Basic Information

Insect: Drosophila algonquin
Gene Symbol: -
Assembly: GCA_035041765.1
Location: JAWNKY010002018.1:2981399-2983368[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.084 7 7.5 0.3 1 21 300 320 300 321 0.95

2 10 2.1e-06 0.00018 22.0 0.1 1 23 329 351 329 351 0.98

3 10 0.0015 0.12 13.0 0.3 1 23 354 377 354 377 0.93

4 10 1.2e-06 9.6e-05 22.8 1.0 2 23 384 405 383 405 0.98

5 10 1.8e-07 1.5e-05 25.3 1.3 1 23 411 433 411 433 0.95

6 10 2.2e-06 0.00018 21.9 0.9 1 23 439 461 439 461 0.99

7 10 0.015 1.3 9.8 4.0 1 23 467 489 467 489 0.98

8 10 0.00093 0.077 13.7 0.3 1 23 495 517 495 517 0.98

9 10 0.00021 0.018 15.7 3.9 1 23 523 545 523 545 0.99

10 10 0.00062 0.051 14.2 0.0 1 23 551 573 551 573 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.084	7	7.5	0.3	1	21	300	320	300	321	0.95
2	10	2.1e-06	0.00018	22.0	0.1	1	23	329	351	329	351	0.98
3	10	0.0015	0.12	13.0	0.3	1	23	354	377	354	377	0.93
4	10	1.2e-06	9.6e-05	22.8	1.0	2	23	384	405	383	405	0.98
5	10	1.8e-07	1.5e-05	25.3	1.3	1	23	411	433	411	433	0.95
6	10	2.2e-06	0.00018	21.9	0.9	1	23	439	461	439	461	0.99
7	10	0.015	1.3	9.8	4.0	1	23	467	489	467	489	0.98
8	10	0.00093	0.077	13.7	0.3	1	23	495	517	495	517	0.98
9	10	0.00021	0.018	15.7	3.9	1	23	523	545	523	545	0.99
10	10	0.00062	0.051	14.2	0.0	1	23	551	573	551	573	0.97

Sequence Information

Coding Sequence: ATGGATGTGGAGAAGATTTGCCTGACCTGCTTGAGTCTGAATGGGCCGTTTCTATCCATTTATGAGGGCGGAGTAGGCAGCTGCCTGGCCGATATGCTTAAACAATTCACAAAAACCAAGCCGCGCCCCGAGGATAATCTGCCCAAACGGGTGTGCCTGAGCTGCCTGAGCGAAATCAACCACTGCTACACGTTCAAGATCAAGTGCGAGAACTCAAGTCGAACACTTCGCCAGCTGCTGCCAAATGCCTTGCCGGAGGAGCCCGATTTCGCCCCCACGAAGTCTGTGGACTCTGCCGAGAAGGCCGTACAGACCACCGAACCCTGTGCCCCgacaacagccacagctgcAGTGCAGACCACAGCGGTGCCCACCACAGATGCCGCGCAGAACACCAGCCTGGATAGGTCTGTATCTGCCTCCGAAGACGAGGATGCAGACGAAGACGGTGAAGACTGCGAGGTTTTTGACTACGAGATACCCGTAGAGGCTGCTGAAAAGGAAGAAAATGATAAAGATACCACCGAGTCCGAGAGTCAGAAGATAACAGAATGTAATATAGCTCTATTCGAGGCTCCCGACAGGGACACAGAGACACCAGAACCCGCACAGGCTACCAAACCGCAGTTGAGGACACGAAAAAGTGTCGCCAAACTGCTGTttcaaaagcagcagcaggagcaggtgaCGCAGTCGCCCAAGAGGGAAATAGAAGACTCACAGACaccgacagagacagagccagaggcagaatCTCAGCAAACACCCGCCAAGAGAACCTCACGACGTCGTCCAGCCGAAAAACAAACTGAAGATCAATCCACAGCACAAATGGTGGCTACGGTGCCAAAACTGATCAAACTCAGCATCACCCATGGAGAAATAATGGATCTAAAGTATCATTGTGATCGCTGCAATGCTGGCTTTGCCTTGGAGAAGTCCCTGATGATACATCGTCGACAGAAGGGTTGCATCAATCGCAATTATCCCTGCAATGAGTGCGAGCGGGTGTTCGTTTCCCCCGAACATCTTGCCGAGCATCAGGCCACCCATGGAACATTCAATTGCCAGGAGTGTGACCTGCAGTACGACTCCAAGGAGCAGCTGGGCAAGCACATGGTGCAGGGCCACAAAAGGAATCTGCGCAATCAGTGCAATGTTTGTAAGAAGGTTTTTACCATGCTATCGACCCTGCGGGATCACATGCGCATCCACACCGGGGAGAAGCCATTCCTGTGCAACATTTGTGGCAAAAGCTTCACCCAGAATGCCAATCTGCGGCAGCACAAGCTCCGCCACTCAGACATCAAGCGTTTCAAGTGCGCCGAGTGTCCGCATTCGTTTGTGACCAAAGCGGAGCTGACATCCCATGCCCGCACCCACTCCGGCGTCAAGCCGTTCGAGTGCGAGGTGTGCATGTCCAGGTTTACGACCAGCTGCTCGCTGGCCAAGCACAAGCGTAAACACACCGGGGAGCGACCCTATGCCTGCGACTTGTGTCCCATGCGCTTTACGGCACTCAATGTGCTCAAGAATCATCGACGCACCCACACCGGAGAGCGTCCCTATGTGTGCCCCTTCTGCTCGAAGACCTTCACACAACGCGGCGATTGCCAGATGCATCAGAAGACCCATCAGGGCGACAAGATCTACATTTGTCCGGTGTGCAACGAGGAGTTCAAATCAATGCCAGAGATGCGCACACATTTGGCCATACACGAGCAGGAGGACAAGCGCTTGATGCACTTTACGCTGCTCAGCAACAaggagaatgggaatgggggggCCCTGGACGATGAGCTCACTGAAGTGACCGATTCGGCATTGATGTTATAA
Protein Sequence: MDVEKICLTCLSLNGPFLSIYEGGVGSCLADMLKQFTKTKPRPEDNLPKRVCLSCLSEINHCYTFKIKCENSSRTLRQLLPNALPEEPDFAPTKSVDSAEKAVQTTEPCAPTTATAAVQTTAVPTTDAAQNTSLDRSVSASEDEDADEDGEDCEVFDYEIPVEAAEKEENDKDTTESESQKITECNIALFEAPDRDTETPEPAQATKPQLRTRKSVAKLLFQKQQQEQVTQSPKREIEDSQTPTETEPEAESQQTPAKRTSRRRPAEKQTEDQSTAQMVATVPKLIKLSITHGEIMDLKYHCDRCNAGFALEKSLMIHRRQKGCINRNYPCNECERVFVSPEHLAEHQATHGTFNCQECDLQYDSKEQLGKHMVQGHKRNLRNQCNVCKKVFTMLSTLRDHMRIHTGEKPFLCNICGKSFTQNANLRQHKLRHSDIKRFKCAECPHSFVTKAELTSHARTHSGVKPFECEVCMSRFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQKTHQGDKIYICPVCNEEFKSMPEMRTHLAIHEQEDKRLMHFTLLSNKENGNGGALDDELTEVTDSALML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00484572;
90% Identity: iTF_00471789;
80% Identity: -