Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: RREB1
Assembly: GCA_963989225.1
Location: OZ022328.1:33370987-33380032[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00015 0.028 16.7 1.3 1 23 73 95 73 95 0.97

2 16 0.00029 0.052 15.9 0.3 1 23 107 129 107 129 0.98

3 16 1.7e-05 0.003 19.8 4.6 1 23 135 157 135 157 0.99

4 16 2 3.7e+02 3.8 0.1 1 23 238 262 238 262 0.87

5 16 2.1 3.9e+02 3.7 3.7 5 23 271 290 268 291 0.89

6 16 0.21 39 6.9 0.3 1 20 344 363 344 365 0.94

7 16 0.3 55 6.4 0.1 1 23 505 527 505 527 0.96

8 16 9.6e-06 0.0017 20.5 0.7 1 23 537 559 537 559 0.99

9 16 0.0012 0.22 13.9 3.1 1 23 565 588 565 588 0.97

10 16 0.001 0.19 14.1 2.8 1 23 980 1003 980 1003 0.96

11 16 0.0016 0.29 13.6 1.4 2 23 1278 1299 1277 1299 0.97

12 16 0.13 24 7.5 4.2 1 23 1305 1328 1305 1328 0.96

13 16 0.16 29 7.3 4.0 1 20 1359 1379 1359 1383 0.94

14 16 1.1 2.1e+02 4.6 0.4 1 23 1454 1477 1454 1477 0.94

15 16 0.024 4.4 9.9 0.5 3 23 1527 1547 1525 1547 0.93

16 16 0.0042 0.77 12.2 5.5 1 23 1553 1575 1553 1575 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00015	0.028	16.7	1.3	1	23	73	95	73	95	0.97
2	16	0.00029	0.052	15.9	0.3	1	23	107	129	107	129	0.98
3	16	1.7e-05	0.003	19.8	4.6	1	23	135	157	135	157	0.99
4	16	2	3.7e+02	3.8	0.1	1	23	238	262	238	262	0.87
5	16	2.1	3.9e+02	3.7	3.7	5	23	271	290	268	291	0.89
6	16	0.21	39	6.9	0.3	1	20	344	363	344	365	0.94
7	16	0.3	55	6.4	0.1	1	23	505	527	505	527	0.96
8	16	9.6e-06	0.0017	20.5	0.7	1	23	537	559	537	559	0.99
9	16	0.0012	0.22	13.9	3.1	1	23	565	588	565	588	0.97
10	16	0.001	0.19	14.1	2.8	1	23	980	1003	980	1003	0.96
11	16	0.0016	0.29	13.6	1.4	2	23	1278	1299	1277	1299	0.97
12	16	0.13	24	7.5	4.2	1	23	1305	1328	1305	1328	0.96
13	16	0.16	29	7.3	4.0	1	20	1359	1379	1359	1383	0.94
14	16	1.1	2.1e+02	4.6	0.4	1	23	1454	1477	1454	1477	0.94
15	16	0.024	4.4	9.9	0.5	3	23	1527	1547	1525	1547	0.93
16	16	0.0042	0.77	12.2	5.5	1	23	1553	1575	1553	1575	0.98

Sequence Information

Coding Sequence: ATGGACGATTCGCTCAACAATACCAAAGAAAGCCAAAGAAAAAACGAAACAGGCGAAAGTATATTAGAAAGCAGTTTTTCTCTATCCGACAATCTTCAAAGCACCATATCTACCCATGAGTCTGATGTAGAGCCTATGGATATTAGCAATAAAACAGCAACAACAATCGATAGTGATAATAGTAGCGATTGCAGCTCTCCGAGCAACCCTACTAAATTCTTTTGCCCAATTTGCGACATTACTCTTACTTCTCAACATGAATTTACTTTACACATTCGTTCTCATAACAACGACAATGAAATTAATCCCGAAAAAGGTTTCACCTGTAGAATTTGCTCAAAAGTGCTTAGTTCCAGTTCAAGTTTGGACAGACACGTTCTTGTTCATAGCGGAGAGCGACCTTTTCGCTGCAAAATTTGTTTTGTGACTTTTACAACGAATGGCAATATGCATCGACATATGAGGACTCATTCGCAAAAAACAGGAGAAAACTATGAGTCTGATGCGAGTACAGATAGTAATGCTAGTGTTAATTCAATTGGGAAAACAAGAAAACGTAGattagaatttaataataacaaactgGTAGATAATAGCAATAAGAGAAAATCAGAATGTTTCATTAACGATGATGATAACTATATGCACCGCCGAAAATCCAAAAAtcttagtaataataataataatattaatgaaacaaatattcaaaaatatcattgtCCGGTATGTGACAGAGAAGATTTTGCGTCTTTAAATGTCTTAGAAACACATCTCGAAATCAATCATCCTGATTATGAAGTAAAATGCATTTCTTGCAATTTGAGTTTTAAAAATCATCGTGCTTTGAATTTGCATCGCGATATGATTCATCATACGGAACATCAgaacaatattaataataaaaatataaaaaatgccCACATTGGATTTAAAGATTTAACATTTGTTGATTTCTCAAGTAATAAATTTGCACATATTGCTCGTTATGAGTGTGAAAAAAATTTACACAAATCTGTAACaggacaaaaatttatttgtgagaAGTGTTCTAGAGCATTTCCTTGTTCCAGTGCATTAGAAATGCATCAAGatgaatgtttaaaaaataaattaatgaattatcCAACCGATTTATCTCAatcaattaaattaaacaatGATGAAGAAATACAGCGAGAAGacttttttgcacgattagatttacaaaataaatcagGTTCTAGCTCACCAGTTTCTGCAGCAGCTGTAAGTGAAGGATCAAAAATGCATGACAATAAACCTCTAATCAAATCTTCAAATGATTCCAAAGATTTAGCTAAGGATTTGGCTGATATTCAATCTATACTATCCATGACTTCAAATGGAAGTTTACTGCAACATTTACGCACTAAACCACCGTCTGAATTAATGTCTCTGCAATCTGACAGTTCGAGAAGCTCGGAGCAACATAACGAAGAAGAAACCCAAGATGCTTTTGCAGCTGAATTTAGAAAGATGAAATTACGAGGAGAATTTCCTTGTCGTCTTTGTACAGCAATTTTTCCTAATCTTCGTGCATTGAAAGGGCATAATCGTGCACATTTGACTGGCAACGGAAATTCTGGGCCGTATCGCTGCAACATGTGCCCTCATAGCTCTGTGGATAAAGCTGCTTTGATTCGACATATGCGGACACACAATGGAGACAGACCGTATGAATGTTCGCTTTGTAATTATGCTTTCACGACAAAAGCTAACTGCGAAAGACATTTGAGAAATAGGCATTCTAAAGTTACCAGAGAAGAAGTTAAAAAGTCAATCATCTACCATCCTTCAGAAGATCCAACCAATgatgaaatcaacaaaattacCTCATCTcgaaatgatataaaaaataattttttgaatacctCAAATGACGAAGACTCGCATATCAGCGATGGACTAAGTACTTCTCTTCCTGCACCAGATCACAAAAATACTTTCATCCCAGGCATTAAAATACCttcaacaattattaataaaagtgTATCCATAAATCGATCAATAATTTCCGATCATTTAAACAAAGATTCAATCAATATCAAAGAACAGACAGTTATTACGAAAGACCAAAAAATTGACTTTCCGTATACCGAAAAACTTGGATTTTGTTATCCCACAGAACTACCTGATAAACTGAAAGAAGAATTGATTCAATCTAAAATACAAGTAAAAAATTTAGATGGCTTGAAACAAATTCCTGATTATGAAGTCCAGTCTGAAGGAGAAGAAACAAACAATAACATGTCTTCAAGTTATGAGCATTATCCGAAATCATCAGGAGAGCATCCTATAGATTTGAGCATGGACGTTTTAGATTTAAGTAAAAAAAAGGAATCTCTGGCTAAACTTGATAATGAACCTCacgattttacaaaaaaaacttTAGAATCAACTCCTACCATTCCACCGTCTCCAACAGCTGCTCAGTTGTTACTGGCGCAACAATTATTGAAACATCCATATATGAATCATTTATCTCAGTTTTACCAAAATCCAACTCTTTTCCCAAATTTGCCAAGTTTAAATTTGCAGTCCAATCTATTTCCTTTTTTATTTCCTCCACCATTTTTAAATTCACAAGAAATGAAGGAAAGAATGCTTCGTTTACAATTAAGTGGTGGAACAATGATAAGCGAACAATTTCCTTCTATTAGACCTAATGGCATGCAACCATATCATCAAGAATTgtcaaatattccagaaatgaaATATCAAGTACCAAAAGTAGAAGATGATAAATCTCCTCTTCATATAAACACTCAACTTCctgataatattaataaattacatTCACCTAAACCTCAACAAAAAACTCCTGATATGATTCATAGTCCAAATTCTGTTAAAATGGTTATTAAAAACGGTGTTTTAATGCCAAAGCAAAAGCAACGACGTTACCGTACTGAAAGACCATTTTCTTGTGAACATTGTTCTGCAAGATTTACTTTAAGATCAAATATGGAACGACATATTAAACAACAACATCCCCAATTCTGGTCTCAAAGACAAAGAGCGGGAATAAGCGGAGCAGGACGGAAATCTATTAGTGCGTCTGCAACAAACATGCAAAATAATCCTAAATCATCATTTTACGACTTAAACATTCCTAACTATGACATAAATATACCAAAGATGCAAGACTCTGTAGTCACTGAAGCCaaagataaagaaataaatgttACTCAGCATCATATGTCAATCTCCCAACACGTTAAATATGCCTTGTTAGCTCAACAattaaaagcacgaaatatagATAACAACAATCCTTCCATAATAAAAGATCGCCCGTCGAATGATGACGATGAAGATGCATTGGTTATTGATGAGGAGAATGATgatgaaaaactgcaaaaatatgAGACCAAAGAAAATCTAATTCAAGCAAGAAGTATAGAAAATGATAGGAAACCAAAACCGTTTAATGAGAAAATACTTGAACTGCGCCAAATTCgcgaaaaagaaataaaaattaatgaaaaatcacAAATCGCAAGTGTGaatgaaattcatttattaaaactaTCTAAATCTGATGAAGCAGGACAagatttagtaccagtttctaGACTGCTTGATAATGCAGTGAGTACTCAGTTACCATTCCGAGAATATTTTCGCCGTGATGGAGAAGATAATGAAGGTGAAGGTGTTAGCGAAGAAGATGAAGAAGGATTAGTAGCAAGTGGTAGTACCAGCGAGGGAAACGGATCTGGCAGTGACGAAAACAAATCTGAAAACGAAACTGTGCCGACTGCTGAACCTGGAAAGAAAAGATCTGCATATTCATTAGCTCCAAATCGAGTTAGCTGCCCTTATTGTCATCGTAAATTCCCATGGACTTCTTCACTTCGTCGTCATGTATTGACTCACACTGGCCAGAAACCCTTCAAGTGCTCTCAATGTCCACTTTTATTCACAACAAAATCGAATTGTGACCGACATTTACTTCGCAAACATGGAAATACTGGAAACACCAATCAGGATtcatcaaacaataataacaataacagcCAAAATTATATGATGAGAAATGTTCCAGAGAGGCCTTACAAATGCTCAAGTTGTCCTAGTTCCACTTTTTCCACTCTTAGTAATCTCAAAAAACATATGTCTTGTAAACATACTATTGTCTCCTCAAATGCAGACAGTTTTAAGAGTGAAGAAATAAGATCACCTAGTAGAGATTATGAGAGTATGGCAAGCTCTGAAGACGAACGAGTTAGCAAACCATCAAATGACAACAAAAGTGACTGGGAGAATCAAATTTCTCATTCTAAAATACCAATCCCTTGTTTAGATCAGTCTAGTTCTGTACAAAATGCTGACTTGCCCTTCAAATGTCATTTATGTGAAGGTTCTTATGCAGAACGTCAAGATGCATTGGATCATATTCGTGATAATCATGTATCTGAGTACGAACTTTTGATGGCAAAAGGTGCTTTGGATCCAAATACATCTGGACACGATGAAGCACATTCAGCTGTTCATGATCCTGAAGATGATGAGCAACTTCGTGGCAAGTTTCCAGATTACGCAAACCGTAAAGTTATGTGTGCATTTTGCATGCGCAGATTTTGGTCAGCAGAAGATTTACGTCGACATATGAGAACTCACACAGGGGAACGACCATTTTCGTGCGATGTTTGTAACCGAAGATTCACTTTGAAACATAGCATGCTGCGACATCGGAAGAAGCACAATATGGCAACGAACTCATTGGAAGAAGGGGTACTGGTCAGTGGAGATGAAGAAATTAATTCCTCGCAAATAGTGTAtgataaattttctaaattaaataacaataataatcatGTAACTATTAATACTATAAGAGAAAAATCTACAGAAAAATCTAATAGTGAAGATTCAGAAGGAACTGAGGGGAATGATTTGATTGGAAATTTACTTGGAATTAGAGATAAATCAATTATAGACCAAGTATTAGTTTCATCTGCTGATGATGCTGCTAAATTATTAGGTGTTAATAATGGCCaagaatga
Protein Sequence: MDDSLNNTKESQRKNETGESILESSFSLSDNLQSTISTHESDVEPMDISNKTATTIDSDNSSDCSSPSNPTKFFCPICDITLTSQHEFTLHIRSHNNDNEINPEKGFTCRICSKVLSSSSSLDRHVLVHSGERPFRCKICFVTFTTNGNMHRHMRTHSQKTGENYESDASTDSNASVNSIGKTRKRRLEFNNNKLVDNSNKRKSECFINDDDNYMHRRKSKNLSNNNNNINETNIQKYHCPVCDREDFASLNVLETHLEINHPDYEVKCISCNLSFKNHRALNLHRDMIHHTEHQNNINNKNIKNAHIGFKDLTFVDFSSNKFAHIARYECEKNLHKSVTGQKFICEKCSRAFPCSSALEMHQDECLKNKLMNYPTDLSQSIKLNNDEEIQREDFFARLDLQNKSGSSSPVSAAAVSEGSKMHDNKPLIKSSNDSKDLAKDLADIQSILSMTSNGSLLQHLRTKPPSELMSLQSDSSRSSEQHNEEETQDAFAAEFRKMKLRGEFPCRLCTAIFPNLRALKGHNRAHLTGNGNSGPYRCNMCPHSSVDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHSKVTREEVKKSIIYHPSEDPTNDEINKITSSRNDIKNNFLNTSNDEDSHISDGLSTSLPAPDHKNTFIPGIKIPSTIINKSVSINRSIISDHLNKDSINIKEQTVITKDQKIDFPYTEKLGFCYPTELPDKLKEELIQSKIQVKNLDGLKQIPDYEVQSEGEETNNNMSSSYEHYPKSSGEHPIDLSMDVLDLSKKKESLAKLDNEPHDFTKKTLESTPTIPPSPTAAQLLLAQQLLKHPYMNHLSQFYQNPTLFPNLPSLNLQSNLFPFLFPPPFLNSQEMKERMLRLQLSGGTMISEQFPSIRPNGMQPYHQELSNIPEMKYQVPKVEDDKSPLHINTQLPDNINKLHSPKPQQKTPDMIHSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRAGISGAGRKSISASATNMQNNPKSSFYDLNIPNYDINIPKMQDSVVTEAKDKEINVTQHHMSISQHVKYALLAQQLKARNIDNNNPSIIKDRPSNDDDEDALVIDEENDDEKLQKYETKENLIQARSIENDRKPKPFNEKILELRQIREKEIKINEKSQIASVNEIHLLKLSKSDEAGQDLVPVSRLLDNAVSTQLPFREYFRRDGEDNEGEGVSEEDEEGLVASGSTSEGNGSGSDENKSENETVPTAEPGKKRSAYSLAPNRVSCPYCHRKFPWTSSLRRHVLTHTGQKPFKCSQCPLLFTTKSNCDRHLLRKHGNTGNTNQDSSNNNNNNSQNYMMRNVPERPYKCSSCPSSTFSTLSNLKKHMSCKHTIVSSNADSFKSEEIRSPSRDYESMASSEDERVSKPSNDNKSDWENQISHSKIPIPCLDQSSSVQNADLPFKCHLCEGSYAERQDALDHIRDNHVSEYELLMAKGALDPNTSGHDEAHSAVHDPEDDEQLRGKFPDYANRKVMCAFCMRRFWSAEDLRRHMRTHTGERPFSCDVCNRRFTLKHSMLRHRKKHNMATNSLEEGVLVSGDEEINSSQIVYDKFSKLNNNNNHVTINTIREKSTEKSNSEDSEGTEGNDLIGNLLGIRDKSIIDQVLVSSADDAAKLLGVNNGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01275656;
90% Identity: -
80% Identity: -