREQECEREQESDQELGGSSPMPRRKQARPRRRSGDVPHDFALNKPEATAAPPMETLQTVIKHELRDEQEPSEKRPNDEDSPMEEENQQQTQKSPNSDAEIVETEPQERKALNRGESSNQQELDEDDDEDQEHEQDAEPDQEENDHEADNDHDHDPDREQDEDEDEQDIEELIHTTNELRRQAAVAAANAAAMSPCPSDGPEDLCTTKKDKETSSNSHSSDGESNNNNNNSSKLQDNNQRIMLSLKDIRQLNAKPNATSTPNHTPTSCAPGNNGLLSFPPPGMRPPGLPDSPPCHMEALEAQMHAAAVAAVAAAGAGEHPFHHMEHQMEMSLAAAAAAAAMHQRDPRDPRETREQAMQREHNAFASNLLGPMGLPPFGGHNGVPGSGCAPGQAPHERLEESMNRLSKEFGKEFGKEFGKEFGKDFGKDFCKDFAPTSPMSLPGHFNAPDGQPHPPSPLNFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGGGGSSKSEKKERKEKDKDKNGSGSNANSSGNNSSSCNPSASGGGPTSMPHPNDLGPLGPLDLELGLPLGPPAGPRSGSSEPDLLGGPNALFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPAERHHAAVAMHHLGVSMDEDCKSVGSKQSSSLDDDFAAAGLPLALEQRRHSEMSSNGTPLAQANGGAQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00534666;
90% Identity
iTF_00470959;
80% Identity
iTF_00478814;