Basic Information

Insect: Drosophila acutilabella
Gene Symbol: -
Assembly: GCA_035046005.1
Location: JAWNOK010000013.1:3950035-3952632[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.0017 0.13 12.9 0.6 1 23 261 284 261 284 0.97

2 21 9.4e-05 0.0073 16.9 0.9 1 23 290 313 290 313 0.91

3 21 1.7e-05 0.0013 19.3 1.0 1 23 320 342 320 342 0.96

4 21 0.00044 0.034 14.8 0.7 1 23 348 370 348 370 0.97

5 21 5.4e-07 4.2e-05 24.0 0.9 1 23 376 398 376 398 0.98

6 21 8.6e-05 0.0067 17.0 0.3 1 23 404 426 404 426 0.98

7 21 3.1e-06 0.00024 21.6 0.8 1 23 439 461 439 461 0.96

8 21 4.7e-05 0.0037 17.9 2.5 1 23 467 489 467 489 0.98

9 21 0.0046 0.36 11.6 2.0 1 23 495 517 495 517 0.97

10 21 0.00012 0.009 16.6 0.5 1 23 523 545 523 545 0.98

11 21 0.00072 0.056 14.1 2.9 1 23 551 573 551 573 0.98

12 21 9.5e-07 7.4e-05 23.2 0.5 1 23 579 601 579 601 0.99

13 21 5.4e-06 0.00042 20.8 1.7 1 23 607 629 607 629 0.98

14 21 1e-06 7.9e-05 23.1 0.3 1 23 635 657 635 657 0.99

15 21 6e-06 0.00047 20.7 3.0 1 23 663 685 663 685 0.97

16 21 5.8e-06 0.00045 20.7 0.4 1 23 691 713 691 713 0.99

17 21 0.001 0.081 13.6 0.6 1 23 720 742 720 742 0.92

18 21 0.00074 0.057 14.1 2.3 2 23 749 770 748 770 0.96

19 21 0.00018 0.014 16.0 1.1 1 23 777 799 777 799 0.94

20 21 0.00021 0.016 15.8 1.2 1 23 805 827 805 827 0.94

21 21 9.3e-05 0.0073 16.9 0.6 1 23 833 856 833 856 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.0017	0.13	12.9	0.6	1	23	261	284	261	284	0.97
2	21	9.4e-05	0.0073	16.9	0.9	1	23	290	313	290	313	0.91
3	21	1.7e-05	0.0013	19.3	1.0	1	23	320	342	320	342	0.96
4	21	0.00044	0.034	14.8	0.7	1	23	348	370	348	370	0.97
5	21	5.4e-07	4.2e-05	24.0	0.9	1	23	376	398	376	398	0.98
6	21	8.6e-05	0.0067	17.0	0.3	1	23	404	426	404	426	0.98
7	21	3.1e-06	0.00024	21.6	0.8	1	23	439	461	439	461	0.96
8	21	4.7e-05	0.0037	17.9	2.5	1	23	467	489	467	489	0.98
9	21	0.0046	0.36	11.6	2.0	1	23	495	517	495	517	0.97
10	21	0.00012	0.009	16.6	0.5	1	23	523	545	523	545	0.98
11	21	0.00072	0.056	14.1	2.9	1	23	551	573	551	573	0.98
12	21	9.5e-07	7.4e-05	23.2	0.5	1	23	579	601	579	601	0.99
13	21	5.4e-06	0.00042	20.8	1.7	1	23	607	629	607	629	0.98
14	21	1e-06	7.9e-05	23.1	0.3	1	23	635	657	635	657	0.99
15	21	6e-06	0.00047	20.7	3.0	1	23	663	685	663	685	0.97
16	21	5.8e-06	0.00045	20.7	0.4	1	23	691	713	691	713	0.99
17	21	0.001	0.081	13.6	0.6	1	23	720	742	720	742	0.92
18	21	0.00074	0.057	14.1	2.3	2	23	749	770	748	770	0.96
19	21	0.00018	0.014	16.0	1.1	1	23	777	799	777	799	0.94
20	21	0.00021	0.016	15.8	1.2	1	23	805	827	805	827	0.94
21	21	9.3e-05	0.0073	16.9	0.6	1	23	833	856	833	856	0.94

Sequence Information

Coding Sequence: ATGGATGAGGTTTGTCGCTTTTGCACGATGCCCTGCTCCACACTGGAGAACATATTCACCAGGCGCGAGCAGACGGATACTGAGCCACGCCTAGTAGTCATACTGGAGTGTTGTACCAACGACGAAATCAGCGAATCGGATTCATTGCCCCAAAATATATGTGGGCCATGTACAACGGCTGCTAAACATGCCTACGCATTCAAGCTGAGAAGTGAGCAAAGCGAAAAGCATTTTAAGAGTCTTGTGAGCAAATCTGAACAGCCCAAAATTAAGTACGAGAGGAATACAGTTTGTCGCTTCTGCACGGAGAGTTCCGCAGCGCTTGAGAAAATATTCCCTGAACGAGAACAGGTGGACAACGTACCTCTACTTATTAGTGTAGTGGAATACTGTACTAATTGTGACATAAAGGAATCGGATGCGTTGCCCCAGCATATTTGTGGTGCCTGCGTAGCGGCTGCCAGGAATGCATTCGAATTTAAGCTCAAATGTCAGCAGAGCGAAAAGTATTTTAAGGATCTGCTCATAAGCGAGCAGAAACCCAACACAGATGAACTCACCACTGGCGATTGGAGCATAACGGAATATGGGTTAGAAGGAGTCAGTATAAAGGAAGAGCAGGACGTCGCTATGGAAGAAGCTGAATTTGAGGGAAGTGAGAGAAGCTCCACAACAGAAGAATCTCATGATCCTATGGAAGAAGAAGATTCGGAGGAAAGTGAGGAAAGCTTAAAAGACGAAGTGCATAAACCAGCAACACGACTTCATTCTAAAGCGGATTTTAAGTGCTCTAGCTGCCCTATGACTTTTGGCAGAAAAGTGGTTCTTGCGCGGCACAAGCAAAGAGTTCACTTGGGAATCAAAGGTCACATCTGTCCCACGTGCAAGAAGAGCTTTTCCACAAAGAAAGTATTGATGGCTCACAGGATCGCAGAGCACGCCGATGAACCACGGCCCTACAAATGTGATATGTGCCCTAAAGGTTTCAAGACCAAAAACGAACTGAAACTGCACAATTCAGTGCATTCCGATGAACGACCCTTTCAATGTGACCTCTGCCCCAAAGCCTTCAAGCTGAACTACAGACTTACCTTACACAAGCTTATACACTCCGATGTGCGGCCCTTTCAGTGTGAGGATTGCCCCAAGGCGTTTAAATTCAAGTACAACCTGCAGCTGCACCAGGCGAGTCACTCCGACGCGCGACCCTTTCAGTGCGAGGTGTGCGCGAAAGCTTTCAAAACGAAGGCGAGATTAGCAAAACACGGCAAAATTCATTCGCTGATAAGGGAGACGACCAGTGACAAACCTCGCTACCAGTGTGAACTCTGCCCGAAGAcctttaaaactaaaatgaatttgaagCTTCACGGATCTGTGCATTCGGATGAACGACCCTTTCAGTGTGAGCTCTGCTCAAAGACCTTTAAAAGGGATTTTGCATTGAGGGATCACATGAAATTCCATTCCGACGAGCGACCGTTTAAATGTGAACACTGTCCGAGTGCTTTCAAGACCCAAACGATCTTAAACCGCCACAAAGATGTGCACAAGGACGAACGACCCTTTCAATGTGACTTCTGCCCGATGACCTTTAAGAACAAACCCGATTTGGGTAGCCATCAAACGGTTCATATGAGCGATCGTCCATTCACTTGTGAGTTCTGTTCGAGTGCCTTTAAGACCAGATCCAACATgaacaaacacaaattgtCGCACACAAACGAGCGGAATTTCAAGTGCGACGAATGCGGAAAAGCTTTCTATGCCAACAACGAACTGAACCGACATCTGCAGACGCATTCGACGGAACGACCTCACAAATGTGATATTTGCTTCAAGGGATTTAAGACGAAAATAGAGCTAAGGAGGCACATAATCATTCATTCGGAGGAACGACCCTACAAGTGTGAAGAATGCCCAAAGGCTTACAACTTAAGGAGCGAGTTAAATCGACACATTTTGACCCATTCGGGTCAAAGGCCGTACAAGTGTGATGACTGCGAGAAGACGTTCAAAAACATATCGCATTTGAATCAGCACAAGGTGATGCATTCCAACAAACGGACCTTCAAGTGTCAAATCTGCCCAAAAGCCTATAATCTGAACAGTGAGCTAAACAAGCATGTTCTGACGCATGTGGAAAGGGGCACTGGCTTCAAATGTGACCACTGTCCACAGGTCTTTAGTACCATATCTGAATTCGATATACACAGTGTGATACATGCTGACAGATCCTGCTTGAAGTGTGAACACTGCCCTATGTCATTTAATACCAAATTCGAATGGAATACGCACAGTTTGACCCATGCCGAAGAGATAACCGCCTTCAAATGTGACCATTGTCCAATGTCATTTAATTCGTTATACGATCTAAATATGCACAGTGTAATTCATGCCGACGAACCCGCCTTCCAGTGTGACCACTGTCCCATGGCTTTCAATACCACGTACGATTTGAAGACGCACAGTGTTATTCATTATAGCGAGCCTGCCTTTAAATGCGAATACTGCCCAATGACTTTTATAAGTAGTTTCGATTTAACTATTCATAGCAAATTATTACACAAACTGACAGACGACCTGGATGaggcataa
Protein Sequence: MDEVCRFCTMPCSTLENIFTRREQTDTEPRLVVILECCTNDEISESDSLPQNICGPCTTAAKHAYAFKLRSEQSEKHFKSLVSKSEQPKIKYERNTVCRFCTESSAALEKIFPEREQVDNVPLLISVVEYCTNCDIKESDALPQHICGACVAAARNAFEFKLKCQQSEKYFKDLLISEQKPNTDELTTGDWSITEYGLEGVSIKEEQDVAMEEAEFEGSERSSTTEESHDPMEEEDSEESEESLKDEVHKPATRLHSKADFKCSSCPMTFGRKVVLARHKQRVHLGIKGHICPTCKKSFSTKKVLMAHRIAEHADEPRPYKCDMCPKGFKTKNELKLHNSVHSDERPFQCDLCPKAFKLNYRLTLHKLIHSDVRPFQCEDCPKAFKFKYNLQLHQASHSDARPFQCEVCAKAFKTKARLAKHGKIHSLIRETTSDKPRYQCELCPKTFKTKMNLKLHGSVHSDERPFQCELCSKTFKRDFALRDHMKFHSDERPFKCEHCPSAFKTQTILNRHKDVHKDERPFQCDFCPMTFKNKPDLGSHQTVHMSDRPFTCEFCSSAFKTRSNMNKHKLSHTNERNFKCDECGKAFYANNELNRHLQTHSTERPHKCDICFKGFKTKIELRRHIIIHSEERPYKCEECPKAYNLRSELNRHILTHSGQRPYKCDDCEKTFKNISHLNQHKVMHSNKRTFKCQICPKAYNLNSELNKHVLTHVERGTGFKCDHCPQVFSTISEFDIHSVIHADRSCLKCEHCPMSFNTKFEWNTHSLTHAEEITAFKCDHCPMSFNSLYDLNMHSVIHADEPAFQCDHCPMAFNTTYDLKTHSVIHYSEPAFKCEYCPMTFISSFDLTIHSKLLHKLTDDLDEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00478872; iTF_00569112;
90% Identity: -
80% Identity: -