Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022325.1:67714102-67715300[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.3 3.9e+03 -0.0 0.0 26 44 159 177 152 186 0.82

2 8 1.9 5.8e+03 -0.6 0.0 24 43 185 204 164 209 0.68

3 8 0.026 79 5.4 0.0 21 43 210 232 207 237 0.91

4 8 0.0065 20 7.3 0.0 20 43 237 260 233 268 0.89

5 8 0.0024 7.3 8.7 0.2 24 48 269 292 264 297 0.81

6 8 0.0041 13 8.0 0.1 23 48 296 320 293 327 0.84

7 8 1.3 4e+03 -0.1 0.0 23 43 324 344 320 353 0.80

8 8 0.58 1.8e+03 1.1 0.1 21 44 350 373 347 376 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.3	3.9e+03	-0.0	0.0	26	44	159	177	152	186	0.82
2	8	1.9	5.8e+03	-0.6	0.0	24	43	185	204	164	209	0.68
3	8	0.026	79	5.4	0.0	21	43	210	232	207	237	0.91
4	8	0.0065	20	7.3	0.0	20	43	237	260	233	268	0.89
5	8	0.0024	7.3	8.7	0.2	24	48	269	292	264	297	0.81
6	8	0.0041	13	8.0	0.1	23	48	296	320	293	327	0.84
7	8	1.3	4e+03	-0.1	0.0	23	43	324	344	320	353	0.80
8	8	0.58	1.8e+03	1.1	0.1	21	44	350	373	347	376	0.86

Sequence Information

Coding Sequence: ATgtcttattttaatgaaatttgtttactttgtttgaacaaaggaacaaaTTTCAAGCCTGTGCAGTCAAAATATATAAACGATAtcgcaaataaattgaaatattgtcttCCTGAATACgaCGTTACTTCAGATATTCCGGAACATATTTGTGATAAATGTGAAAAtagtttgaataacttttatgaattcaaacaaaaatgcttGCAAAATATGAcagcatacaaaaaaattgctcaacatataaccacaactgacagtggAAACGAAGAATCTATAATTAAAGAAGAATCCGATGAATTAGTAATGGATGATGAATTAGAATCTTCACTGCGTGATTTGAAACAAGAACATTTCGAAAATGAAAATGCACCAGAAAATATTACTAAACATGATTGCGaagtttgtaacaaatcattcaagCTTCCGCAATATTTGAAGcaacataaacttgtacacactaaaaaatcatttaattgTAAAGTCtgcaaaaaatcattcaaacgTTCAAAAACATTAAAGGGGCATGAACATGTACACACTGGTAAAAAATCATATACTTGTGAAacttgcaacaaatcattttatCAGTTGTCGGATTTTAAGcggcataaacttatacacactggcgAAAAGCCATTcgcttgtgaagtttgcaataaaacaTTCCGATGGTCCAGTTCTTTAAAACAACATAAATTTGTACACACtagtgaaaaaccattcacgtgtgaagtttgcaataaatcattcctAGCGTCGTCAAGTTTAAAaaagcataaacttatacacactagCAATGAATTATTTACTTGTAAGATTTGCGAACAAGTATTCCGACGACTAGACACTTTAAAGAGGCAtgaacttatacacactggtgtAAAACCATAtacgtgtgaagtttgcaataaatcattccaaCAACCGGCGGATTTAAAGAGGCAtgaacttatacacactggtgtAAAACCACATGCTTGTgatatttgcaacaaatcattttatCAGTTAGGTGGTTTGAAAgagcataaacttgtacacactggtgaaaaaccatttatttgtgaagtttgcaacaaatcatacAGAAATAGGACTTCTTTGCAGTATCATATAGGTACACACAAGTGA
Protein Sequence: MSYFNEICLLCLNKGTNFKPVQSKYINDIANKLKYCLPEYDVTSDIPEHICDKCENSLNNFYEFKQKCLQNMTAYKKIAQHITTTDSGNEESIIKEESDELVMDDELESSLRDLKQEHFENENAPENITKHDCEVCNKSFKLPQYLKQHKLVHTKKSFNCKVCKKSFKRSKTLKGHEHVHTGKKSYTCETCNKSFYQLSDFKRHKLIHTGEKPFACEVCNKTFRWSSSLKQHKFVHTSEKPFTCEVCNKSFLASSSLKKHKLIHTSNELFTCKICEQVFRRLDTLKRHELIHTGVKPYTCEVCNKSFQQPADLKRHELIHTGVKPHACDICNKSFYQLGGLKEHKLVHTGEKPFICEVCNKSYRNRTSLQYHIGTHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00470239;
90% Identity: iTF_00470239;
80% Identity: iTF_00470239;