Daff016483.1
Basic Information
- Insect
- Drosophila affinis
- Gene Symbol
- dmd-4
- Assembly
- GCA_037356375.1
- Location
- JAZHFB010000003.1:10420608-10422734[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-25 6.3e-22 77.5 9.3 1 47 42 88 42 88 0.98 2 2 0.42 2.4e+03 -1.2 0.2 23 31 313 321 305 325 0.78
Sequence Information
- Coding Sequence
- ATGGCCAGTGTCAGTGTCAGTGATGCTTCCATCAGTGAGGTGCCCAGCAAGCGTTCTCGTTTATCTGGCTCCAGCACCAAAAGCCTCAAAATAGTAGAGTCCCAGCAGCCCAAGGTCTCTAATCGAGTGCCCAAGTGCGCCCGGTGTCGTAATCATGGCATTATCTCTGAGCTGAGAGGCCACAAGAAGCTCTGCACCTACAAGAACTGCAAGTGTGCCAAGTGTGTCCTGATCTTCGAGAGGCAGCGCATTATGGCGGCTCAGGTCGCCCTGAAGCGCCAGCAGGCGGTGGAGGATGCGATTGCCATGCGTCTGGTGGCCAACAAAACGGGACGCTCCATCGATGCACTGCCGCCGGGCAACATCTTCGGCCTGACCGTCACGCAGCCGAGTTCGCCCCAACAACTCAAGGAAGATGAACAGCTGGAGAAGCCGCCAATGATGGAGGCAAggcagctacagcagcagcaacaacaggagGAACAGGAGCCGCCGGCTGTGGCTCAGGATTTGAGTGCTCCCCGACGGGAGAATGTCTCTCAGACGGCCATCGATATGCTGGCGCAGCTTTTTCCCCAAAGGAAAAGATCTGTCCTGGAACTGGTGCTCAAACGCTGCGATCTCGATTTGATACGGGCCATAGAGAATGTCTctccaacagcagcggcagcctcaACTGAGTTACCCAAATCCCAGTTGCCAATGGCAGAGACACCAATGCAAAGCCTACAGCTGGCCATGCCCCAAAGGAGCAGCGCCTTCAGGCCGGTCATAGCGGATCAGTACCCGAACAAACCCCTTATGGAGCTGAAGCCTCCAAGTGCCGCTTTTGGGGGCAACCCGTCGGCAGCTGCGGCGGCCATTTGTGCCTACCCCAAGTGGTTTGTGCCGCTATCGTTTCCGGTGACCATGGGGCACCTCTCGAACCTGGCCCCACGCTGCACGCTGCCGAATTGCGCCTGCCTCGACAGCTACCAGTTCCACTAG
- Protein Sequence
- MASVSVSDASISEVPSKRSRLSGSSTKSLKIVESQQPKVSNRVPKCARCRNHGIISELRGHKKLCTYKNCKCAKCVLIFERQRIMAAQVALKRQQAVEDAIAMRLVANKTGRSIDALPPGNIFGLTVTQPSSPQQLKEDEQLEKPPMMEARQLQQQQQQEEQEPPAVAQDLSAPRRENVSQTAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIENVSPTAAAASTELPKSQLPMAETPMQSLQLAMPQRSSAFRPVIADQYPNKPLMELKPPSAAFGGNPSAAAAAICAYPKWFVPLSFPVTMGHLSNLAPRCTLPNCACLDSYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00474514;
- 90% Identity
- iTF_00574827;
- 80% Identity
- -