Basic Information

Insect: Drosophila anceps
Gene Symbol: stc
Assembly: GCA_035045945.1
Location: JAWNON010000196.1:3919119-3922613[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.5 1.3e+04 -3.7 0.5 15 18 379 382 378 383 0.79

2 15 2 1.8e+04 -4.1 1.6 15 19 406 410 405 410 0.81

3 15 0.057 5.2e+02 0.8 2.0 4 11 439 446 438 447 0.90

4 15 6e-07 0.0054 16.7 15.1 1 19 451 468 451 468 0.93

5 15 1.7 1.6e+04 -3.9 0.9 6 10 494 498 493 498 0.88

6 15 2.3e-08 0.00021 21.3 13.6 1 18 504 521 504 522 0.98

7 15 1.7 1.6e+04 -3.9 1.5 7 13 526 532 526 533 0.75

8 15 2e-09 1.9e-05 24.6 12.9 1 19 562 580 562 580 0.98

9 15 2.4e-05 0.22 11.6 17.0 4 19 628 643 621 643 0.88

10 15 0.06 5.5e+02 0.8 11.6 1 11 683 693 683 705 0.79

11 15 2.9e-10 2.6e-06 27.4 15.1 1 18 710 727 710 728 0.97

12 15 2 1.8e+04 -4.4 1.2 6 10 757 761 757 761 0.88

13 15 2 1.8e+04 -7.1 9.2 10 18 775 784 765 785 0.77

14 15 4.8e-08 0.00044 20.2 11.3 1 16 821 836 821 843 0.95

15 15 4.7e-08 0.00043 20.3 13.2 1 19 853 872 853 872 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.5	1.3e+04	-3.7	0.5	15	18	379	382	378	383	0.79
2	15	2	1.8e+04	-4.1	1.6	15	19	406	410	405	410	0.81
3	15	0.057	5.2e+02	0.8	2.0	4	11	439	446	438	447	0.90
4	15	6e-07	0.0054	16.7	15.1	1	19	451	468	451	468	0.93
5	15	1.7	1.6e+04	-3.9	0.9	6	10	494	498	493	498	0.88
6	15	2.3e-08	0.00021	21.3	13.6	1	18	504	521	504	522	0.98
7	15	1.7	1.6e+04	-3.9	1.5	7	13	526	532	526	533	0.75
8	15	2e-09	1.9e-05	24.6	12.9	1	19	562	580	562	580	0.98
9	15	2.4e-05	0.22	11.6	17.0	4	19	628	643	621	643	0.88
10	15	0.06	5.5e+02	0.8	11.6	1	11	683	693	683	705	0.79
11	15	2.9e-10	2.6e-06	27.4	15.1	1	18	710	727	710	728	0.97
12	15	2	1.8e+04	-4.4	1.2	6	10	757	761	757	761	0.88
13	15	2	1.8e+04	-7.1	9.2	10	18	775	784	765	785	0.77
14	15	4.8e-08	0.00044	20.2	11.3	1	16	821	836	821	843	0.95
15	15	4.7e-08	0.00043	20.3	13.2	1	19	853	872	853	872	0.96

Sequence Information

Coding Sequence: ATGGCCGAgtattggcagcagcagcaacagcaccagcaccagcaccagcaccagcagcaccagcaacagcagctgcagcagcaacagcagcagcagctgccccaGCAAACAAATGGAGCTGGAGATTCCGCAGGCTTGAACACAGCCAATGgccacaataataataataattatgtaaattttaatcaatttatcaGTCAACACAATTTGGCCAGCTCCTCCTACAatgttggcggcggcggcggtgcctTCGGCTTAacgcccagcagcagcgctgccagcagcgGCTCCAATTTATATACGCCAACCTTTTATGGCAGTCAAAATGGCGACTGTTACAATGCAGCTGGCGGAGCTGTTGCCTATCCAGTTGCCTATGCAAATCCTTATACATCCTTTGGCCCAAATCCATttgctgcttctactgcttCATCGACCGGTTACGATTTCAGCGCTTCCAAGCTGCAGGCATCAGCGCCCGAATTCGTGCCGAATTTTGCTAAGCTCAgtttggcagcaacagcagaaataGCACCAGCTACAGAAAATGCCTCTGTTAAAaatcataacaacaacaacaacaacagcaacaacaacactgccATACAGCCAAAtggagtagcagcagcagcagcgtcgacTGGAAATTCAGCACAGCAGCCACATCGAGCGGATCACAGGCAATCGAAGTCTCaaggtagcagcagcagcagtggcggcggcggcggcggtggtggtggtggtggtggtggtggtgttaaCAATAGTCGCCAGCAGCGACGCAACGATTATCGTGAGGAGCGCAATGAGGAGCGCTATGAGCGTGGCAAGAAGCCGCAGAAACAACAACGTTACGATAATCATCGCAGCAATAAGCGGCGCGATGATTGGAATCGTAATCGTGATCGCATCAATGGCTATCCACGGGCTGCCGAGGAGCTagacaccagcaacagcaatgacagTGCCCAGACCTCACCTgagaagcaacaacatcaacaaatcTCACCCAGGCGCGCACCTGATCTGGAGAAGCTGTCGCAGCGTGAGAAGCTAATGAGAGATATTGAGCAGCGCCGACTCGAGTGTCTCGTGTGTGTGGAGCTTATTAAGGCGCATCATGGCACCTGGTCGTGCCAGAACTGTTATCATGTGCTGCATTTGAAGTGCACCATCACCTGGGCAAGCAGCTCGAAGTCGAACGAGGGCTGGCGCTGTCCCGCCTGCCAAAATGTGCTGCAGGAGCTGCCGCGCGAATATCTTTGCTTTTGTGGCAAACTCAAGAATCCACCGTTGACGCGCAACGAGCTGGCCCACAGCTGTGGCGAGCTGTGCTGCCGTGTCGAGGGCTGCAGTCATGCGTGCACATTGCTCTGTCATCCGGGTCCGTGTCCGCCGTGTCAGGCGAATGTGAGTcgcagctgtggctgcggACGCACCTCCAAGCTGATGCAGTGCGCCATGAAGCAGCCACTGCAATGCGAGGCCATTTGCGATAAGCTGTTGAACTGTGGCGAGCATCGCTGTCAGCAGCCCTGCCATGCGGGCAAGTGTGAGGCGTGTGCGGAGCAAGTGCAGCAGAATTGCCATTGCGGCAAGCAGCAGCGCGAGGTGCTGTGCACCCGCGAGACTCAGGACAAGCGCAGCTATTCGTGCAAGGAGTGCTGTGGCAAGCCCCTGCCCTGTGGCAATCACAAGTGCAAGGATTCGTGTCATGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCCACGCAAATCACCAGCTGCCCATGCGGCAAGCTGCCTGTGCCGGTGTcacagcgcagcagctgcctcgATCCGGTGCCCACCTGCGAGGGCACGTGCAGCAAAACGTTGCGCTGCGGCAAGCCAGCGCATCCGCATCAATGCGCCAGCAAATGTCACCTGGGCCAATGTCCGCCCTGTCCGAAGCAAACGGCTGTGAAGTGTCGTTGCGGCCATATGGATCAGATGATCAAGTGCCGGCAGCTGTCGACACGAGCGGACGATGCGCGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGTGGCAAGCACAAATGCAACGCCGAGTGCTGCATCGATATCGATCACGCCTGCCCATTGCCCTGCAATCGCACCTTAAGCTGCGGCCGGCATAAATGTGATCAGCCCTGCCATCGTGGCAACTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGCGAGTGCGGCGCCGAGGTGATCTATCCTCCCGTGCCCTGCGGTACTAAGAAGCCCGTCTGCAAGCGTCCCTGTTCGCGCACCCATGGCTGCGAGCATGCGCCGCAGCACAATTGCCATGCGGCGGCCACCTGTCCGCCCTGCATGATGTTCACCACGAAATGGTGTCATGGCAATCACGAGCAGCGCAAGACCATACCGTGCTCCCAGGCCAGCTTCAGCTGTGGCCTTGCCTGCGGCAAGCCCCTGTCCTGCGGACGTCACAAGTGCGTACGGCCCTGTCACGAAGGCGATTGCCAGCAGGCGGGTGAACTGTGCCGCCAGAACTGCGCCAAACCGCGTCCAATGTGCGGCCACAAGTGTGCCGCTGTGTGTCATGAGGGCGACTGCCCAGAAACGCCCTGCAAGGAGCTGGTCGAAGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAATCGTAGCTGCCAGGAGCTGGCACGCGAACACAGTCGCATTGCCACCGCTCAGCTGGCATCCTCCATGGCGGAGATGTCGCGTGGCAACTACATGGAACTGAGCGAAATTCTAGCgcccaacaaaaacaacaagtcCAACAAAACCCTGGACTGCAATGAGGAGTGTCGTCTGTTGGAGCGCAATCGTCGCTTGGCTATTGGCCTGCAGTCCCGCAATCCGGATGCGCAGCTGAAGTCGCTGACCAAGTACTCGGAATTCTTGCGTGGCTTTGCCAAACGCAATCCGGTGCTGACAAAGAGCGTCTATGAAACGCTCAGCGACCTGGTCAAGCTGGCCAAGGAGAGTAAACAGAAGTCGAGAAGTCACTCCTTTCCCACCATGAACCGCGAGAAGCGTCAGCTGGTGCATGAGCTGTGCGAGGTGTTTGGCGTGGAGTCTGTCTCCTACGACAAGGAGCCCAATCGCAATGTTGTTGCCACGGCGCACAAGGAACGCTGCTGGCTGCCGGCTACGAGCATTATGGAGGTGCTGGCACGTGAATCGGGGCAACGTCGCGTGCCTGTGCCCAGCAACAATGCGTGGAGCCTCAAAAAGTAG
Protein Sequence: MAEYWQQQQQHQHQHQHQQHQQQQLQQQQQQQLPQQTNGAGDSAGLNTANGHNNNNNYVNFNQFISQHNLASSSYNVGGGGGAFGLTPSSSAASSGSNLYTPTFYGSQNGDCYNAAGGAVAYPVAYANPYTSFGPNPFAASTASSTGYDFSASKLQASAPEFVPNFAKLSLAATAEIAPATENASVKNHNNNNNNSNNNTAIQPNGVAAAAASTGNSAQQPHRADHRQSKSQGSSSSSGGGGGGGGGGGGGGVNNSRQQRRNDYREERNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAAEELDTSNSNDSAQTSPEKQQHQQISPRRAPDLEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSNEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCAMKQPLQCEAICDKLLNCGEHRCQQPCHAGKCEACAEQVQQNCHCGKQQREVLCTRETQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPVSQRSSCLDPVPTCEGTCSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCSRTHGCEHAPQHNCHAAATCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLSCGRHKCVRPCHEGDCQQAGELCRQNCAKPRPMCGHKCAAVCHEGDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLDCNEECRLLERNRRLAIGLQSRNPDAQLKSLTKYSEFLRGFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00549946;
80% Identity: -