Basic Information

Insect: Drosophila anceps
Gene Symbol: rfx7.L
Assembly: GCA_035045945.1
Location: JAWNON010000225.1:14894569-14898875[-]

Transcription Factor Domain

TF Family: RFX
Domain: RFX domain
PFAM: PF02257
TF Group: Basic Domians group
Description: RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.9e-33 9e-29 99.9 0.1 3 78 315 390 313 391 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.9e-33	9e-29	99.9	0.1	3	78	315	390	313	391	0.97

Sequence Information

Coding Sequence: ATGTCCGAGAAGCATGGCCAGATTAGTGGTGCGCAGTGGACGGCGAAatcggcgacagcagcagcggcggcggcaacggcagcatcAGCGGGGGGCACAACTGCATCGACGTCGCTGCAGAAGCATCAGCAATCCAATCCAAATTCCAATTCCATATACGaagcaacagttgccacaaGCCCGTATGGAATATGTGGCGTGCCTGTCCCGGTGCCAGATATTCCCACCTATACGTCTGGACGGTTCCAGGCTCCACCCATTCATTTGCAAGCAGCTAAGTCATCGCCACTGACCATTGCACCGATTGTGTCGCCATCCCTGGCACTCGCCCAGTCCCAGGTGTCGCCTACACCCACAAATGTACCTGTTCCCAGCGGGGGTTTCGTGCCGCCTGCATATCCAAATGTGAATGCCCTAGGACCAGCAATCAGTACTACCACATCTGTACTCACGCCCAATCCCTTTGCAGCGGCCGCTGGCAATGCTGGTCTTGCATTTGTTAATGCCTTCAACAGCGCTCAACAATTGGACTTAGGCAAGATTATGCATGCAATGAATGCTTCTTCGGCATCAGGAACGCTTCCAACTGCGGCTATTCCAAGGCATCCACAGCCTCCACATCATCCCCACACACATCCCAGTGAAGGTGGCTCAGTTGCTGCGCCACCGGCTGCACCCAGTGGCGCAATCAATTCCACAATTGCGGAAAATGTGATGAATTCTCTAACCAGCGATGACGAACGCATGCGACGCGTCCAACAGGTCATCGAAACTAGTTTAGATGATACCGCAAGGGGACACATCGCTCAAATTCTGGAAAGTGTTGCAACGCTGAAACCTATTGAAAAACTGTTCTTGTATTTGCGTTTGCCCGGCGAGAGTGCCGATACGGATCCATTGAGACAGCCACAGAACCCACTGGGCACACGATCCGAAATTAATCACACCATCAATTGGGTGCGCTCACATCTCGAACATGATGCTCAGGTTTCCATACCAAAACAGGACGTTTACAAtgattatatCGCCTATTGTGAACGCCTGAGCATCAAGCCGCTGTCAACGGCTGACTTTGGTAAGGTAATGAAGCAGGTGTTCCCTGGGGTCCGTCCTCGACGTCTGGGCACGCGTGGCAATTCACGCTACTGCTATGCAGCTATGAGGAAGACCACAAAATTGACACCGCCACAGTTGCCCCAGCTATGCAAGGATGAACCACTTGATGACGCTAATAGAACGGAGGCCACTCCCGCACACATTAAGCTATCACCGAATGCCGCAGCGGAAGCGCATGGAGCGAAAACAGATAATGAGTGCAACTGGGATGTGGTGCGCAGCTGGGCAGAAAAGCTGCTTAACACTAAGCTAGAAAGCGTTACAGAGTTGGCCACACGGATcaagaacaacaatgcaacaatAAATGCGACATTCGCACCCAAAAAGTACACACCCAGGGAGCCCAAAGAGAAGCGATTACTTGCAGACATGGGACCCCTAAAGAAGCGTCGCAAAAAGAAACGCAAAGGCTCCACATCCTCGGAATCAAGTTGCAATCAATTGAGTGGTGCTCAAGATGCGGGAAGTAGTCAGGAAGCAGTCAGCGATGAACAGAAAACAGAACAGTTACTAAAGATCAAGCAGGAGATTATAGACTCGCCCAGTGGTTATCTGACatcccaacagcagcaacagcaggttTTGCCGATGAATTTAGCCACAGAGCCGCGCAGTAATGCAGTACGCAATCTAACGCCCAAGCTACTGGAGCTGCAGGCTGCGGTAGCAGTACAGCAGCCATTATCACCCAGTGTACTGGTCATAAAGGACGAGGCAGAAGAATATAATACAAccaatatattttgcaaaaaagTGCTAAAAGCACAGCAGACCAAAGGCTTTTGGGCCAACTCGCCCAGCAGCGCCAGTGCAACTGGCGGCACTTTACTTGTGCCTCCAGTAATaacgacaacggcagcaacaccACCACCCCTCGTACAGCCATCTGCTGAAAGCTCGCCCGCAAATGTGGCGGTGCTCTCAATGGGCCCACCAGCTCAAATGAATCATCCAAGCTCTATCAGCCCGTCAAGCAGTCTGGACACGAACACTACCACACCGAAGGTCGCGTCGCGCAACATGATGTCGCTACGGGCCAAACGCCTAATCGCAGAGAATGCAGCTGCCCTAGCCGCTGCCGCAGAGGACACTGGGCTGGCTGAGAACCTGGGTTTGCCACGTGAGCGTGTAATCAGCATATGCAATATGGATAAGCATGAGCTTGACGATTACTTTCTGCCCGGCGAAGATGAGGAAGAGAACTCTGAAGGGCCAGATACCGAGCTGCTTCAATATTTTCAGATGGGAGACGCTGAGGAAAAACAACTGAATTCCTTAGATGCTCAAGCAGAACAACACAGAAACCCACAGGCTGCCTCAGCTACTGCAATAACAAATGCAatggcaacatcaacagccagATTGGCCACGGCAACAGCGACTACAATAAAAACgacgcagcagcaattgcatcaacagcaacaacagtcgcAGATGCGTCGATTAATGCCTTTGCcaacgccagcaacaacagcggcagctacAAATGTTGTGGGTTCTGCCTCAGCGTCTCTGGCACTAATGTCACGaaagcatcaacaacaacaacaccagcagcagcaacaacaacagcaacagctgcaaaccatcagcaacaacaataacagcaataaaCGCAAAATTAGTCTAAGCAACGCGTTTagtaacggcaacaacaagaactgcATTTTTTTGCCCATTTCACCAAACatcaatagcaacagcaacaacaaagtttcagcaactacagcaccaacaccagcaccagctccagctccagctccagcaccagcacctGCACCTTTACTTGAAACACCAACAgtagcagctacaacaacaggtAAACTGACCACGCAGAACTGCTTTGCCAGTCCGGGTCTAGCATGCATGCGCCAGCGTTCCAGCCTGTTAACCAAGCAGCAATCGCTAGACTTTGACAATAACAACGGCAATGGGGATCCCATGATTGGTGCGCATAGGCGTAGACGTAGCTACGTTTACAGCTATCCCAGCAGCAGTTCTGCTTCGGCGCCACCCAGTCCCTCGCTGCTACAGCAGTGCATGGGCGTCAATTGGTCGTTTATGGGCAGCACTGGCAACACCACCCAGTTCAGCGAGAACAACgtcagcaataacaacagcaatgttGAACTGCTGGTTAACCAAAATTCCATGGATTTGGAAACAAGCCTGGCGCTAAGCGGCGCCAATATGGAGCTAAATGAAACACAACGCTCGCAATCGGTGCCATTGTCTCAGCTGcaacgcagcagcaaccagtCTCCTTCAACAGGATACAACCGCTTGCTCAACCAGGCCGTCACCACTGGCATAGTAAAAGATGCGCTCTTCTCAGAAAACAGCAATAGTCAGCAGTCGGTTGGTACATTAAAGCTTGGCGGCGGCGACGTGGATGTATCGGCAACTCTACTCTACGATGACGTGGATGTCAGTGCGCTTATATCTCCCAGCTTTAATAATAAGTTCAGCGGCATACAAACGACAACCACATGCAGCTCATCGGCAGGTTCCTCGAGTGGCTACAGCAGTGCTGGCAGTGCAGGTGGTATTGTGTCCCGCTCTGTGCCTTCCACACCGCTGCCgcatcagcagccgcagctgcagagCTGCAACAGTGGCCTTAGCAGCgtcaatggcaacggcaacactGCCAGTGGCTTCTTCAACATCTCACCAGCCTTTAATTGGGGCGCTAGCAATGTGGCCTATGGTGGTCAGTCGTACAGCTCGCGCAATCCTTTGGATATTTCCAAATCGATGCCAACGACGCCCATTACGACACCCTGTTTCCGCTACAGTCCTGTCGAGCTGCATCGCGACTTCTTGATTAACGGCAATACAATTGACAGTCTGTCGTCGCCAGCTGTGACAGCTTTCAACAGCGCCACAGATGTCGTCTTGGCGCTCAGCACCGATACGCTGATTGATGACGGCGCACCCAATAACAGCGATGTAGAGGCCATAATTGGTGCCGTCGATATACTCGACAGCTTGTAG
Protein Sequence: MSEKHGQISGAQWTAKSATAAAAAATAASAGGTTASTSLQKHQQSNPNSNSIYEATVATSPYGICGVPVPVPDIPTYTSGRFQAPPIHLQAAKSSPLTIAPIVSPSLALAQSQVSPTPTNVPVPSGGFVPPAYPNVNALGPAISTTTSVLTPNPFAAAAGNAGLAFVNAFNSAQQLDLGKIMHAMNASSASGTLPTAAIPRHPQPPHHPHTHPSEGGSVAAPPAAPSGAINSTIAENVMNSLTSDDERMRRVQQVIETSLDDTARGHIAQILESVATLKPIEKLFLYLRLPGESADTDPLRQPQNPLGTRSEINHTINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLGTRGNSRYCYAAMRKTTKLTPPQLPQLCKDEPLDDANRTEATPAHIKLSPNAAAEAHGAKTDNECNWDVVRSWAEKLLNTKLESVTELATRIKNNNATINATFAPKKYTPREPKEKRLLADMGPLKKRRKKKRKGSTSSESSCNQLSGAQDAGSSQEAVSDEQKTEQLLKIKQEIIDSPSGYLTSQQQQQQVLPMNLATEPRSNAVRNLTPKLLELQAAVAVQQPLSPSVLVIKDEAEEYNTTNIFCKKVLKAQQTKGFWANSPSSASATGGTLLVPPVITTTAATPPPLVQPSAESSPANVAVLSMGPPAQMNHPSSISPSSSLDTNTTTPKVASRNMMSLRAKRLIAENAAALAAAAEDTGLAENLGLPRERVISICNMDKHELDDYFLPGEDEEENSEGPDTELLQYFQMGDAEEKQLNSLDAQAEQHRNPQAASATAITNAMATSTARLATATATTIKTTQQQLHQQQQQSQMRRLMPLPTPATTAAATNVVGSASASLALMSRKHQQQQHQQQQQQQQQLQTISNNNNSNKRKISLSNAFSNGNNKNCIFLPISPNINSNSNNKVSATTAPTPAPAPAPAPAPAPAPLLETPTVAATTTGKLTTQNCFASPGLACMRQRSSLLTKQQSLDFDNNNGNGDPMIGAHRRRRSYVYSYPSSSSASAPPSPSLLQQCMGVNWSFMGSTGNTTQFSENNVSNNNSNVELLVNQNSMDLETSLALSGANMELNETQRSQSVPLSQLQRSSNQSPSTGYNRLLNQAVTTGIVKDALFSENSNSQQSVGTLKLGGGDVDVSATLLYDDVDVSALISPSFNNKFSGIQTTTTCSSSAGSSSGYSSAGSAGGIVSRSVPSTPLPHQQPQLQSCNSGLSSVNGNGNTASGFFNISPAFNWGASNVAYGGQSYSSRNPLDISKSMPTTPITTPCFRYSPVELHRDFLINGNTIDSLSSPAVTAFNSATDVVLALSTDTLIDDGAPNNSDVEAIIGAVDILDSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00559234;
90% Identity: iTF_00573058; iTF_00559234; iTF_00519659; iTF_00532113; iTF_00502263; iTF_00509561; iTF_00567998; iTF_00544209; iTF_00572342; iTF_00515997; iTF_00544960;
80% Identity: -