Basic Information

Insect: Drosophila albomicans
Gene Symbol: L
Assembly: GCA_009650485.1
Location: NC:51236714-51270010[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 9.2e-06 0.00055 19.8 2.9 1 23 193 215 193 215 0.98

2 17 0.32 19 5.5 6.2 1 23 221 243 221 243 0.97

3 17 1.5e-07 9.2e-06 25.4 3.2 1 23 249 271 249 271 0.99

4 17 1.1e-05 0.00068 19.6 0.4 1 23 277 299 277 299 0.99

5 17 0.03 1.8 8.8 0.1 2 23 381 405 380 405 0.91

6 17 0.00037 0.022 14.8 0.3 2 23 430 452 429 452 0.95

7 17 0.025 1.5 9.0 0.7 1 23 532 554 532 554 0.97

8 17 0.0047 0.28 11.3 0.1 2 23 562 583 561 583 0.91

9 17 5.9e-05 0.0035 17.3 0.2 1 23 591 616 591 616 0.93

10 17 4.7 2.8e+02 1.9 1.6 2 23 652 674 651 674 0.95

11 17 0.0023 0.14 12.3 1.1 1 23 728 751 728 751 0.97

12 17 0.0015 0.088 12.9 1.8 2 23 931 953 930 953 0.96

13 17 0.045 2.7 8.2 0.0 1 23 959 981 959 981 0.93

14 17 0.23 14 6.0 0.6 2 23 989 1010 988 1010 0.96

15 17 0.67 40 4.5 0.5 2 23 1112 1133 1112 1133 0.94

16 17 0.033 2 8.7 0.0 1 23 1143 1165 1143 1165 0.96

17 17 0.0002 0.012 15.6 1.2 1 23 1170 1192 1170 1192 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	9.2e-06	0.00055	19.8	2.9	1	23	193	215	193	215	0.98
2	17	0.32	19	5.5	6.2	1	23	221	243	221	243	0.97
3	17	1.5e-07	9.2e-06	25.4	3.2	1	23	249	271	249	271	0.99
4	17	1.1e-05	0.00068	19.6	0.4	1	23	277	299	277	299	0.99
5	17	0.03	1.8	8.8	0.1	2	23	381	405	380	405	0.91
6	17	0.00037	0.022	14.8	0.3	2	23	430	452	429	452	0.95
7	17	0.025	1.5	9.0	0.7	1	23	532	554	532	554	0.97
8	17	0.0047	0.28	11.3	0.1	2	23	562	583	561	583	0.91
9	17	5.9e-05	0.0035	17.3	0.2	1	23	591	616	591	616	0.93
10	17	4.7	2.8e+02	1.9	1.6	2	23	652	674	651	674	0.95
11	17	0.0023	0.14	12.3	1.1	1	23	728	751	728	751	0.97
12	17	0.0015	0.088	12.9	1.8	2	23	931	953	930	953	0.96
13	17	0.045	2.7	8.2	0.0	1	23	959	981	959	981	0.93
14	17	0.23	14	6.0	0.6	2	23	989	1010	988	1010	0.96
15	17	0.67	40	4.5	0.5	2	23	1112	1133	1112	1133	0.94
16	17	0.033	2	8.7	0.0	1	23	1143	1165	1143	1165	0.96
17	17	0.0002	0.012	15.6	1.2	1	23	1170	1192	1170	1192	0.97

Sequence Information

Coding Sequence: ATGGCGCATTCAGAGGATGCGGATGACATTGAGGAGGATGTGGATGAGATGCTCAGCCTCAGTGGCGAGGAGGAttacgatgacgatgacgacgacgacgaagatgacgatgaggaACTGCACAGTCTGGACAGCTTCTACTCAGACATGTACAGCACGCACACCTCCTCCAGCTACTCGCCCAGCATCTCGGACGGCACATTGACGCCCAACTCACAGCAGCCGCATCCACAGCACTTGGTTGCCGGCGAGGATCCGCACTCGGAGCAGTCCAAGACTAACGGAGACATCTCGACTACAGCTGAGGAGGATCGAGAGCGTGACAGGGAACGGGAACGAGAACGGGAGCGAGAACCAACAAAGCTTAAGAGACCCGCCCATTtgcatcaccatcatcatcattatcatcatcagcaaGCGTTGAAAATTGCCAACAAGTTGCGGAAAATCAATAAGGAAGCAAAGCTTACAGGACCCACAGGAGGCGGAGGTGCAGGTGGCAACACTggcgcaacagcagccacaaagtTTGATAAGTTGACAGGCGACGGCATTAAGAACCGAGGCGACGGCTCCTATCAGTGTCAGTTCTGCGACAAATCATTTCCACGACTCGGTTACTTGAAGCATCACGTCCAGaGCCATGCCGAACATTTGCCTTTCAAATGCGAATATTGCGCCAAGTTATTCAAGCACAAGCGTTCCCGAGATCGCCATAAGAAGCTCCACACCAACGAAAGGAACTACAAGTGTCCGCATTGCGAAGCCGCTTTCTCCAGAAGCGACCATCTGAAGATCCACATGAAGACGCACGACATCCAGAAGCCCTTCCAGTGCAGCATGTGCAACCGAGGCTACAACACAGCTGCCGCACTCACCTCGCACATGCAGAAGCACAAGAAGAATGCGGCAATACTGGCAGCTGGTGGCAACCCTAATGCGCTCAACTACAGTCCACGCAGTACAGGCTCAGCCTCCGCCTCGGCCTCCATCTCGAGCAATGGGAGTCTGCACAAGCGACGCTATGCGCTCGCACTCGCCTCCGACAGCAGCCCGAGTCGCCTGGATTACCCCAAGCGCAGTCGTGGCCAACAAGTGCCAACTACGCCCACTCCCACGCCCCTGCCGACACCGTTGCTGCGTTGCAGCTATTGTCCCAAGGCGATGGAGTTCAGCAGCCTGGAGCAGCTGAATGCGCATCTGCAGCAGGCGCACGAGCAGCCGACAACGGAGGTGACACACGCAGCTGGCGAGGAGTCTAAGCTGCAGGCAAATGGCTTCCAGCTCAGCTGCGAATATTGCACCATGAGATTCAGCAATATTGCGGGATTATTCCAACACATGCGGGCCACACACCTCGACCGCTTGAGCAGCCCCAACTCCTACTACGAGCACTTCAATCGCCTGGCCACCGCAGGCACCTTCAGTCCACGCCTTGCGCTCGAGCTGCCCGCTAAGATCAAGCCGGATCTGAGCAGTCCACAGCTGGAGAAACCTGAACAGGAGCTGCCCACCGATCTGAGCAGCAACAAGCGTCGCACAGTGTCGCCACCTGTCGTTGCTACCACTGCAGCACCAGCGCCACCTGGCGTCTTCTTTTGCAATCAATGCAACGCCGGACTGCCGGACTTTGAGAGCTTCCGCAATCATCTCAAGACACACATTGCCGAAGGCATGCAACTCATTTGTCCCCACTGCGGACTCAGTTTGCCCGAGCAGAGCGAATTCGAGCGTCATGTGGTTGCCCATTTCCTCATCGCCAGCTGTGAGTTTAACTGCAGCGCTGGCAGCTGTGGCAAATCCTTTGCCAAGTCCGACGAGTTGCAGCAGCATTTGCAGAGCGAACACGTCCTCACGCTACTCAAATGTGCTCTCTGTGCGGAGATCTGCGAGACGCGGATGGCAATGCAGCTGCATCTGGCCTGTGCCCATGGCCAGGAGACGAAGCTGCTCCGTTGCAGCGCCTGCCTGGAGCTGTTTCGCAACGACACCGACTTCCATGTGCATGTGAAGACACGCCATCAGCTGGCAGGCAATCAGGGTGTTGCACCGCCCGCTCCTGTTGCTCCAGGACATGCTCCGGGACCAGGACAAACCAATCCGCTGCAGTGCATGTTCTGCCGGGCAGTCTGTTCCTCGGAGCTGGAGATGCACTTCCATTTGGCGGCGCATGCGCGTCAGTTCCGCTGTCCCTCGTGTCCCGAGACCTTCCACGTGGAGTTCTTGCTCGACAGGCACATGCAGAGCCAGCATGGCGGCGTCAAGGAACACAGTCCCCCTCAGGTCAAGGACAGCTCACCCAACATGGGCAGCCTCTATGTGAATGCGCTGCTTCCTCCgctggcagctgctgccgctgctgctgctgcagccacgaacaacaacagcaatctgCACATTGACTACAATGTGGCCTTCAAGGGCCTCTTTGGGGGAGCAGGAGCTGCAGCCCCAGCCGCTGGGAAGTTCTACAGTCCGCTGCAGGTGGACACGAGTGGCTTGAAGCCACAACAGTCACCACATCCGGCACTGATGTACGGACTGAGCCAGCGCTATCTGATGGAGATGTATGCGGCCAAGGCGACATCTCCGGCAGCAGCCAGCGCGTCAGAGGTGCCATCCACCccatcgcagtcgcagccatCAAGTGGAGGCGCCACTTCCCAAGCAGCTGCCACTGGGAGCAGCAACTATAGCTGCGGCATGTGCGAGCGTCAGGATCTACGCAGCGAGGCCGAGCTGCATTCGCATCGCAAATTGGCCCACAACCTGAAGACAGGAGTGAGTCTGAGATGCGCCTACTGCTCGGGGAACTTCAAGTCGCGTGCGGAACTGGAGCAGCACATGAAGAGTTGCCACAACTCGAGTGGCAAGTACAAGTGTCTCATCTGCGACGAGATATTCCCCTCGCCAGCCATTCTTGCCGAGCACAAGCTGCAGCACTCCAAGGTGGGACAATCGGGAAAGTGTGCCCACTGTGGTCAGCAACTGGAGCATGTGGCCGCCTTCCGAGCCCATCTTAGTGAGCATGGCGGCGACGGCAACCTGCCCATGGCTTGCATCTGTTGTCGCCAGACGCTTCACTCGGAGTTCGAGTTGAGTCTGCATGCCAAGTTCCACACCAAGTCGAGCAGCGGTGTCGGTAGTCTCCAAGAACCCGTCTGTGCTCTCTGCTTAGAGCCCTTGCCTGGAGCAGGAGACACTGCCAAGTTGTGCGACAAATGCTGTCGCAAGCACAATCTCAATCTGAATGGCAAGCGCAGCAAGGAGTCGACTGCTCCATCGGCTACTGCTGCTCCAGCGAATGTTGCTCCTTCGAACTATCTGGAGAATCGCTGCAATCTCTGCAAGATGATACTGCCTCATGCCCAGAAACTGCAAGAACATCTCGTGGAGCACACTTTCGCCGGCACCGAGCAACGCGGCTTCAACTGTTACATCTGCTCGGCGGTCTTCACGGCGCCAGCGGGTCTCCTTAGCCACATTGCGGAGCACGGTGCACGTCCCTATGACTGCAACTTGTGCCCGGAGAAGTTCTACTTTCGCGCCGAGCTGGAGCATCATCAGCGAGCCCATGAATTGAGACCAGCTGCTGTTCCCGCTGCGCCAGCTGCTCGAGTTGCCAAGCAGGAAACACGCAGTTCCTCAACCTccgcttcggcttcggctagTTCTCCCATTGCTTTGAGTCCGAGACATGTGAAGCAGGAGCTCTACGAATCGGAGACGGCACCCTCGCCTCCTCTAGCCACAGAGGCGACCGTACAGGACGAAGAAGAGTACATCGAAGTGGAGCAGATGCCGCTGGAAACGCGTTCCTCGGAGCTTTTGACTACCGGGCACCCAGAACGTTCCAGCAGCAGCGCCTGA
Protein Sequence: MAHSEDADDIEEDVDEMLSLSGEEDYDDDDDDDEDDDEELHSLDSFYSDMYSTHTSSSYSPSISDGTLTPNSQQPHPQHLVAGEDPHSEQSKTNGDISTTAEEDRERDREREREREREPTKLKRPAHLHHHHHHYHHQQALKIANKLRKINKEAKLTGPTGGGGAGGNTGATAATKFDKLTGDGIKNRGDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCAKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASASASISSNGSLHKRRYALALASDSSPSRLDYPKRSRGQQVPTTPTPTPLPTPLLRCSYCPKAMEFSSLEQLNAHLQQAHEQPTTEVTHAAGEESKLQANGFQLSCEYCTMRFSNIAGLFQHMRATHLDRLSSPNSYYEHFNRLATAGTFSPRLALELPAKIKPDLSSPQLEKPEQELPTDLSSNKRRTVSPPVVATTAAPAPPGVFFCNQCNAGLPDFESFRNHLKTHIAEGMQLICPHCGLSLPEQSEFERHVVAHFLIASCEFNCSAGSCGKSFAKSDELQQHLQSEHVLTLLKCALCAEICETRMAMQLHLACAHGQETKLLRCSACLELFRNDTDFHVHVKTRHQLAGNQGVAPPAPVAPGHAPGPGQTNPLQCMFCRAVCSSELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGVKEHSPPQVKDSSPNMGSLYVNALLPPLAAAAAAAAAATNNNSNLHIDYNVAFKGLFGGAGAAAPAAGKFYSPLQVDTSGLKPQQSPHPALMYGLSQRYLMEMYAAKATSPAAASASEVPSTPSQSQPSSGGATSQAAATGSSNYSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCSGNFKSRAELEQHMKSCHNSSGKYKCLICDEIFPSPAILAEHKLQHSKVGQSGKCAHCGQQLEHVAAFRAHLSEHGGDGNLPMACICCRQTLHSEFELSLHAKFHTKSSSGVGSLQEPVCALCLEPLPGAGDTAKLCDKCCRKHNLNLNGKRSKESTAPSATAAPANVAPSNYLENRCNLCKMILPHAQKLQEHLVEHTFAGTEQRGFNCYICSAVFTAPAGLLSHIAEHGARPYDCNLCPEKFYFRAELEHHQRAHELRPAAVPAAPAARVAKQETRSSSTSASASASSPIALSPRHVKQELYESETAPSPPLATEATVQDEEEYIEVEQMPLETRSSELLTTGHPERSSSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00507081;
90% Identity: iTF_00556680; iTF_00553866;
80% Identity: -