Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022325.1:42308113-42314387[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0024 7.3 8.7 0.0 22 43 236 257 225 263 0.86

2 12 0.01 31 6.7 0.6 21 43 263 285 260 290 0.92

3 12 0.11 3.4e+02 3.4 0.0 22 43 292 313 288 323 0.84

4 12 0.78 2.4e+03 0.7 0.1 23 44 321 342 318 350 0.84

5 12 0.24 7.4e+02 2.3 0.0 22 44 348 370 344 378 0.83

6 12 0.011 34 6.6 0.1 22 44 376 398 370 402 0.90

7 12 0.021 64 5.7 0.1 21 46 403 427 398 436 0.84

8 12 0.0013 4 9.6 0.5 21 43 459 481 440 487 0.88

9 12 1.2 3.6e+03 0.1 0.2 20 31 486 497 483 511 0.82

10 12 2.6 8.1e+03 -1.0 0.0 26 43 548 565 542 569 0.85

11 12 0.062 1.9e+02 4.2 0.2 20 48 570 597 560 603 0.82

12 12 0.012 36 6.5 0.4 21 49 627 654 619 658 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0024	7.3	8.7	0.0	22	43	236	257	225	263	0.86
2	12	0.01	31	6.7	0.6	21	43	263	285	260	290	0.92
3	12	0.11	3.4e+02	3.4	0.0	22	43	292	313	288	323	0.84
4	12	0.78	2.4e+03	0.7	0.1	23	44	321	342	318	350	0.84
5	12	0.24	7.4e+02	2.3	0.0	22	44	348	370	344	378	0.83
6	12	0.011	34	6.6	0.1	22	44	376	398	370	402	0.90
7	12	0.021	64	5.7	0.1	21	46	403	427	398	436	0.84
8	12	0.0013	4	9.6	0.5	21	43	459	481	440	487	0.88
9	12	1.2	3.6e+03	0.1	0.2	20	31	486	497	483	511	0.82
10	12	2.6	8.1e+03	-1.0	0.0	26	43	548	565	542	569	0.85
11	12	0.062	1.9e+02	4.2	0.2	20	48	570	597	560	603	0.82
12	12	0.012	36	6.5	0.4	21	49	627	654	619	658	0.85

Sequence Information

Coding Sequence: ATGAAAGTTGAAGACATAAAGGTGAAAAAAGAAGTAAACgtgaaaaaagaaattgaagaagttATAGTAAAAAAGGAGTATATCGATGAAAGTGACATGCAAGATACAGAAAATGAATATGCCAACAATATCTTTTTCGTGAAGGAAGAAATCAATGAAGAATTGACAACAAATTCTGATTACGACTCATTAAAGAATTGTTTGGAACTAAATAATATATCTCAACAAAATCATTCCTATaatacaaataaacaattgaaaactGAAGATATTAGATTTGATAATGTAATTGCTAATTTAGGTGTGAAGGAAGAGAATAATGGAAATTTAGTAATAAAGAAAGAATTAGATAACACTGAAAATGACAGGCAAGACGcaggaaataataatgaaaatgataaatcTTCCGTGAAGAAAGAAATTAATGAAGAgcttataataaaagaagacacAGATTTCCAGGCAAACACCCCGCAAGATAATAGTTTGGAAGCAAGCAATATATCTCAACAAGGTTCCTACAACACAAAGGAAGATTTAACAAGTGAAGATGGTGAAGAAGAAGAATATGATTCTGTGGAAGATGTTTATGACTCTAAGGAAGATGGATATGAAGTTTTAGATGCTGCAAATAAAACTGGCTTTCGAGGAGCAACTAGTATAAACAACAACAAGAAGCGACAATACAAAATCATTCAAAGTgataatgaaccaaacactTGTGATATTTGTCAGAAAACATTCACCCAGAAAAGTGATTTGAATAGACATAAACTTATTCATAGCGGTGAAAAACCATATGTTTGTAATATCtgtcaaaaatcatttataCAGAGCTGTTATTTAAAGAGACATCAAATTACTCATAGCGGTGATAAACCATATTCGTGCGATATCTGTCAAAAATCATTCGCACTTGTTGGTAATTTGAGGAAACATGAATTTACTCACAGCGGTGTGAAACCATACAGTTGTAACATCTGTCAGAAAAATTTTGCACATAGTAGCTATTTAAAGAAACACCAATTTATTCACAGCCGTGAAAAACCATACTCCTGTGATGTCTGTCAGAAAACATTCGCTGATAATGGTAATTTAAAAAGCCATAAACTTATTCATACTGGTAAAAAACCACACGAATgtaatatttgtcaaaaaaaatttgttcagaGTAGTGATTTAAAAAGACATAAACGGTATCACAGCGGTGAACGACCATACACGTGCAATATCTGTCAGAAAACATTCACTGAGAGTGGTCATTTGAAAATCCACGAACTTATTCACAGCGGTGATAAACGACACGTGTGTAATATCTGTAAGAAAAAATTTGCCCGAAATAGTGATTTAACCAAGCATATAAGGTACCACATTGGTGAGAGGCCACATGCTTGCGATATCTGCCAGAAAACATTCGTGCAAAGTTATGAATTGAAACGACACCAACTTAATCATAACAGTGAAAATCCATACTCATGTGATGTCTGCCAATATACATTTGCAGATATTGCTAGTTTAAACAGTCACAAACTTATTCATACCACCGAAAAGTCTTATTCCTGTGATGTCTGTCAGAAAACATTCGCTGATAATGACAATTTAGAAAGCCATAAACTTATTCATAGCGGTGAAAAATTATACGAATGTaacatttgtcaaaaaaaatttgttcagaATAGTGATTTGAAAAAACATAAAAGATATCACAGCGGTGAAAGACCATACGCTTGCAATGTTTGTCAGAAAACATTCATTGAGAGTGGACATTTAAGAAGCCATGAACTTATTCACAGCGGTGAAAAACGACACGTGTGTGACATCTGTGAGAAAAAATTCGCCCGAAATAGTGATTTAACCAAACATATGCGGTACCACATCGGTGAGAGGCCACATGCTTGCGATATCTGTCAGAAAACATTCATTCATAGTTATGAACTGAAGAGACACCAAGTTAATCATCTTACCAAAAAGAATTCCTTCAGAGAAGTGATTTAA
Protein Sequence: MKVEDIKVKKEVNVKKEIEEVIVKKEYIDESDMQDTENEYANNIFFVKEEINEELTTNSDYDSLKNCLELNNISQQNHSYNTNKQLKTEDIRFDNVIANLGVKEENNGNLVIKKELDNTENDRQDAGNNNENDKSSVKKEINEELIIKEDTDFQANTPQDNSLEASNISQQGSYNTKEDLTSEDGEEEEYDSVEDVYDSKEDGYEVLDAANKTGFRGATSINNNKKRQYKIIQSDNEPNTCDICQKTFTQKSDLNRHKLIHSGEKPYVCNICQKSFIQSCYLKRHQITHSGDKPYSCDICQKSFALVGNLRKHEFTHSGVKPYSCNICQKNFAHSSYLKKHQFIHSREKPYSCDVCQKTFADNGNLKSHKLIHTGKKPHECNICQKKFVQSSDLKRHKRYHSGERPYTCNICQKTFTESGHLKIHELIHSGDKRHVCNICKKKFARNSDLTKHIRYHIGERPHACDICQKTFVQSYELKRHQLNHNSENPYSCDVCQYTFADIASLNSHKLIHTTEKSYSCDVCQKTFADNDNLESHKLIHSGEKLYECNICQKKFVQNSDLKKHKRYHSGERPYACNVCQKTFIESGHLRSHELIHSGEKRHVCDICEKKFARNSDLTKHMRYHIGERPHACDICQKTFIHSYELKRHQVNHLTKKNSFREVI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00470139;
90% Identity: iTF_00470139;
80% Identity: iTF_00470139;