Basic Information

Insect: Drosophila anomelani
Gene Symbol: -
Assembly: GCA_035045905.1
Location: JAWNOO010000165.1:7442763-7444367[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3.6e-16 5.2e-13 48.8 0.0 2 45 344 387 343 387 0.95

2 3 0.088 1.3e+02 2.7 0.0 28 37 417 426 416 431 0.90

3 3 1.1e-19 1.6e-16 60.0 0.0 2 42 453 493 452 495 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3.6e-16	5.2e-13	48.8	2	45	344	387	343	387	0.95
2	3	0.088	1.3e+02	2.7	28	37	417	426	416	431	0.90
3	3	1.1e-19	1.6e-16	60.0	2	42	453	493	452	495	0.95

Sequence Information

Coding Sequence: atgAATCATTTGAAGTGGATGGGCCACTCCACCACTCTAATGGAGATACAGCGAACGCTGCGCAACGACAACCAGACCTGCGAGGTGGTCCTGGCCTCCAGGGACGGTACTAGGGTGCGCGCCCATCTCTTCGTGCTGAGCACCTGCAGCGACCTGATGCGCAACATCCTGGTGGACGTGCCGCCCGGCCAGGAGGCCACCATCATCCTGCCCGACATACGCGGTGAGCTGCTCGAGAGCATGATGTCGTTCATCTACATGGGCGAAACGAGCCTGTCGTCCGCCTCCCTGTCTGAGTTCCTCGAAGCCATCAATCTGCTTGGCATCAAGTCGGCCATTAGTTTCGAGTGCAACCCAACCGTCAGTTCGCCCAGCGTCGATCCAGACAACGGATCGCTGGCCGTGGAGACGGCCAAGTCCATAACTGGCCTCCAGATCGCCCAGGCTGAACTGCTGGACGAGGGGGAGGAGGATGAGGGCGAGCAGCCAATGGTTACCGTGCCGACCACCGTTTTAGCCGAGCCCAGTCGCCCGCTGGAGTACCTAGACGTGTATGATGCACCGAAGATCACTTACTCGATCGAGCACATGGACGGCAACACGAGCGGAAGCCAGTTCATTCTCACCGAGAACACTGGCACCTTCACCATCACTCAGTCCGCATCCGGTTTGTCGAAGATAGAGTCCCAAGGTGACGCGCAGCAGAACGCCGAGTTGGTGGATGAGGATGTGGAGGAGGACATACCCGATGAGCCTGAAGAGCCAGACACACAGTTAATGGAGGAGGAGTACGCTGCCGATCCGCTGATTGAGCTAAACACTGCCGCCGAAatggacgacgacgacaacctGCAAGAAGATCTAGTGGACGATGAGGATATCCTGGACATTAAGCCACGCAAGCTGGGCGGCGGAGGAAAGCCGCGAGTACGCCGTCCGCTCAATCCGAAGGCCGTCAAGCGACTGCCTGCCAAGCCCCATCGACAAGAACAGTATGGATCGCTTAAGCGCGAGGTTAAGGATGATATCAACGACGCCTTGGACCTCGCAGCGGACGCTGTGATCCTGGAGGGACTGAGTCTACAGAAGGCTGCCGACCGCTTCGATATCTCCAAGACGGTCCTGTGGCGTCGCGTGCGCACCAATCCCGCCTATATGCGCAGCAATCGCGAAAGACCATCGCTTCTGGAGGCCTACGAACGCCTAAAGAACGGCGACTCCTTGAAGAACATTAGCCAGGATCTCCGCATACCCATGTCCACGCTGCACCGTCACAAGGTGCGTCTGTCGGCCCAGGGCCGCCTGCCAACCTTTGTCTCCTGCCGCCGACGGGATACGACGCCAAAGGACGAGCTGCGCGATAAGCTGGCCAAGGCGGTGCATGCCTGCGTCAACGAGGGCATGTCGCAGAACCACGCAGCCAACCTGTTCGAGATCCCCAAGAGCACGCTCTGGCGCCACCTGCAGCGACGGATGGCGAACGAGGATCACAAGGTTAAGAAGGAAATGCACGAAGAGTACGACGAATTGCTAAACTAG
Protein Sequence: MNHLKWMGHSTTLMEIQRTLRNDNQTCEVVLASRDGTRVRAHLFVLSTCSDLMRNILVDVPPGQEATIILPDIRGELLESMMSFIYMGETSLSSASLSEFLEAINLLGIKSAISFECNPTVSSPSVDPDNGSLAVETAKSITGLQIAQAELLDEGEEDEGEQPMVTVPTTVLAEPSRPLEYLDVYDAPKITYSIEHMDGNTSGSQFILTENTGTFTITQSASGLSKIESQGDAQQNAELVDEDVEEDIPDEPEEPDTQLMEEEYAADPLIELNTAAEMDDDDNLQEDLVDDEDILDIKPRKLGGGGKPRVRRPLNPKAVKRLPAKPHRQEQYGSLKREVKDDINDALDLAADAVILEGLSLQKAADRFDISKTVLWRRVRTNPAYMRSNRERPSLLEAYERLKNGDSLKNISQDLRIPMSTLHRHKVRLSAQGRLPTFVSCRRRDTTPKDELRDKLAKAVHACVNEGMSQNHAANLFEIPKSTLWRHLQRRMANEDHKVKKEMHEEYDELLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00594467;
90% Identity: iTF_00488768;
80% Identity: iTF_00478119;