Dalb008679.1
Basic Information
- Insect
- Drosophila albomicans
- Gene Symbol
- dmd-4
- Assembly
- GCA_009650485.1
- Location
- NC:5164376-5169694[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-25 4.3e-22 77.3 8.9 1 47 15 61 15 61 0.98 2 2 0.27 8.9e+02 -0.5 0.2 23 32 274 283 266 287 0.78
Sequence Information
- Coding Sequence
- atggcaaaGTCCTTGGACAGTCAACAGCCAAAAGCCTCAAATCGTGTACCAAAATGTGCTCGATGTCGCAATCATGGCATCATTTCCGAATTACGTGGACATAAGAAACTCTGCACCTACAAGAGCTGCAAGTGCGCCAAGTGCGTGTTAATCTTCGAGCGTCAACGTATAATGGCAGCACAGGTTGCCCTGAAGCGTCAGCAGGCGGTGGAGGATGCGATTGCACTGCGTCTGGTGGCCAACAAGACGGGACGCAAGATCGATACTTTGCCGCCGGGCAGCATCTTTGGCCTAACAGTTACTAAGCCCAAGGAGCAGCAGATGCTCCTAGAGGAGGCAAAGAGTCCACAACAAGCGGATGACGAGACGAACGAGGAGCAACCGCTTCAAGAGCGGCCAGAAAAGGAAACCGAAGTAATTGCCGTCGCTCAAGATCTGAGTGCTCCACGTCGTGAGATTGTCTCGCAGACAGCCATCGATATGCTCTCGCAGCTGTTTCCGCAGCGCAAGCGATCTGTGCTTGAGTTGGTGCTGAAACGTTGTGATCTGGATTTGATACGCGCTATTGAGAACGTTTCGCCGCCAGCTGAGCAGACGACCAGCAgagagttgctgctgcccccgcctccgccgccgcctccgTTGCCACAAACCCTGCAGCTGGCGATGCCACAACGCAGCAGCGCCTTTCGACCCGTCATTGCCGAGCAGTACCCAGAGAAGTCAtcggctgcagcagctgcgatTTGCGCCTATCCCAAGTGGTTTGTGCCGCTCTCGTTTCCAGTTACCATGGGCCACCTCTCGAATCTGGCGCCTCGCTGCACGCTGCCCAACTGCAATTGCTTGGAGAGCTATCAGTTCCACTAA
- Protein Sequence
- MAKSLDSQQPKASNRVPKCARCRNHGIISELRGHKKLCTYKSCKCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVANKTGRKIDTLPPGSIFGLTVTKPKEQQMLLEEAKSPQQADDETNEEQPLQERPEKETEVIAVAQDLSAPRREIVSQTAIDMLSQLFPQRKRSVLELVLKRCDLDLIRAIENVSPPAEQTTSRELLLPPPPPPPPLPQTLQLAMPQRSSAFRPVIAEQYPEKSSAAAAAICAYPKWFVPLSFPVTMGHLSNLAPRCTLPNCNCLESYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00589561; iTF_00519180; iTF_00557934; iTF_00608459; iTF_00492976; iTF_00575603; iTF_00562487; iTF_00587415; iTF_00537528; iTF_00584440; iTF_00601817; iTF_00585217; iTF_00601816; iTF_00614203; iTF_00520647; iTF_00509115; iTF_00595261; iTF_00522975; iTF_00506884; iTF_00528825; iTF_00533822; iTF_00510560; iTF_00579296; iTF_00585984; iTF_00803616; iTF_00805200;
- 90% Identity
- iTF_00595261; iTF_00562487; iTF_00589561;
- 80% Identity
- -