Damb004069.1
Basic Information
- Insect
- Drosophila ambigua
- Gene Symbol
- Rel
- Assembly
- GCA_018150905.1
- Location
- JAECWS010000100.1:6101862-6104854[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-53 6.2e-50 169.2 0.6 1 168 132 314 132 315 0.95 2 2 0.74 2.8e+03 -2.1 0.1 121 164 567 610 559 613 0.80
Sequence Information
- Coding Sequence
- ATGAATAACATCTACGATTTGGACAAGGGCAAGAACGTTCTGTACATGAACGACGCCTCCAGCACGAGTGGATATAGCAGCGGAAATTCGACAACATCGACAATGTCACCAGCACATTCCCCCGAAACATTGCAAAATGATTTTGCAAATCTGAATCTACCACCGGCGAACTCACCTCAACCGCCGCAGCTGCAAAGTTCACCAAATCAGCTGTTTTATTTCGATGCCAGCAATTTGTTGGGCAGCAACGCCACGAATGCCACGGGTTTTGGAAACATGTCTGTGGATCACCATTACTACGCCCCGGCCCCCGACACAATCGATGCGAGCTTTGGATACCAGCGAAACAATGGCGTGGAGGGCAATTCGGAGTTCGGACACATGCCCGCAGTCCTGAGAATCGTGGAACAACCTGTGGAAAAGTTTCGCTTTCGCTACAAGAGCGAAATGCACGGAACACATGGCTCGCTCAACGGTGCCAACTCGAAGCGGACACCAAAAACGTTTCCCGAGGTGACGCTCTGCAATTACGATGGACCGGCGGTGATACGGTGCAGCCTCTTCCAGACGAACCTGGATAGCCCACATTCCCACCAACTGGTGGTTCGCAAGGAGGAGCGCGATGTGTGCGACCCGCACGACCTGCACGTGTCCAAAGACCGTGGCTATGTGGCTCAGTTCATCAACATGGGCATCATACACACGGCCAAGAAGTATATATACGCTGAGCTCTTAAAAAAGAAGCAGGATCGCCTGGTGTTCGAGATGAAGCGTCGCGAGTTGTCCAAAAAGGAGCAGCAGACGCTGCACCAGGAGACAGAGCGCGAGGCCAAGGATATGAATCTGAATCAGGTGCGTCTCTGCTTTGAGGCCTATAAGATCGAGGACAATGGCGATTGGGTGCCCATTGCCACGCCCGTCTTCAGTAATGCGATCAACAATCGCAAGTCCGCGCAAACGGGAGAGCTGCGCATTGTGCGGCTGAGCAAACCGACGGGCTCTGTGCTGGGCAACGATGAGCTCATCCTGCTCGTGGAGAAGGTCAGCAAGAAGAACATCAAGGTGCGCTTCTTCGAGGAGAACGAGGATGGGGAGACTGTATGGGAGTCGTATGCCAAGTTCCGTGAATCAGATGTCCATCATCAGTATGCCATCGTTTGCCAGACGCCCACCTACAAGGACAAGGATGTGGACAGAGAGGTGAATGTCCTCATTGAGCTGATACGACCATCGGACGACGAGCGCTCCGAGCCGCCGCTGCAGTTCCGTTACAAGCCACGCGATGCCATCGCCTCGCGTAAACGCCGCCGCACATGTTCGATGGCCACCAACAGCAGTTCGGGCGGCAGTGCCCAGAACTCGGCAGATCTGCCCAGGACACTGGCTCTGGCCCAGCGCCAGATTGTTGGTCAGCAAATGCCCATGGGGGAAACGTCCCACGGGTACCACGATCAGACCATCAGCCAGGAGTTTGGACGAGATATTGTACTCAAGGACCTGATCTCACCGGAAGAATGTCGCAAGCTTTGCGATACGAAAAGCAGTGACCTCGAGGCGATGTGTCTGGACAATATGGACCTCCTTCAGTCTGGCTACCTTCAGCATGATGGCCATGGACAAGCAGCGGAGCGACCTGCTAACCCAGCAGCAGCAGCAGCACCCAACCGCAATTGGACGCAACACTTTTTGAATGCAATCTTCAAGATCTACGAGGCACATCGTCGGTCACCAAATGACACCTCGCGCAAGCAGGTGGAGGAGATGTTCACGGAACACGCCCTGCGGAACGACAACAACGACACGCTGCTGCACGAAGTGATCATCAGTCAGCGGACAGAGGGACAGCTGACGCAAGCCATCCGCACCATTGATGTGATGAAATACTTTAAGCTGCACGATCTGGCGAACAACGCCATCAATGCGGATGGTGATGGTGCCCTGCATGTGGCCTGTCAGCATGATCGCTTCTACTACATTCGCCCACTGCTGAGCCTTGGATGTAGTCCAAATCAGCAGAATCATGCGGGCAATACGCCGCTGCATATGGCTGTGAAGGAGGAGCGAATGTCCTGCATAGACAGTTTCCTGAAGCGTGACACTGGCACGCCCACCGTGCGGCTGGACCTGACGCTCAAAAATGACGACGGATTGACGCCACTCCATATGGCCATTCGGCAGAACAAGTACGATGTGGCCAAGAAGCTCATCAATCATGACCGCAGCTCAATTAGTGTCGCGAATACAAAAGACGGCAACAATGCCCTCCACATGGCGGTGCTCGAGCAGAGCCATGCACTGATTGTGCTCATTGTAGATGCCCAGGACACGACCATCTCGGACATATTAATGTCGCGCAATTCGGCCGGTTATACGCCGCTGGAGTTGGCGCGTTGCAAGGGCGATGGGCAGGTGTTGCAGCTGCTGGACAGAGTGTATTCGGAGAAGAATGATGCGGCGGCCATGACCTGGATACCCAACAAAATCAAAGAGGAGCTAGACACCTCCTCCGATGAGAGTAGCGAGGCAGCGCTCGAGATCAAAACCGAAGAGATTGACATCAAAACGGAGTCGTCGGAGGAGGATAGCCGCGAAATGGAACTGGGCGGCAATGAAGTAGATTGCAACGAGACGGAAGTGGAGACGACCATCGATTCCAAATACAATCTTCAGCTGCTGCTGAGCAACAAGCAGCGATTCGAGAAGCTAAAGACACTGCTAAACGAACCGATTGGCAGCGGACCGGATGCCCAGCAGCCCAAATGGAAGCATTTGGCACGCATTACGCACATGGACCGTTTCAGTATCTTTTGGCTGGATGCCGAGGCCATGCTCGATTATATACTGAATAATGCCAAGTGTGTGGAGTACAGCACCTTTGCCTTGGCCCTCGAAATGATCGATTCAGACGCACCGGCTCTGCTTAATTAA
- Protein Sequence
- MNNIYDLDKGKNVLYMNDASSTSGYSSGNSTTSTMSPAHSPETLQNDFANLNLPPANSPQPPQLQSSPNQLFYFDASNLLGSNATNATGFGNMSVDHHYYAPAPDTIDASFGYQRNNGVEGNSEFGHMPAVLRIVEQPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVTLCNYDGPAVIRCSLFQTNLDSPHSHQLVVRKEERDVCDPHDLHVSKDRGYVAQFINMGIIHTAKKYIYAELLKKKQDRLVFEMKRRELSKKEQQTLHQETEREAKDMNLNQVRLCFEAYKIEDNGDWVPIATPVFSNAINNRKSAQTGELRIVRLSKPTGSVLGNDELILLVEKVSKKNIKVRFFEENEDGETVWESYAKFRESDVHHQYAIVCQTPTYKDKDVDREVNVLIELIRPSDDERSEPPLQFRYKPRDAIASRKRRRTCSMATNSSSGGSAQNSADLPRTLALAQRQIVGQQMPMGETSHGYHDQTISQEFGRDIVLKDLISPEECRKLCDTKSSDLEAMCLDNMDLLQSGYLQHDGHGQAAERPANPAAAAAPNRNWTQHFLNAIFKIYEAHRRSPNDTSRKQVEEMFTEHALRNDNNDTLLHEVIISQRTEGQLTQAIRTIDVMKYFKLHDLANNAINADGDGALHVACQHDRFYYIRPLLSLGCSPNQQNHAGNTPLHMAVKEERMSCIDSFLKRDTGTPTVRLDLTLKNDDGLTPLHMAIRQNKYDVAKKLINHDRSSISVANTKDGNNALHMAVLEQSHALIVLIVDAQDTTISDILMSRNSAGYTPLELARCKGDGQVLQLLDRVYSEKNDAAAMTWIPNKIKEELDTSSDESSEAALEIKTEEIDIKTESSEEDSREMELGGNEVDCNETEVETTIDSKYNLQLLLSNKQRFEKLKTLLNEPIGSGPDAQQPKWKHLARITHMDRFSIFWLDAEAMLDYILNNAKCVEYSTFALALEMIDSDAPALLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517485;
- 90% Identity
- -
- 80% Identity
- -