Basic Information

Insect: Drosophila algonquin
Gene Symbol: -
Assembly: GCA_035041765.1
Location: JAWNKY010002018.1:2811476-2814800[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.16 13 6.6 0.3 1 20 97 116 97 120 0.94

2 19 0.0023 0.19 12.4 0.3 2 22 130 150 127 150 0.90

3 19 5.6 4.7e+02 1.8 3.8 1 23 159 182 159 182 0.91

4 19 0.0007 0.058 14.1 1.6 2 23 208 229 207 229 0.97

5 19 5.5e-06 0.00046 20.7 2.5 1 23 237 259 237 259 0.99

6 19 0.027 2.3 9.0 2.1 1 23 412 434 412 435 0.94

7 19 0.017 1.4 9.7 0.4 2 22 443 463 442 463 0.95

8 19 0.025 2.1 9.2 0.6 1 23 472 495 472 495 0.90

9 19 1.1e-05 0.00093 19.7 1.2 2 23 518 539 517 539 0.97

10 19 8.8e-05 0.0073 16.9 1.2 1 23 546 568 546 568 0.98

11 19 0.018 1.5 9.6 0.0 2 21 595 614 594 615 0.93

12 19 0.0074 0.61 10.8 3.9 1 23 661 684 661 684 0.96

13 19 0.0042 0.35 11.6 0.5 1 23 721 744 721 744 0.96

14 19 0.00018 0.015 15.9 1.5 1 23 768 791 768 791 0.97

15 19 3.4e-06 0.00028 21.3 0.2 2 23 819 840 818 840 0.95

16 19 9.5e-05 0.0078 16.8 2.9 1 23 846 868 846 868 0.99

17 19 2.3e-06 0.00019 21.9 2.0 1 23 874 896 874 896 0.97

18 19 1.2e-07 9.8e-06 25.9 2.4 1 23 902 924 902 924 0.99

19 19 0.0008 0.066 13.9 0.1 1 21 930 950 930 954 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.16	13	6.6	0.3	1	20	97	116	97	120	0.94
2	19	0.0023	0.19	12.4	0.3	2	22	130	150	127	150	0.90
3	19	5.6	4.7e+02	1.8	3.8	1	23	159	182	159	182	0.91
4	19	0.0007	0.058	14.1	1.6	2	23	208	229	207	229	0.97
5	19	5.5e-06	0.00046	20.7	2.5	1	23	237	259	237	259	0.99
6	19	0.027	2.3	9.0	2.1	1	23	412	434	412	435	0.94
7	19	0.017	1.4	9.7	0.4	2	22	443	463	442	463	0.95
8	19	0.025	2.1	9.2	0.6	1	23	472	495	472	495	0.90
9	19	1.1e-05	0.00093	19.7	1.2	2	23	518	539	517	539	0.97
10	19	8.8e-05	0.0073	16.9	1.2	1	23	546	568	546	568	0.98
11	19	0.018	1.5	9.6	0.0	2	21	595	614	594	615	0.93
12	19	0.0074	0.61	10.8	3.9	1	23	661	684	661	684	0.96
13	19	0.0042	0.35	11.6	0.5	1	23	721	744	721	744	0.96
14	19	0.00018	0.015	15.9	1.5	1	23	768	791	768	791	0.97
15	19	3.4e-06	0.00028	21.3	0.2	2	23	819	840	818	840	0.95
16	19	9.5e-05	0.0078	16.8	2.9	1	23	846	868	846	868	0.99
17	19	2.3e-06	0.00019	21.9	2.0	1	23	874	896	874	896	0.97
18	19	1.2e-07	9.8e-06	25.9	2.4	1	23	902	924	902	924	0.99
19	19	0.0008	0.066	13.9	0.1	1	21	930	950	930	954	0.91

Sequence Information

Coding Sequence: ATGGATAGAATTCCCTCAAGGCAAATGTCGTGTCTCTTTCTTTACCCCCCAATTGCCCCCAATCTTTGCGTTGAGAAGAAATCTGCCTTCTTCCGTTCTTACTATCCCAACGGATTGGGCTGCAGCCTCTCAGAGCTGAGCTCCCGCATAGCTGGGGATTATGAGGCCAAAGACTTTGGACGCTACTACAACGCCTGCACGGGAAGTGGTCAAGAGCTGGATCTCTTTGACTCTGACACGGAGGAGACcgatgaggcagacaaaacagaGGAAAAGCCGAAACCCTCGCACACCTGCCTGCTCTGTGGAGAGACAACTATTCGTCTGCTCAAGCTGCTGCGACATCAATGGATACTCCACTCCGAAGAGGGCACCACGTACCCCTGCTCATGCCAGTATTGTGGCGCTGGCTTCGTCTCAGAGCCCTTGCTTCAGCAACATCGAAGACGTTCCTGTGCCAAAAAGCACTCGAAATACCAATGCCAGCGATGCAATCTTCATTTTGTATGGCAATCGAACCACGAGCAACATCTGCAATTGTACCACGACAAGGACGGGGATCAGGAGCAGTCGGAGGACTGCCAGCAGGGTGGAAAACATAAATCTTCGGCTGCCAAGCTTCAGTGCGATGAATGTGAAAAGgTCTTCATTTGGCACAAGGATCTCACCCGTCACAAGCGAATGCATCGCCCGCCGTCGGCAGCCCAATACGAGTGTGCCTATTGCGACCGGAAGTTCCACCGCAAAGATGGCCTCAAGTCCCACCTGCGGGTGCacaacgagcagcagcaggagacagTGAATGAGGAGCCGTCTTGCGCCCAATCGACCTCTACGAACAGTATTCAGAGAATGCCCGGGGAGCAGCTGACCCAACTATGCCGTCCAAATGGTTGCAAGCAAATCCAGTGCATGATTTGCCTATCGCGTCACTCGAAGATCGCCGATTTGAGAAATCACCTAAGCACGCACCAATATGGTGTGTGCTTTCCACAGGAGAGAGATATTCCCAGTGCCTCGCGCTCGTTGTATCCGGAACTGGGCACTGTTTTGGAtaagcaggagctggaggggAGGATCATGAGCGATGTGGCCGGCGGCTTGGAGTTGGAGCGATTCATTTCCATAACCAACGAGGCTGGCATTGAGCTCTCTCTTGAGAGCAGTGAAACGGAAACGGATTCAGAGCAGGACGAGGATGACGAGAGTTCCGAGGAAGCTGACCAGCAGCGGTACGCCTGCAACATCTGTCAGGTGGAGGTGAGGCGAAAGCATCAAATGTATGCCCATCAGTTAGACCATCACCAGTGGGAGGAGGCTTCGCTTGTGTGTGCCCACTGTCAGGCGAGATTCGTGAGTGTAACGCTGCTGGAGCATCACTACAGAACCCTCTGCCGGAACCCACAGAAGCGTTTCCAGTGCCGAAAGTGTCCGCTACGCTTCCGCTGGCGGGAGAACCTGAAGCTGCACGCAAGTGCCTCCCATCAGCAAATTGGACAGCCCCAAGCTGCAGAGGAACAGAGGAGCGGCATCCAGACTGAGTTCGACCTGCAGTGTGGAGAGTGCAATCGCAGCTTCAAGATGCAGAAGGATCTCACGCGGCATACGCTGATGCATGCCCAGGAATCGAGCATATATCGTTGTCGTTGGTGTGCCCGCCGCTTCTACAGGAAGGCCAATCTCCTGCAGCACATTGAGCGGCATGGCATCGGAGCTAGCCAGCTGCCCTACGCGGAAGCTCTCCTCAATGCCTATGGTCAACCGAATGGCCAGAAGAGCGTGGAGTGCAAGGTGTGCAGCTTGAGCTTTCCCAGTATTGCTGCACTTCGCGTCCATCTGGAGACCACGGCGACGGGCAGTCACCACGAACTATCGTCCCTACAGAACTACTCGATAACCAACCAAATGGGATTCGAGCTGCACTTGGACGACTCGGAGACGGATGAGGAGGAGTCCAAGCCACCGGGCACGCCTGCTGTCTACACCTGCGGCATGTGCCAGCTCCGGTGTGTGCGAAAGTACGAGctgcatcagcaccagcaggcCATGCACAGGCTGGAGAAGATCCCCGATGGCTGCAATCTGTGCATTTTCAAGAGTGTCTCTCCCGATCTTATCGCCCATCACAAGCGAGTGCAGTGCCACAACCGCGAGAAGCAGTTCACCTGTGCCAAATGCGGCTACAAGTTTATGTGGGAGTCCAATCTCCTGCTGCACATGCAGCTGCAACATGGCAAGGCCGAAGAACAGGATGATCCACCTCTGGACGAGCCCGTGGAGCAGAAGGCTGTGTGCCCAGTTTTTCAGTGCGGCCTCTGCCCAAGGAAATACAATCGCAAGGATCGGCTGACGGCCCATGTGAAGAAGTTCCACAACCCAGTGGTAGGGAGCGCTCCGAACACCATAAGGACTGCTCCCATCCGGCCAACTTCGCCCAAGGAGCCGAAACGCTTCCTATGCGCCTTCTGTGGCAAGGCTGTAAGCTCCTCCTCGAACCTCATCATCCACATGCGTCGGCACACGGGCGAGAAGCCTTTCAAGTGCGACTACTGCGAAATGGCCTTTCCGCGCTCCTCCGATCTCCAGTGCCATCGACGAACGCACACCGGGGAACGGCCCCACATCTGCACCGTCTGCCAGAAGGGCTTCGCCAGATCCTAcaaactgcagcagcacatGCGCATCCACAACGGCGAGCGGCCCTACAAGTGCACCTACTGCGAAAAGAGCTTCACCCAGTCCAACGACCTGACACTCCACATCCGCCGCCACACGGGCGAGCGTCCCTATCAGTGCGGGGTCTGTGGCGAGCGTTTCATCCAGGGTACGGCCCTGAAGAATCATCGCCTACAGCAGGGCCACTATGACGAGGCCAGCCAAGGCGCGGCAGAGTCCGCAAGACGCACGGTCCTAGAGCAATTTACAGTTGAATAA
Protein Sequence: MDRIPSRQMSCLFLYPPIAPNLCVEKKSAFFRSYYPNGLGCSLSELSSRIAGDYEAKDFGRYYNACTGSGQELDLFDSDTEETDEADKTEEKPKPSHTCLLCGETTIRLLKLLRHQWILHSEEGTTYPCSCQYCGAGFVSEPLLQQHRRRSCAKKHSKYQCQRCNLHFVWQSNHEQHLQLYHDKDGDQEQSEDCQQGGKHKSSAAKLQCDECEKVFIWHKDLTRHKRMHRPPSAAQYECAYCDRKFHRKDGLKSHLRVHNEQQQETVNEEPSCAQSTSTNSIQRMPGEQLTQLCRPNGCKQIQCMICLSRHSKIADLRNHLSTHQYGVCFPQERDIPSASRSLYPELGTVLDKQELEGRIMSDVAGGLELERFISITNEAGIELSLESSETETDSEQDEDDESSEEADQQRYACNICQVEVRRKHQMYAHQLDHHQWEEASLVCAHCQARFVSVTLLEHHYRTLCRNPQKRFQCRKCPLRFRWRENLKLHASASHQQIGQPQAAEEQRSGIQTEFDLQCGECNRSFKMQKDLTRHTLMHAQESSIYRCRWCARRFYRKANLLQHIERHGIGASQLPYAEALLNAYGQPNGQKSVECKVCSLSFPSIAALRVHLETTATGSHHELSSLQNYSITNQMGFELHLDDSETDEEESKPPGTPAVYTCGMCQLRCVRKYELHQHQQAMHRLEKIPDGCNLCIFKSVSPDLIAHHKRVQCHNREKQFTCAKCGYKFMWESNLLLHMQLQHGKAEEQDDPPLDEPVEQKAVCPVFQCGLCPRKYNRKDRLTAHVKKFHNPVVGSAPNTIRTAPIRPTSPKEPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCDYCEMAFPRSSDLQCHRRTHTGERPHICTVCQKGFARSYKLQQHMRIHNGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGVCGERFIQGTALKNHRLQQGHYDEASQGAAESARRTVLEQFTVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00471775;
90% Identity: iTF_00471775;
80% Identity: -