Dalb002821.1
Basic Information
- Insect
- Drosophila albomicans
- Gene Symbol
- -
- Assembly
- GCA_009650485.1
- Location
- NC:17978773-17981204[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.3e-15 5.4e-12 44.8 0.0 2 45 385 428 384 428 0.95 2 3 0.051 85 2.6 0.0 28 37 458 467 457 472 0.90 3 3 1.4e-20 2.2e-17 62.0 0.0 2 42 494 534 493 536 0.96
Sequence Information
- Coding Sequence
- ATGAATCATCTCAAGTGGATGGGTCACTCGTCCACAATTATGGATATACAGCGTGTTCTGCTTAACCAGCAGAGCAACAATCAACAATGTGAAGTCCTTCTGGTAGCCAAAGATGGCATTAGTGTGCGCGCTCATCTCTTCGTGCTCAGCACATGCAGTGATCTCATGCGCAATCTACTAGTTGACTTGCCTGTCGGTCAGGAGGCCACCGTCATTCTGCCTGACATACGCGGTGAGCTACTTGAGAGCATGCTGTCGTTTATCTACATGGGCGAGACGAGTTTGCCTTCAGCGCTGCTCACCGAATTCCTGGAGGCCATTAACCTACTGGGCATTAAATCTGCCATCAGCTTTGAAACGAATCCCACAGCAATAAGCACGGCAAGTGTCGTGAGTGGTGCAATGGCTTTGGAGGCTGCCAAGTCCATAAGTGGCTTACATATTGCCAATACTACACTGATGCAGGAAgaggacgaggaggaggaagaggttGCCAATGTAGTGGTGGGCAAAATGGAAGTGAGCAACAATGTGCTGAATGatccacagcagcaacagcagcagagtcaacaacagcatcagcagcaggatGGCGCCAGATCGCTTGAGTTTCTCGATGTCTACAGTGACCAGCCGAAAATAACATATTCCATTGAGCACATGGGTGGCACATCGAGCGGCAATCAATACATTCTAACCGAGAATACGGGCACATTTACCATCACACAATCAGCATCGTCGGTGACTAAGTTGGCTGGAGCCACAACTGTTGTAGATGCTGTGACCGGCGATGAGTTGGCTGTTGATGATGCCGAggctgatgttgatgatggtgAGCACGATGAGAGTGAGTCGCATCTGATCGAAGAGCATTATGTGCCCTCGGCTGGTCCTTTGATCGAAATGAGTGGGGATGCTGATGTAGAAATGAATGAGGATGCTATGCATGAGGAGGATGTGGGTGACgtggaggatgaggaggaagATGAAGAAATAATGGATGTTAAGCCACGTAAATCGCAGTTGGACTTGAAACTGGTCAAGACCCGAGTGCAGCAACGTCCGCAGCCAGCTGCAAAGGCATCCAAAAAAACAATGAccaaacaacatcaacagttTGCAGCACTTAAAAAGGAAATCAAGGACGATATCAACGATGCACTTGAACTTGCAGCAGTTGCGGTACTCCATGAGGGTCTTAGTCTGCAGAAGGCTGCGGATCGTTTCGACATATCGAAGACAGTGTTGTGGCGTCGTGTGCGCTCCAATCCCGCCTACATGCGTATTAAGAAAGAGAAGCCATCGCTATCAGAGGCATATGAACGTCTCAAGAATGGTGATTCACTGAAGAGTATCAGCCAAGATCTGCGGATTCCTATGTCCACGTTACATCGTCACAAGGTGCGACTTGCGGCCCAAGGTCGTCTGCCCGAGTTTGTGGCTTGTCGCAGACGTGACAGCACGCCAAAGGACGAGCTACGAGAAAAGCTGGCCAAAGCGGTGCATGCCTGCATCAATGGTGGCATGTCACAGAATCATGCGGCGAATCTCTTCGAAATACCCAAGAGTACACTCTGGCGTCACTTGCAACGCCGCGTCACAGAGGCTGAACGTAAGGTCaaggaggagcaggaggaaGACGATGAGGAGGATATTTTAAGTTAA
- Protein Sequence
- MNHLKWMGHSSTIMDIQRVLLNQQSNNQQCEVLLVAKDGISVRAHLFVLSTCSDLMRNLLVDLPVGQEATVILPDIRGELLESMLSFIYMGETSLPSALLTEFLEAINLLGIKSAISFETNPTAISTASVVSGAMALEAAKSISGLHIANTTLMQEEDEEEEEVANVVVGKMEVSNNVLNDPQQQQQQSQQQHQQQDGARSLEFLDVYSDQPKITYSIEHMGGTSSGNQYILTENTGTFTITQSASSVTKLAGATTVVDAVTGDELAVDDAEADVDDGEHDESESHLIEEHYVPSAGPLIEMSGDADVEMNEDAMHEEDVGDVEDEEEDEEIMDVKPRKSQLDLKLVKTRVQQRPQPAAKASKKTMTKQHQQFAALKKEIKDDINDALELAAVAVLHEGLSLQKAADRFDISKTVLWRRVRSNPAYMRIKKEKPSLSEAYERLKNGDSLKSISQDLRIPMSTLHRHKVRLAAQGRLPEFVACRRRDSTPKDELREKLAKAVHACINGGMSQNHAANLFEIPKSTLWRHLQRRVTEAERKVKEEQEEDDEEDILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00610763;
- 90% Identity
- iTF_00589471;
- 80% Identity
- iTF_00472462;