Dqua010924.1
Basic Information
- Insect
- Dromius quadrimaculatus
- Gene Symbol
- ATP7A
- Assembly
- GCA_963989225.1
- Location
- OZ022325.1:66877262-66899878[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.4 7.3e+03 -0.9 0.1 27 43 1356 1372 1350 1377 0.88 2 6 7.4e-06 0.023 16.7 0.3 21 43 1378 1400 1373 1405 0.90 3 6 0.0036 11 8.1 0.0 21 48 1406 1432 1403 1434 0.91 4 6 0.00011 0.33 13.0 0.1 18 44 1431 1457 1430 1461 0.88 5 6 0.00035 1.1 11.4 0.2 21 48 1462 1488 1460 1490 0.91 6 6 0.0024 7.4 8.7 0.4 18 46 1487 1515 1485 1521 0.87
Sequence Information
- Coding Sequence
- ATGGATTCAAATGTTCTCGTATTCAAATTAAAAGATGGGGTCACAAAAACGGCTCAAGAGTGGGTGGACACCAAAAAtgtattacaaaaaattgatgGGACCGTTTTGACTGATTTGAAAGATGGGCTGGAAATCAGGACAACTGAAGCAAACATGAACCTCGTCACggaAACTGCCGATTCTTTGGATCTCCACCAAATCTCAAAACCTTCTCCAGTGGGAACCATGTCGCCCTTATCCCCAACCGGTGATTATTCTTCAGTAACAACGCCCCTTTTATCAAATCAAAACAATTGCGCCACTGTAAGGATCCAAATAGAAGGAATGACTTGTCAGTCATGTGTTCGGaacattgaaaaaacaattgctGAAAAATCAGGCGTCAGTGGCATTAAAGtcaatttagaacaaaaattaggaaCAGTTGATTATGACTCAAGAGTTGTTACGCcggaaaaaattgttgattataTTGAAGAAATGGGGTTCGAGGCTGCTTTGCCCCTTTTAAATGGGGAGGAGGATGTTAGCAGCTGTGTGGTTGGAATTGAAGGGATGACGTGTAATTCTTGTGTCAGAAATATTGAAGGCATGATATCAACAAAAACAGGCATTAAAACAATTAAAGTTagtttggaaaacaaaaaagcAGACGTTTTGTTCTTTAGTGACGTCATTTCCGCAGAAAAAATTGCCGAATTAATAGATGATATGGGTTTTGATACTAATTTATTATCAGTAAATGGACGGGCAATTCAAAATGGCTCACCTTTAAGTTCAGAAATCATAAATAAAGAAAAAGGAAAAGGCAAAGCCTTGGACAAATCAGTTCCTAATAATCTTGGGGGCGGAGATGCGGGTAACTTTTCGCGTTGTGTTGTTCATATAAAAGGAATGACTTGTGGAAGTTGCGTAGCTGCTATTGAAAAACATTGTTTGAAGCTTTATGGCGTCCATGGCGTTTTAGTTGGGCTACTGGCCGCCAGGGCGGAAATCAAATATGATTCAGAGGTTATTCAGCCCCGAGATATTGCTTTAAGTATTACTGAATTGGGCTTTCCGGCTGAAATTATTGATGAACCCGGTACTGGCGAAACAGAGGTGGAGTTACATGTTAGTGGAATGACGTGTAGTTCATGCGTAAATAAAATCGAAACAACTTTATTGAAAATTCCTGGCGTTTTGACAGCTGCTGTCGCTTTAAGCACGCAAAAAGCTCGAATTAAATATGACGCGGAATTGACAGGAGTTAGGGATATTTGTGAAACGGTTAGGAAACTTGGATTTGGCGCCGAACTGTCAAATAATCGTGATAAAGACAATAGAAGTTATTTGGAACAAAAGGAAGAAATTCAGCGCTGGAGGACTGCCTTTTTAGTGTCACTGATTTTTGGTGGGCCCTGTATGTTGGCAATGGTTTATTTTATGATGCAAATGTCAGTTGGAGGTTTAAGTCACCATGATATGTGCTGTGTTGTCCCGGGTTTGAGTCTGGAGAATTTATTAATGTTTGCTTTAAGCACGCCGGTTTTGTTTTTTGGGGGGCGGCATttttatgtacaaGCATGGCGGGCATTACGTCACGGAACAACAAACATGGACCTCCTCATAACCATGACAACCACAGTATCCTACATTTATTCCCTAGGTGTATTATCAGCTGCAATGATAATGCAGCAGCCAACTTCACCCCAAACATTTTTCGATACTCCCCCAATGTTATTAGTGTTCATTTCGCTTGGTCGGTGGTTGGAACACGTTGCTAAGGGAAAAACAAGTGAAGCTCTAagcaaattattgaaattaaagccGACTGAAGCGCTCCTGGTGGAGAAAAACGGAAGTGAAAGTGTCGTTAGTGTGGATTTAGTTCAAAGAGGAGacgttttgaaaatattgcccGGAGCAAAGGTTCCGGTTGATGGCAGGGTCACTTCCGGAACTTCAACCTGCGATGAATCTTTAATAACTGGAGAATCAATGCCAGTAGCTAAACATCCTTCCAGCCTTGTGATTGGAGGCTCAATTAATCAAAATGGCGTACTTTTAATCACCGCCACTCACACAGGTGAAGCTACAACTTTGGCGCAAATTGTTCGATTAGTAGAAGAAGCACAAACCTCCAAAGCGCCTATTCAGCAACTGGCGGACCGAATTGCAGGATATTTTGTGCCTATTGTAGTGGCACTAAGTCTTACCACACTTATTGTATGGATAATTGTCGGATATGTCGACATAAATCTTCTTCCAATATCTGATCTCGCCGAGCAACAATCCGAAGGCTTCAATTCTCACGAAATAATCTTCCAATTCGTTTTTCGTTGTTCTTTATCAGTCCTAGCCATAGCTTGCCCCTGCGCACTTGGTTTAGCGACCCCAACGGCCGTTATGGTTGGTACCGGAGTTGGAGCCATAAATGGTATATTAATTAAAGGGGCGGAGCCCCTGGAAAATGCGCACAAAGTGCGGGCTGTGATGTTTGACAAGACTGGAACCATAACTCAAGGTCAGCCTTCAGTTTCCCGCATTTCTTTTATCCGTGGGCGTGGCCTAATAAACTTAGAGCTCCTATTGGCTCTTGTCGGCGTAGCCGAAACGTCATCCGAACATCCGATAGCCGCCGCAATCGTTAAATTCGTTAAAGAAGTCTTCCGGAATGATATTTTAACTAAATGTCAAGACTTTCAAGCTGTTCCTGGTTGTGGATTGAAATGTAAAGTGGATAATGTTGATGCGTTGGTAACACTGGCTCAAAAAAGTGAGGTTATGGTTAATTTCAATAATCAGACTCAAAATGAAGCGGCAGGgactttttttttgaataatgttCCGGTGGAAATTATCAGCGAAGAAAATCAGCAACAAAAGTTGGAAGAATTATTAGGAATTAATGATTTAAACACAAAATCATCCACTTCCGGTTATTCGATTCTAATCGGAAATCGGGAATGGATGCACCGGAATGGTTTGTTTTTACGGGCCGATTTAGAACACCGAATGATTAGTGAAGAAGAATTAGGACGGACGGCAGTTCTGTGCGCTATTAATGGCTGCGTGGCGGCTGTTATTTCCGTTGCGGATACAGTAAAACCGGAAGCACATTTGGCTGTATACACACTTAAAAGAATGGGGCTAGAAGTTATTCTTTTGACAGGAGATAACAGAAAAACAGCTGCCAGTATCGCCAGACAGgttGGTATTTCTCGTGTTTTTGCGGAAGTACTCCCGTCTCATAAAGTGGCGTGTGTTCAGCGACTGCAACAAACTGGAATTCGAGTTTGTATGGTCGGAGATGGAGTGAATGATTCTCCAGCTTTAGCGCAAGCTGATGTTGGTATGGCTATTGCCACCGGAACTGACGTGGCTGTTGAGGCTGCCAACGTTGTTCTTATGAGAaaTGATTTGCTGGACGTTGTGGCCTGCCTGGATCTCAGTAAAAGGACAGTCCGCCGAATCCgtatgaattttctttttgccAGCATGTACAACTTATTAGGTATTCCTTTGGCTGCGGGGGTGTTTAGCCCCTTGGGGCTGATGCTCCAGCCGTGGATGGCCTCAGCTGCGATGGCTCTGAGCAGCGTTTCTGTTGTGGGGAGCTCCCTCATGCTTAAATTATATAAAAAACCCACTAGGGAGACCCTCCAAACGCCAGAATATGTATCAGCAATTGAAGCAAGGAGACAAGCAATGGAAGAATTGGATACAATTAGTATACACCGAGGATTGGACGACATTGACCCGCCAATGATCAGAGCGAACTCCACCAGCTTATCTAGGTTTTTCACccgaaataaatcagaaaaagaAAACCATCTCTTGGGAAGTTACGACGACAATGACGAAgaattatcaatcaaatattcaaaaggcAAAATTGTGAAAAGTTTTGTGTGTAAAGAAGAGATATCGGACGAAACTCCGCAAACAGAATTAGAATTTGTGAATATAGCTGAAGATGAATTAATTATTAAGGAAGAACCATTAGACGAATTGGAAACTTTTAAGGAAGAAAATGTGCAAGTGTCAACTGAAAATGAAAATAGCGctataaaaatgtatgaatGTGAGATATGCAACAGATCATTTCGACAATTTCAGCATTTGAAAGATCACAAATTAATACACACCGGCGAAAGACCCTACACTTGTAAAGTTTGCAACAAAACATTCCGACAGTCGAGTAATCTAAAACGGCACCATTTAACGCACACTGATGAAAAACCATATAAGTGTGACGTTTGCAATGAATCATTCAGGGATGTAGGTAATTTAAAACGGCACCATTTGAGACATACTGGCGAgaaaccattcacttgtgacATTTGCAACAATTCATTTCGACAATTGAGAACTTTGAAGCAAcataaacttctacacactggcgaaaaaccacacacttgtgaagtttgtaatgaaTCGTTTAGGGATTTGAGCAATTTGAAACGGCACCATTTGAGGCACACTGGAGAAAAACCTTTTACTTGTGATGTTTGCAACGAATCGTTTAGACATTCGCGTACTCGCAAGCAACATAAAGCTCTACACACTCgtgaaaaaacaaacaaaactgGAGCGAAATGA
- Protein Sequence
- MDSNVLVFKLKDGVTKTAQEWVDTKNVLQKIDGTVLTDLKDGLEIRTTEANMNLVTETADSLDLHQISKPSPVGTMSPLSPTGDYSSVTTPLLSNQNNCATVRIQIEGMTCQSCVRNIEKTIAEKSGVSGIKVNLEQKLGTVDYDSRVVTPEKIVDYIEEMGFEAALPLLNGEEDVSSCVVGIEGMTCNSCVRNIEGMISTKTGIKTIKVSLENKKADVLFFSDVISAEKIAELIDDMGFDTNLLSVNGRAIQNGSPLSSEIINKEKGKGKALDKSVPNNLGGGDAGNFSRCVVHIKGMTCGSCVAAIEKHCLKLYGVHGVLVGLLAARAEIKYDSEVIQPRDIALSITELGFPAEIIDEPGTGETEVELHVSGMTCSSCVNKIETTLLKIPGVLTAAVALSTQKARIKYDAELTGVRDICETVRKLGFGAELSNNRDKDNRSYLEQKEEIQRWRTAFLVSLIFGGPCMLAMVYFMMQMSVGGLSHHDMCCVVPGLSLENLLMFALSTPVLFFGGRHFYVQAWRALRHGTTNMDLLITMTTTVSYIYSLGVLSAAMIMQQPTSPQTFFDTPPMLLVFISLGRWLEHVAKGKTSEALSKLLKLKPTEALLVEKNGSESVVSVDLVQRGDVLKILPGAKVPVDGRVTSGTSTCDESLITGESMPVAKHPSSLVIGGSINQNGVLLITATHTGEATTLAQIVRLVEEAQTSKAPIQQLADRIAGYFVPIVVALSLTTLIVWIIVGYVDINLLPISDLAEQQSEGFNSHEIIFQFVFRCSLSVLAIACPCALGLATPTAVMVGTGVGAINGILIKGAEPLENAHKVRAVMFDKTGTITQGQPSVSRISFIRGRGLINLELLLALVGVAETSSEHPIAAAIVKFVKEVFRNDILTKCQDFQAVPGCGLKCKVDNVDALVTLAQKSEVMVNFNNQTQNEAAGTFFLNNVPVEIISEENQQQKLEELLGINDLNTKSSTSGYSILIGNREWMHRNGLFLRADLEHRMISEEELGRTAVLCAINGCVAAVISVADTVKPEAHLAVYTLKRMGLEVILLTGDNRKTAASIARQVGISRVFAEVLPSHKVACVQRLQQTGIRVCMVGDGVNDSPALAQADVGMAIATGTDVAVEAANVVLMRNDLLDVVACLDLSKRTVRRIRMNFLFASMYNLLGIPLAAGVFSPLGLMLQPWMASAAMALSSVSVVGSSLMLKLYKKPTRETLQTPEYVSAIEARRQAMEELDTISIHRGLDDIDPPMIRANSTSLSRFFTRNKSEKENHLLGSYDDNDEELSIKYSKGKIVKSFVCKEEISDETPQTELEFVNIAEDELIIKEEPLDELETFKEENVQVSTENENSAIKMYECEICNRSFRQFQHLKDHKLIHTGERPYTCKVCNKTFRQSSNLKRHHLTHTDEKPYKCDVCNESFRDVGNLKRHHLRHTGEKPFTCDICNNSFRQLRTLKQHKLLHTGEKPHTCEVCNESFRDLSNLKRHHLRHTGEKPFTCDVCNESFRHSRTRKQHKALHTREKTNKTGAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470339;
- 90% Identity
- iTF_00470339;
- 80% Identity
- iTF_00470339;