Dacu002592.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila acutilabella
Gene Symbol
-
Assembly
GCA_035046005.1
Location
JAWNOK010000013.1:3974428-3976902[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.67 52 4.8 1.1 1 23 238 261 238 261 0.93
2 19 0.0012 0.092 13.5 0.4 3 23 269 289 267 289 0.97
3 19 3.9e-05 0.0031 18.1 2.2 1 23 337 359 337 359 0.99
4 19 9.6e-05 0.0075 16.9 1.1 1 23 365 387 365 387 0.97
5 19 1.5e-05 0.0011 19.5 1.9 1 23 399 421 399 421 0.98
6 19 2.3e-06 0.00018 22.0 3.1 1 23 427 450 427 450 0.95
7 19 3.7e-05 0.0029 18.2 1.8 1 23 456 478 456 478 0.97
8 19 5.6e-05 0.0044 17.6 0.6 1 23 484 506 484 506 0.92
9 19 0.00077 0.06 14.1 3.8 1 23 512 534 512 534 0.98
10 19 6.2e-05 0.0049 17.5 5.3 1 23 540 562 540 562 0.97
11 19 5.6e-05 0.0044 17.6 4.2 1 23 568 590 568 590 0.97
12 19 0.0008 0.062 14.0 0.5 1 20 596 615 596 618 0.96
13 19 0.00061 0.048 14.4 0.7 1 23 624 646 624 646 0.95
14 19 0.00057 0.044 14.5 1.6 1 23 652 674 652 674 0.97
15 19 1.9e-06 0.00014 22.3 2.1 1 23 680 702 680 702 0.99
16 19 0.001 0.08 13.7 2.1 1 23 708 730 708 730 0.96
17 19 8.2e-06 0.00064 20.3 1.2 1 23 736 758 736 758 0.98
18 19 1.1e-05 0.00084 19.9 2.2 1 23 764 786 764 786 0.98
19 19 1.7e-05 0.0014 19.2 0.7 1 23 792 814 792 814 0.99

Sequence Information

Coding Sequence
ATGGAAGAATTGTGCCGCTTTTGCACAATGCCGTGCTCCACACTTGAGAATATATTCACGGAGCGGGACCAGACGGACAACAAACCCAACCTAGTCGAAATGCTGGAGTATTGTACAGACAGAGAAATCAAGGACACGGACATGTTGCCCCATAACATATGTGGACCCTGTATGTCGGCTGCCATCAATGCATTTGAGTTCAAGCTTAGGTGCGAACAAAGCGAAACATATTTTAAGGATCTCATGAGCGAATGTAAAAAGCCTAAAATCAAGTGTGAAATGAGCAAAGCTTGTCGCTTCTGCACACTAAACTATGTAGCGCTAGAGAAAATATTCCCGGAGGGAGATAAGACTGATGATCAGAACTTGCTTATAGGCGTGCTGCAATTCTGTACAAACTGTAACATAAGCGAACTAGATGCATTGCCCAAAAACATATGTGGTCCCTGCATAGCAGCGGCAAGAAATGCATTTGAATTCAAACTAAAAAGCGAACAAAGCGAATCGTACCTAAAGGAACTCCTAATTGAACGTGAGCGAAAGCCCAATACAGATGAACTCACCACAGGGGAGTGGGGAATTACAGAGTGCGTTTTTGATGAGGAAGCAATTAAACTGGATCTCGAGGAAACTTTAGAAAACTGCTCGGAATTTAATGAGTTTGTTGCAGAAGATGTCGACGCTGGAAGCGACGTGAGCTTTAAATTGGAATTTCagtgctgcagctgctcagAACTCTTTGATAGCGAAACGCTTTTGGACAGACATACAGAATTAGCTCACGGGGGAATGGATATTTATGGCTGTTCCAGCTGCAAGGAATACTTCTCAACAAAGGAACTGCTGAAGGAGCACCAGATAGTGCACCAAGAGCTAAAGGAAGAGCACAAAGAGGAGCTCCCGGAGCACCAGGAAGATCAACTGGGAAAGCACAAGAAAGACGACCAAGAGGAACACCAAGAGGAACACcaaaaggagcagcagcaaaaaccaCTCCAAGAACGCCGCTTCAAATGTGAGCAATGCTCGATgagttttaaatacaattatttactAAAACTGCATCTCGAGACCCACTCGGAGGAGCGTCCCTACAAGTGTGAGCTCTGTTCGAAAGGGTTCAAGACCAATCTCGGACTGAGGAGGCACAAAGATATCCATGCGCTGATTAGGGAACCCAAGGACAGGCCTCGATATAAATGCAAGCGCTGCCCAAAAGTGTTCAAACATAGCTTAGACCTGACAAGTCACCTAGCTATTCATGCGGAGGACCGTCCCCACAAGTGTGAAGTCTGCGAAAAGACTTTTAAAAGACGATATGATCTGAAAATACACATGCAGTTTATACATAACATGCGGCGTAACTACCAGTGTGAGGCATGTCTGAAGGCGTTTAGAACAAAATCCCAGCTAACTAGACACTCTTATACTCACAGCGGAGATCTTAACTACAAGTGTGAGGCATGTCCGAAGGCGTTTAGAACAAAAACCGCCCTAAATAGACACTCTTATGCTCACAGCCGGGAAAGGCGCTACCATTGTGAGAACTGTTTGAAGGCATTTGGATCGCGCTTTCAGCTGCAGAAGCACCAATACACACATTCCGAGTATCGTCCCCATAAATGCGAGCAATGTCCGAGGACTTTTAAATCAAAGTACGAGGTAAAAAGACACATGCATGCGCACTCGGTGAAACGACCCTACAAATGCGACATCTGCCAAAAGACATTTAAATACTCATCACATGTAAAAGATCACAAGTTGCTGCATACGGACAGAAGAccatttaaatgtcaattctGTCCGAAGGCATATAACGCGAGAAGCGCTCTAAAAAGGCATTTACCAGACCATTACGACGAAATGCCTCATAACTGTGAGTACTGTCCGATGGCTTTTAAGACTATCGAAGAACTGAATTCCCACACTGAGAACCATGGGCAGGAACCAGCCTTCAAATGTCCCCGCTGTCCGCAGGCTTTTCACAACGAAAAGGACTTGACGCAACACAGCGATACTCATGTGGTCGTTCTGGAGTTCAAGTGTGATCAATGTCCAAAGATGTATAACACGAAGAGGTTGTTGAACAGGCACATCAAGAGCCATACCGATGAACGACTGTACAGCTGTGACGCCTGTTTCAAAGCTTTTAGAACAGTACATGAACTAAAACggcatttaatatttcatgCCAGTGATCGGGACTTTAAGTGTACGCTTTGCCCAAAAGCGTATAAAACAAAACCAGAGTTTAACAGACATCAAATCTCTCATTATTCCAATCTTTTCTATAAATGTGAGTATTGTTCGAAACcgttcaaaagcagaaatgggTTAAAACAACACACTTCGATGCATACTGACGACCGTTCCTACAAGTGTGAGCTCTGTCCGCAGGTGTACAACATAGAAAGCCAGTTCAAGAGACACATGATGACCCATGGCAGCGAATGTGAAGATGTTAAAATAGtttag
Protein Sequence
MEELCRFCTMPCSTLENIFTERDQTDNKPNLVEMLEYCTDREIKDTDMLPHNICGPCMSAAINAFEFKLRCEQSETYFKDLMSECKKPKIKCEMSKACRFCTLNYVALEKIFPEGDKTDDQNLLIGVLQFCTNCNISELDALPKNICGPCIAAARNAFEFKLKSEQSESYLKELLIERERKPNTDELTTGEWGITECVFDEEAIKLDLEETLENCSEFNEFVAEDVDAGSDVSFKLEFQCCSCSELFDSETLLDRHTELAHGGMDIYGCSSCKEYFSTKELLKEHQIVHQELKEEHKEELPEHQEDQLGKHKKDDQEEHQEEHQKEQQQKPLQERRFKCEQCSMSFKYNYLLKLHLETHSEERPYKCELCSKGFKTNLGLRRHKDIHALIREPKDRPRYKCKRCPKVFKHSLDLTSHLAIHAEDRPHKCEVCEKTFKRRYDLKIHMQFIHNMRRNYQCEACLKAFRTKSQLTRHSYTHSGDLNYKCEACPKAFRTKTALNRHSYAHSRERRYHCENCLKAFGSRFQLQKHQYTHSEYRPHKCEQCPRTFKSKYEVKRHMHAHSVKRPYKCDICQKTFKYSSHVKDHKLLHTDRRPFKCQFCPKAYNARSALKRHLPDHYDEMPHNCEYCPMAFKTIEELNSHTENHGQEPAFKCPRCPQAFHNEKDLTQHSDTHVVVLEFKCDQCPKMYNTKRLLNRHIKSHTDERLYSCDACFKAFRTVHELKRHLIFHASDRDFKCTLCPKAYKTKPEFNRHQISHYSNLFYKCEYCSKPFKSRNGLKQHTSMHTDDRSYKCELCPQVYNIESQFKRHMMTHGSECEDVKIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00569114;
90% Identity
-
80% Identity
-