Dacu018006.1
Basic Information
- Insect
- Drosophila acutilabella
- Gene Symbol
- -
- Assembly
- GCA_035046005.1
- Location
- JAWNOK010000078.1:732790-736747[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00045 0.035 14.8 0.1 1 23 167 190 167 190 0.96 2 13 0.0016 0.12 13.1 2.9 2 23 239 261 235 261 0.89 3 13 0.013 1 10.1 0.9 1 23 362 385 362 385 0.93 4 13 0.12 9.6 7.1 4.5 2 23 434 456 433 457 0.95 5 13 0.0035 0.27 12.0 0.5 1 23 525 548 525 548 0.88 6 13 2.2 1.7e+02 3.2 0.1 2 14 567 579 566 591 0.85 7 13 0.00075 0.058 14.1 3.3 2 23 599 621 599 621 0.96 8 13 0.0018 0.14 12.9 0.1 1 23 718 741 718 741 0.95 9 13 0.00012 0.0091 16.6 0.2 1 23 807 830 807 830 0.92 10 13 0.0013 0.097 13.4 2.2 2 23 880 902 879 902 0.97 11 13 0.002 0.16 12.8 2.0 1 23 993 1016 993 1016 0.92 12 13 0.057 4.4 8.2 1.5 1 21 1068 1088 1068 1089 0.95 13 13 2.4 1.8e+02 3.1 0.5 1 10 1176 1185 1176 1200 0.64
Sequence Information
- Coding Sequence
- ATGGAAGGTATGGACTTGTGGACGTCAATGTTTTCTTCTGATTTTGAGGACGGCGACGGTGATGGTGATGCGGATAATTATAATCATGGCAGCAATGCGCATGCAGACGAGTTTATGGGtgatgaggaggaggaggacgaCGACCAGGAAGGCGATATTGATGAGATTGAAGAGGGTGATGCAAGAAGACGCAAAAGAAAGTCAAAGGGACATGAGCCTGATGACGATGCcatatttgattttgaattggagCCTGTAGTTAGTATAGCTGAACCAGAAACAGAATCTGTCCGTAGAGGAACTGTTGCCTTGATGCCTCCCATGCCATCTGGACCACCCGTAAGGGGAATGCACCGTCAGTCACTACCTGCATCGTTTGGATCATCACTAATACCACGAGGATCTGGAGCTGGAGCACCTTCAACGCGGCCAACGACTTCCCAAATCAATGCCACCGATGAGAACGGAGTGCCAATTAATTATGAACTAGGTGTTATTTACATATGTCCCGCATGTGGCGCCGAGTACAGACAGCAGGACATGTGGAAACGTCATATGAACCAAATGCATCAGTACAATACGCGCAAAGGTCTCAATTTTGTAGCCATCGATAAGCTATATCATCGGTGCCTGGAGTGCAATAAGCGTATTGCGATGCACAGTCGGGAGAATCTGCTTAAACATAAGTTTACCCATTTGCCATATCGATGCACTAAGTGTTATATATGTAAGCGAGAGTACAAATACAGGCAGGACCTGATGGTGCATCTACGTATGGTGCACTGTGATGAAGTGGTAGCCATGATGCGAGAAGGCGATAGTACCGCTGGACGAAAGACACGTGTGCGTGAGCCGCGCACGGAAAGTCATTTATCTCTGCAAGCTCATGGCTCAATACCTgatgacgacaacaacagccacgACGAGGGGTTGGAGCTGGCGCATGCACATGGAGAAACAGAAGCCATAATTAAAGATGATGATCAGGTGCCGAATTCATTGGCCAAACGGAAACGAAATGATCCAAGTTCAGGCAATGGTAATAGTAGCAGCGCTGCAGACATATGTGAGGATTATATACACTACATGTGCCCGGATTGTGGCACCGATTGCGACACTCATGCCCAGTGGAGTCAGCACATTGAGTTTGTGCATGATTATGTCAGCAGAAGAGGACTCAACTTTCGGTGCGTGGACATGCAGATGCAGTGTCTGGAATGCAAACAGTTTGTGATCCCGAACACGATCAAGACACTGCGGGCTCATAAGTTTAGTCATTTGTCACAGCCTGATTGGATGCGCTGCAAGCTCTGTTACAAGGGCTATAGGGAGCACAAGGAACTCGTTAAACATCTACTTAAACAACACCATCTCGAGACTTTAATGCCCGATGGTGAGATGGAGATAGAGCGGGATGAGCCGAATCAGAGCGCCAGTATCATTGATGATGACGGGGACAAtgctggcaatggcaatgacaaTGGCTGCGATGATGAAATGCTGCACTGGGACGATGCACCACGTCGTGGCGGTCGGATTAGTAGTGATGATATGTACGAGCCACACATTGACTATCTTTGTCCACAATGCGGCAGGGAATTCATTGAGAAGAAGCATTGGCGCACCCACGTCGTCCAAGTGCACGGTATGAACGATTTGTCCAAATTGAACTTCGAGGTAATTAACGATAGACAACTGAAGTGCACCGAATGCGACAAGATCATAACGAATGCCTATGGTATTCAGAATGCACAACAGCATCGAATAACGCATCTGCCGTTCAAAGCATATGCCCGGTGTCGCAAGTGCCACAAATCCTATACGGATCGCAAGGGCTTAGTCAAACACTTGGCTACATATCATCGAGTTGGCTACGAGCCGCGTAAAGTTGCTGGACTGACCGGAGCAAATATGTCAACATCTAAAACGCCCTCACAAACGCCGCGTAAACAAATTGTCACCATAGCCAATGAAACTTATGAGATTATTTATTTGGATGAGGAGCAATCACCGCCAAGCAATAATAACATTAACGAGGAGAATGATTTCGGTGAGCAAATGCAAGCGGATGAGGATGATTGTGTCATCAGtgccaccagcagcagtagtaATCGCCCGGTGCCTCCACTTCTGGTTCCCAATCCGAATCGCTACAAGTGTGTCGATTGCGGCTCCCTGTTTCCTACACAAGTTGCGCTAAAGTCACACATCAGTGAGGAGCATGATTTCATGGATTCACAATATAGTGCCAAAAAGTTTGATAACGCCGAACCAACAAAAGGGGATGCATCTTCATCATCCACATCTGCTCAAGAGCCAGGTGTAAAGAAAACAACGCCAGCAGCCACAAGTGGCACGAAGAAAAGGACCGTGAGGATAAATAGTTCTGGTGTATCAACCATTGAGCAAAATTACATATTCCTTTGTCCGTCCTGCGGAAAAGCGTACAAAACCCAGTTCGAGTGGCGTCGTCACATCAACGATGCCCACAATTTTGATAAGCGGCAGTATTTAAACATGCGTCAGTTGGACAAGTATCGATATCAGTGTACACAATGTAAGGATATTGTAAGCAGTTCCAAACTGAAGGGTCTGCAGGATCATCATTTCCGCCATCTGCCCTATCGCCTCTATCTGAAGTGTCTCGTGTGCGGCACTTGCTACAATCATAAGCCCAACATTGCGGCACATTTGCGTACGCGGCACAACATCTTTGAACGCGATACTCCATGGCGGGAGCAGCAACCTAAACCACAGTACAATTATGTGAATATGAAAGAAAAGGAAAGCAAGGAAATAGAACCAAGGGGTATATCCTCGACATCTTCATCCCCCACAcctggcagcagcagtgccaTTAACCTTGGACGCACATTAAAGCCTCAGCCTGGTATCTTACCTACACGACCGGCGGGATTGAATACGCTGGAGGATAGCATTTCTTATCACAATGCTGTGGATCTGGACTTTATCACGTACTATTGTCCCAAGTGCAATAAGAACTTTGATTCTCATGCCTTCTGGCGCAAACACATTGTGGAACAGCATAATTTCAACAGTCGACAAGGTCTGAACTTTCGTCAAATCGATATGCATCACTACTTGTGCCTCGAGTGTTATAAGCGTGTGACTGTCACCCACACCAAGGGCGCTATTGGCCAGCTGCAGTCCCATAAGTTCCGACACTTGCCCTATCGCTCGTTCAAGTGTTTGACATGTAATGGTGAATTTGTGCGGAAACAAATGTTCTTTAAGCACTTAAATCGGGACACAAATCGATGTGACAATAAACCACATAGTGCCCAGGACAACCAGGATGATGACGTTGTGGAGCAACTGGAGAGCGTTGCTACAGTTCTAGCGCTGCCAGGAGAGGCAGATCCCACCACTTATCGCCTTTGGTGTCCACAGTGTGGTGATAAATTCATTACCGGCAGCAAAGCGCTTTGGCGTGAGCACATTAATATGTATCACGGCCTGGGCAAGCGAGATCATCTCCATATGCGAAAGTTGGGTGATGAACTGTATCGCTGCACTGACTGTGACGAGCAGCTGCAAACGAAGCAGCTGCGTGTACTGCAGGAACATCGATTCCGACATCTGCCCTATGCCGCCTATATACGCTGTCAGCTCTGCGAGCAGCAGGAGGATGAACTCGGTCATGGAGCTGTGGCAGCTGGTCTGCACAGTATGCAAGAGTTCAAGCAACACATACGCGACAATCATCCTGATGTACCTGCGGATGAAGAGCCAACACAATCACCAGACGATGAGGGCAGCCAAAAGACAAGCGACGAAGCGTCCGGGAACGGACGATATATGCCACTGCCTCCTCATTTACTGGACGATGATGTCGACGATGTGGAATTTGAGAAACAGTATCTGCTGAGTTAG
- Protein Sequence
- MEGMDLWTSMFSSDFEDGDGDGDADNYNHGSNAHADEFMGDEEEEDDDQEGDIDEIEEGDARRRKRKSKGHEPDDDAIFDFELEPVVSIAEPETESVRRGTVALMPPMPSGPPVRGMHRQSLPASFGSSLIPRGSGAGAPSTRPTTSQINATDENGVPINYELGVIYICPACGAEYRQQDMWKRHMNQMHQYNTRKGLNFVAIDKLYHRCLECNKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRMVHCDEVVAMMREGDSTAGRKTRVREPRTESHLSLQAHGSIPDDDNNSHDEGLELAHAHGETEAIIKDDDQVPNSLAKRKRNDPSSGNGNSSSAADICEDYIHYMCPDCGTDCDTHAQWSQHIEFVHDYVSRRGLNFRCVDMQMQCLECKQFVIPNTIKTLRAHKFSHLSQPDWMRCKLCYKGYREHKELVKHLLKQHHLETLMPDGEMEIERDEPNQSASIIDDDGDNAGNGNDNGCDDEMLHWDDAPRRGGRISSDDMYEPHIDYLCPQCGREFIEKKHWRTHVVQVHGMNDLSKLNFEVINDRQLKCTECDKIITNAYGIQNAQQHRITHLPFKAYARCRKCHKSYTDRKGLVKHLATYHRVGYEPRKVAGLTGANMSTSKTPSQTPRKQIVTIANETYEIIYLDEEQSPPSNNNINEENDFGEQMQADEDDCVISATSSSSNRPVPPLLVPNPNRYKCVDCGSLFPTQVALKSHISEEHDFMDSQYSAKKFDNAEPTKGDASSSSTSAQEPGVKKTTPAATSGTKKRTVRINSSGVSTIEQNYIFLCPSCGKAYKTQFEWRRHINDAHNFDKRQYLNMRQLDKYRYQCTQCKDIVSSSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNIAAHLRTRHNIFERDTPWREQQPKPQYNYVNMKEKESKEIEPRGISSTSSSPTPGSSSAINLGRTLKPQPGILPTRPAGLNTLEDSISYHNAVDLDFITYYCPKCNKNFDSHAFWRKHIVEQHNFNSRQGLNFRQIDMHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCNGEFVRKQMFFKHLNRDTNRCDNKPHSAQDNQDDDVVEQLESVATVLALPGEADPTTYRLWCPQCGDKFITGSKALWREHINMYHGLGKRDHLHMRKLGDELYRCTDCDEQLQTKQLRVLQEHRFRHLPYAAYIRCQLCEQQEDELGHGAVAAGLHSMQEFKQHIRDNHPDVPADEEPTQSPDDEGSQKTSDEASGNGRYMPLPPHLLDDDVDDVEFEKQYLLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00479030;
- 90% Identity
- iTF_00479030;
- 80% Identity
- -