Danc005330.2
Basic Information
- Insect
- Drosophila anceps
- Gene Symbol
- -
- Assembly
- GCA_035045945.1
- Location
- JAWNON010000073.1:6174196-6182717[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00024 0.017 15.6 3.4 1 23 297 319 297 319 0.98 2 11 0.0012 0.084 13.4 10.5 1 23 326 348 326 348 0.96 3 11 0.00012 0.0085 16.5 6.5 1 23 354 376 354 376 0.98 4 11 0.00055 0.039 14.5 1.6 1 23 382 404 382 404 0.95 5 11 2.6e-05 0.0018 18.6 0.5 1 23 410 432 410 432 0.97 6 11 1.7e-05 0.0012 19.2 0.1 1 23 438 460 438 460 0.98 7 11 0.00015 0.01 16.3 2.0 1 23 465 488 465 488 0.97 8 11 0.061 4.3 8.0 0.3 1 23 494 517 494 517 0.94 9 11 0.0002 0.014 15.9 0.1 1 23 576 598 576 598 0.98 10 11 0.018 1.3 9.7 2.7 1 23 710 732 710 732 0.95 11 11 0.0052 0.37 11.4 4.9 5 23 745 763 737 763 0.92
Sequence Information
- Coding Sequence
- ATGTGCGCTGCACAGAGCAATCCGCCGCCCTTCGGCTACACTTGGGGCTTTGCAGACAACGGCAACCGTGCCGCAGAATCAGTTTTGGAGATATCGCCAAATATTAACTACACTGTCAGTGGGGAATCGATGCCCTATCTGTTATCCACGGATGGATCATTGGCCGTACAAAAGGATGTTAAAGGTGCGCTCGCCAGCAATAAGGGCAATGTCGTGCGTCGCATGTTCGTGGTGAACGATTCCTCGTTTGCGCCCGGAACACAAAGAGTAATTACCACAGGCGCCGCATCGACGGTGGTCAAAAAACAGGACTCTGGTCAACAGGTGTTGAGCATAAATTCGCTCGATAAGAACTATCTTTTGGTCGATcaggcaacagcggcagcagctgcggctgcggcagcaggTGGAGGTGATCCGGCGACTGCTGCACACCATCATGCattggcaaatggcagcatTGTTGACACAAAAACTGGACAAACTGTATTAACCACATCGAGCGCCGCCGCTGCGGCCAAGTCGCATTTTGGCTCAATTGGTGCATTGCATCTCACCCAAGAGGAATGCAATGAGATCCTAATCAAGCGCGCCATTGCAGCCGGCCACGGCCACCACcagacgcacacactcacCGCTGGCGACGGagcccaccaccaccaccatcatcatTCGACGGCGCCGGGCGCGACACCAAGTGACATACTTCCTGGTATTTCAGTTCAAGTACAGAAAGTAATACAAGGACTCGAAGAGAACGAGGACTCGCAGGGCGACGCACCCAACTTAAAGTTGGAGCCAGGCACATTAGAATTGTCCCCAAAGACCGAACTACAGGAATCAATGCATTTCAGCGAAACCGACGCCACCATCAAAAAGGAGCGCCCGTACAGTTGTGACGAGTGCGGTAAATCCTTTCTGCTCAAACATCATTTGACAACACACGCACGCGTGCACACAGGTGGCGAACGACCACATATTTGCACCCATTGCGGAAAAAGTTTTGCGCACAAACACTGTCTGAACACGCATCTGCTGCTTCACTCGACTGATCGGCCCTATCAGTGTCAGGAGTGCAAGAAGAGCTTTACGCTTAAGCATCATCTATTGACGCATTCGCGCGTCCACAGCCGGGAACGGCCATTTGTTTGCCAGGAATGCGGACGTGCATTTCCCCTCAAACGTCATCTGGTGACGCACAGTAAATTTCACGCCGGCGAACGTCCCTATGTCTGCGAGGAATGCGGTGAAAGTTTTGCACAGGAGAACCACCTGATTATGCACTCGCGCTTTCATGGTTCATTGAATCCATTTGTTTGTGCTGATTGCGGAGCATCGTTTCCACGCAAGTTTCAATTGGTTAATCACGGTCGCATCCACGGCAAGATACCACACTCCTGCACAGTTTGTGGCAAAGAATTTCTACAGAAGCGCACACTAGTTTCCCACATGAGGCGCGTACATACCGGCGAGCAGGCGCATCCCTGCGTTAGCTGCGGCGAAGGTTTCCTCACCAAAGCAGAGCTGCACCAGCATGTGCGTGCAGCGCACAACGGCGTTAATCCCAATACGAGCAGCGCTACCATAATAGCCAATCAACAGCAGCTCCAACAGCCGCATCATCATCCCGGACATCCACAGACGATCACCGTTGTCAGCAATCCAGCTAATTCAACGCTGCTCACCGTCTCCACAACCGATGCGAATGGTGTAACGCGTCCACAGTTCGTTTGCCGTGAATGTGGCAGCGCGTTTAATAGTCGCGAGGCGCTGGCCTTGCACTTGCGATTGCATACGGGCGACAAGAGTTTGATGACCGATCTGTGCGCCTTGACAGCAGCGCTGCCTGGTCACTTCCTGAGCACGGCAAGCCTCAATCCTGGCACTGTGGTCACGGCCAATCCAAATCTGGTGGGACAGAGTCCGGTGCCGGTGCAAATCATATCATCAACCGGTCAGGTGATGTCACAGACCACGCTGGTGCAGGCCGCCAATTCGACCCATCCGCAAGCCGTTGTCACAGCCGTGCCCACAATGCCCGTCCACGGGCAACAGCATCTGCAGCAcgtccagcaacaacagcagcagcatgtggTCACCGTGTCGCCGGCCAACAAGCCTAAATCGCATTTCTGTGCCAGCTGCGGCAAAGGCTTTGCTGCCAAGCACGGTTTAATGCAGCACAATCGACGACATCCGAACGGCGGCTGCACGGTTCGCACCCATGTTTGCGAATGTGGAAAGGCGTTCTTCCAAAAGAATCATCTGATGCTGCATCAGCGCCAGCATTTGGAAACAAAGCCAGCCATATCGCAGCAACAGGAGGCCGacgtgcaacagcagcaacaagcacagGCAcaagctgcagccgctgccgccgccgccgctgcggGCCAACAACCTGCTCAGGTGGAGGTGCAAATCGTATCTAGTGGACATGGCCATGGCAAGGTCATCAAATACGAGATCTGTCGCAATGTGctgcaggaggagcagcaacaacagcagcagcagcagcagagctcCATGCACGCAGAGTAA
- Protein Sequence
- MCAAQSNPPPFGYTWGFADNGNRAAESVLEISPNINYTVSGESMPYLLSTDGSLAVQKDVKGALASNKGNVVRRMFVVNDSSFAPGTQRVITTGAASTVVKKQDSGQQVLSINSLDKNYLLVDQATAAAAAAAAAGGGDPATAAHHHALANGSIVDTKTGQTVLTTSSAAAAAKSHFGSIGALHLTQEECNEILIKRAIAAGHGHHQTHTLTAGDGAHHHHHHHSTAPGATPSDILPGISVQVQKVIQGLEENEDSQGDAPNLKLEPGTLELSPKTELQESMHFSETDATIKKERPYSCDECGKSFLLKHHLTTHARVHTGGERPHICTHCGKSFAHKHCLNTHLLLHSTDRPYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCADCGASFPRKFQLVNHGRIHGKIPHSCTVCGKEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRAAHNGVNPNTSSATIIANQQQLQQPHHHPGHPQTITVVSNPANSTLLTVSTTDANGVTRPQFVCRECGSAFNSREALALHLRLHTGDKSLMTDLCALTAALPGHFLSTASLNPGTVVTANPNLVGQSPVPVQIISSTGQVMSQTTLVQAANSTHPQAVVTAVPTMPVHGQQHLQHVQQQQQQHVVTVSPANKPKSHFCASCGKGFAAKHGLMQHNRRHPNGGCTVRTHVCECGKAFFQKNHLMLHQRQHLETKPAISQQQEADVQQQQQAQAQAAAAAAAAAAGQQPAQVEVQIVSSGHGHGKVIKYEICRNVLQEEQQQQQQQQQSSMHAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00575764;
- 90% Identity
- iTF_00803779;
- 80% Identity
- -