Damb000042.1
Basic Information
- Insect
- Drosophila ambigua
- Gene Symbol
- DMRT2
- Assembly
- GCA_018150905.1
- Location
- JAECWS010000027.1:329222-330638[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-24 1.7e-20 72.3 16.3 1 47 13 59 13 59 0.99
Sequence Information
- Coding Sequence
- ATGAGCCAGATATCGCTGAAGGAACGCCGCCTCCTGCGCACACCCAAGTGCGCCCGCTGCCGCAACCACGGCGTCATCTCGTGCGTGAAGGGCCACAAGAAGCTGTGCCGCTGGCGCGAGTGCTGCTGCCCCAACTGTCAGCTGGTCGTCGATCGCCAGCGGGTGATGGCCGCCCAGGTGGCCCTGCGCCGCCAGCAGACAATGGAGGCCCTGGAGGCATCCGCCCAGACATCGCATCCAGCCACCGCATCCAGTAGCGAGGGCGAGGAGTCCCTAACTTCAACCTCGCCACCACCACCTCCGCCTTCAGCAGCCGCCTCCACATCCACATCCTCATCCTCATCAGCCACGCGCCAGGCACTGATTGCCCAGAAAAGGATCTACAAGCAGCGACTGCGCAACCTGCAACAGTCCACGTTGCACATCACAGCAGCCATGGAAGAGTACAAGCAAAGGTTTCCCACGTTCAGCTCTCCGCTGATGGAGCGAATGCGCAAGCGACGCGCGTTCGCTGATCCGGAACTCAACTACGCCATGGAGGCGACGCTGGGCGGTAACGCCCTCTATGCCGCCGCCGCTGCTGCTGCTGCTGCCGCCATGCATCAATCGGGGCCGCCACCGCCGCCGCCGTTCACAGCTTCCAGCCCCATCACAGCCGTCACGTTACCCACGCCGCCCGCACACGCCACGGCGAAGAAGCCCAAGCTGAGCTTTTCAATTGAGTCAATAATGGGCATTAGCACGTAG
- Protein Sequence
- MSQISLKERRLLRTPKCARCRNHGVISCVKGHKKLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEASAQTSHPATASSSEGEESLTSTSPPPPPPSAAASTSTSSSSSATRQALIAQKRIYKQRLRNLQQSTLHITAAMEEYKQRFPTFSSPLMERMRKRRAFADPELNYAMEATLGGNALYAAAAAAAAAAMHQSGPPPPPPFTASSPITAVTLPTPPAHATAKKPKLSFSIESIMGIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00484455;
- 90% Identity
- iTF_00487311; iTF_00563924; iTF_00514903; iTF_00601069; iTF_00603360; iTF_00611367;
- 80% Identity
- -