Damb010858.1
Basic Information
- Insect
- Drosophila ambigua
- Gene Symbol
- ftz-f1_1
- Assembly
- GCA_018150905.1
- Location
- JAECWS010000002.1:7776974-7788775[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3 1e+04 -4.7 1.1 40 57 25 38 5 49 0.35 2 4 5.6e-20 4.3e-16 59.1 0.7 1 79 210 287 210 308 0.76 3 4 7.2e-34 5.4e-30 104.9 1.8 157 297 424 557 408 560 0.85 4 4 8.2e-22 6.2e-18 65.1 0.0 328 408 546 626 541 628 0.96
Sequence Information
- Coding Sequence
- ATGTTATTAGAAATGGATCAGCAACAGGCGACCGTACAGTTCATATCGTCGCTGAATATATCGCCGTTCAGCATGCAACTCGAGCAGCAGCAGCAGCAGCCCTCGAGCTACCAGGACACCACCTCCTCCCACTCACAGCAGAGTGGCGGTGGGGGCGGAGGCGGTGGCGGAGCTGGCGGCAACATCCTCAACGGCAGCTCAGGCAGTAGCTCCGGCTACATGCTGCTGCCCCAAGCGGCCAGCTCCAGCGGCAATACCAATGCCGCCCACATGTCCTCCGCCAGCGGATCTGTTGGCAATGCCAGCGGCCCCAACGGTGGCGGAGGCGGTTCCGGCCCTGGCAATGCCATGGGCGGTACGAGCGCCACTCCGGGACACGGCGGCGAAGTAATCGACTTCAAGCACCTCTTCGAAGAGCTATGCCCCGTGTGCGGCGACAAAGTCAGTGGCTACCACTATGGCCTGCTCACCTGCGAGTCTTGCAAGGGCTTCTTCAAGCGGACGGTCCAGAACAAGAAGGTCTACACTTGCGTGGCGGAGCGGTCGTGCCACATTGACAAGACGCAGCGCAAACGGTGTCCGTACTGCCGATTCCAGAAATGCCTGGAGGTAGGCATGAAGCTGGAGGCTGTTCGAGCGGATCGGATGCGGGGTGGCAGGAACAAGTTTGGACCCATGTACAAGCGGGATCGGGCGCGGAAGCTGCAGGTGATGCGTCAACGGCAGATCGCCCTCCAGGCGCTGCGCAACTCGATGGGGCCGGACATCAAGCCGACGCCGATCTCGCCGGGCTACCAGCAAGCATATCCAAATATGAACATTAAGCAGGAAATCCAAATACCTCAGGTCTCCTCACTTACCCAATCGCCGGACTCGTCGCCCAGCCCCATTGCCATTGCTCTGGGCCAGGTGAATGCCAGCACGGGCGGAGTGATAGCCACGGCCATTAATGCCGGTAACGGGGGCAGTGGTGGCGGCGGCGGTAGCGGCCTGAACGGCCCCAGCTCCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGCAACGGAGCAGGTGGCGCCGGCGGAGGAGGCGGCGGCGGTGGTGGCAACAATGCGGGCGGCGGCGGCGGCAATAACAGCTCCACCGATGGCCTGCATCGCAACGGCGGCGGCAATGGCAACTGCCACGAAGCTGGAATAGGATCTCTGCAGAACTCGGCCGACTCGAAACTGTGCTTCGATTCCGGCACTCATCCATCGAGCACTGCCGATGCGCTTATCGAGCCACTGAGAGTCTCACCGATGATACGAGAATTTGTGCAATCGATCGACGATCGGGAATGGCAGACGCAGCTGTTCGCGCTGCTGCAGAAGCAGACCTACAACCAGGTGGAGGTGGATCTCTTTGAGCTGATGTGCAAGGTGCTCGATCAGAATCTGTTCTCGCAGGTGGACTGGGCAAGGAACACGGTCTTCTTTAAGGATCTGAAGGTCGATGATCAGATGAAGCTGCTGCAACACTCCTGGTCGGACATGCTGGTCCTCGATCATCTGCACCATCGCATCCACAATGGGCTGCCCGATGAGACGCAGCTGAACAACGGCCAGGTCTTCAATCTACTCAATGTGCGAGGCATTGTCAACAGGAAGACCGTGTCCGAGGGACATGACAATGTGCAGGCAGCCCTACTGGACTACACCCTCACCTGTTATCCTTCAGTCAATGACAAATTCAGTAGGCTAGTTAACATCTTACCGGAAATCCATGCCATGGCCGCACGCGGCGAGGAGCATCTCTACTCCAAGCACTGTGCCGGCAGTGCACCCACCCAGACGTTGCTCATGGAGATGCTGCACGCCAAGCGGAAGGTGTAG
- Protein Sequence
- MLLEMDQQQATVQFISSLNISPFSMQLEQQQQQPSSYQDTTSSHSQQSGGGGGGGGGAGGNILNGSSGSSSGYMLLPQAASSSGNTNAAHMSSASGSVGNASGPNGGGGGSGPGNAMGGTSATPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQIALQALRNSMGPDIKPTPISPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNASTGGVIATAINAGNGGSGGGGGSGLNGPSSVXXXXXXXXXXXXXXXXXXXXGNGAGGAGGGGGGGGGNNAGGGGGNNSSTDGLHRNGGGNGNCHEAGIGSLQNSADSKLCFDSGTHPSSTADALIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLLNVRGIVNRKTVSEGHDNVQAALLDYTLTCYPSVNDKFSRLVNILPEIHAMAARGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00536096; iTF_00536071;
- 90% Identity
- -
- 80% Identity
- -